Unreviewed, UniProtKB/TrEMBL Q8NKR5 (Q8NKR5_9EURY)

Names and origin

Protein names

Submitted name:
    Alpha-amylase EMBL AAM48112.1

Gene names

Name:

BD5064 EMBL AAM48112.1

Organism

Thermococcus sp. GU5L5 EMBL AAM48112.1

Taxonomic identifier

195100 [NCBI]

Taxonomic lineage

Archaea › Euryarchaeota › Thermococci › Thermococcales › Thermococcaceae › Thermococcus

Protein attributes

Sequence length	461 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Inferred from homology.

Ontologies

Keywords
Domain	Signal
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	calcium ion binding Inferred from electronic annotation. Source: InterPro hydrolase activity, hydrolyzing O-glycosyl compounds Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 26	26	Potential EMBL AAM48112.1
	Chain	27 – 461	435	Potential EMBL AAM48112.1		PRO_5000063218

Sequences

	Sequence		Length	Mass (Da)
	Q8NKR5-1 [UniParc]. Last modified October 1, 2002. Version 1. Checksum: 57F0DD3AB58EDACB	FASTA	461	52,329
	10 20 30 40 50 60 MKPAKLLVFV LVVSILAGLY AQPAGAAKYL ELEEGGVIMQ AFYWDVPSGG IWWDTIRQKI 70 80 90 100 110 120 PEWYDAGISA IWIPPASKGM GGAYSMGYDP YDFFDLGEYD QKGTVETRFG SKQELVNMIN 130 140 150 160 170 180 TAHAYGIKVI ADIVINHRAG GDLEWNPFVN DYTWTDFSKV ASGKYTANYL DFHPNEVKCC 190 200 210 220 230 240 DEGTFGGFPD IAHEKSWDQY WLWASNESYA AYLRSIGVDA WRFDYVKGYG AWVVKDWLDW 250 260 270 280 290 300 WGGWAVGEYW DTNVDALLNW AYSSDAKVFD FPLYYKMDAA FDNKNIPALV EALKNGGTVV 310 320 330 340 350 360 SRDPFKAVTF VANHDTDIIW NKYPAYAFIL TYEGQPTIFY RDYEEWLNKD RLKNLIWIHD 370 380 390 400 410 420 HLAGGSTDIV YYDNDELIFV RNGYGDKPGL ITYINLGSSK AGRWVYVPKF AGACIHEYTG 430 440 450 460 NLGGWVDKWV DSSGWVYLEA PAHDPANGYY GYSVWSYCGV G

References

[1]

"A novel, high performance enzyme for starch liquefaction. Discovery and optimization of a low pH, thermostable alpha-amylase." Richardson T.H., Tan X., Frey G., Callen W., Cabell M., Lam D., Macomber J., Short J.M., Robertson D.E., Miller C. J. Biol. Chem. 277:26501-26507(2002) [PubMed: 11994309] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: GU5L5 EMBL AAM48112.1.

Cross-references

Sequence databases
EMBLGenBankDDBJ	AF504062 Genomic DNA. Translation: AAM48112.1.
3D structure databases
HSSP	HSSP built from PDB template 1MXG based on UniProtKB O08452.
SMR	Q8NKR5. Positions 27-461.
ModBase	Search...
Protein family/group databases
CAZy	GH13. Glycoside Hydrolase Family 13.
Family and domain databases
InterPro	IPR013776. A-amylase_thermo. IPR015237. DUF1939. IPR006046. Glyco_hydro_13. IPR006047. Glyco_hydro_13_cat. IPR013781. Glyco_hydro_sg_catalytic. [Graphical view]
Gene3D	G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
Pfam	PF00128. Alpha-amylase. 1 hit. PF09154. DUF1939. 1 hit. [Graphical view]
PIRSF	PIRSF001021. Alph-amls_thrmst. 1 hit.
PRINTS	PR00110. ALPHAAMYLASE.
ProtoNet	Search...

Entry information

Entry name

Q8NKR5_9EURY

Accession

Primary (citable) accession number: Q8NKR5

Entry history

Integrated into UniProtKB/TrEMBL:	October 1, 2002
Last sequence update:	October 1, 2002
Last modified:	June 16, 2009
This is version 28 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)