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Protein
Submitted name:

Predicted transcriptional regulators

Gene

Cgl2947

Organism
Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / LMG 3730 / NCIMB 10025)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulationUniRule annotation

Keywords - Ligandi

DNA-bindingUniRule annotation

Enzyme and pathway databases

BioCyciCGLU1204414-WGS:GSME-2845-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Predicted transcriptional regulatorsImported
Gene namesi
Ordered Locus Names:Cgl2947Imported
OrganismiCorynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / LMG 3730 / NCIMB 10025)Imported
Taxonomic identifieri196627 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaCorynebacterialesCorynebacteriaceaeCorynebacterium
Proteomesi
  • UP000000582 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi196627.cg3261.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2DU9X-ray2.28A1-121[»]
2EK5X-ray2.20A/B/C/D1-121[»]
ProteinModelPortaliQ8NLJ5.
SMRiQ8NLJ5. Positions 3-120.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini3 – 7169HTH gntR-type DNA-bindingInterPro annotationAdd
BLAST

Sequence similaritiesi

Contains 1 HTH gntR-type DNA-binding domain.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105KDA. Bacteria.
COG1725. LUCA.
HOGENOMiHOG000259574.
OMAiRIYSQYQ.

Family and domain databases

CDDicd07377. WHTH_GntR. 1 hit.
Gene3Di1.10.10.10. 1 hit.
InterProiIPR000524. Tscrpt_reg_HTH_GntR.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF00392. GntR. 1 hit.
[Graphical view]
SMARTiSM00345. HTH_GNTR. 1 hit.
[Graphical view]
SUPFAMiSSF46785. SSF46785. 1 hit.
PROSITEiPS50949. HTH_GNTR. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q8NLJ5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTVPLYKQIA SLIEDSIVDG TLSIDQRVPS TNELAAFHRI NPATARNGLT
60 70 80 90 100
LLVEAGILYK KRGIGMFVSA QAPALIRERR DAAFAATYVA PLIDESIHLG
110 120
FTRARIHALL DQVAESRGLY K
Length:121
Mass (Da):13,261
Last modified:October 1, 2002 - v1
Checksum:iA69A75886588BD4B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000036 Genomic DNA. Translation: BAC00341.1.
RefSeqiNP_602134.1. NC_003450.3.
WP_011015515.1. NC_006958.1.

Genome annotation databases

EnsemblBacteriaiBAC00341; BAC00341; BAC00341.
GeneIDi1020889.
KEGGicgl:NCgl2846.
PATRICi21497932. VBICorGlu203724_2874.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000036 Genomic DNA. Translation: BAC00341.1.
RefSeqiNP_602134.1. NC_003450.3.
WP_011015515.1. NC_006958.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2DU9X-ray2.28A1-121[»]
2EK5X-ray2.20A/B/C/D1-121[»]
ProteinModelPortaliQ8NLJ5.
SMRiQ8NLJ5. Positions 3-120.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi196627.cg3261.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAC00341; BAC00341; BAC00341.
GeneIDi1020889.
KEGGicgl:NCgl2846.
PATRICi21497932. VBICorGlu203724_2874.

Phylogenomic databases

eggNOGiENOG4105KDA. Bacteria.
COG1725. LUCA.
HOGENOMiHOG000259574.
OMAiRIYSQYQ.

Enzyme and pathway databases

BioCyciCGLU1204414-WGS:GSME-2845-MONOMER.

Family and domain databases

CDDicd07377. WHTH_GntR. 1 hit.
Gene3Di1.10.10.10. 1 hit.
InterProiIPR000524. Tscrpt_reg_HTH_GntR.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF00392. GntR. 1 hit.
[Graphical view]
SMARTiSM00345. HTH_GNTR. 1 hit.
[Graphical view]
SUPFAMiSSF46785. SSF46785. 1 hit.
PROSITEiPS50949. HTH_GNTR. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ8NLJ5_CORGL
AccessioniPrimary (citable) accession number: Q8NLJ5
Secondary accession number(s): Q6M1R7
Entry historyi
Integrated into UniProtKB/TrEMBL: October 1, 2002
Last sequence update: October 1, 2002
Last modified: September 7, 2016
This is version 108 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.