Q8NKR4 (Q8NKR4_9EURY) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Alpha-amylase EMBL AAM48113.1

Gene names

Name:

BD5031 EMBL AAM48113.1

Organism

Thermococcus sp. 'AEPII 1a' EMBL AAM48113.1

Taxonomic identifier

195101 [NCBI]

Taxonomic lineage

Archaea › Euryarchaeota › Thermococci › Thermococcales › Thermococcaceae › Thermococcus

Protein attributes

Sequence length	461 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Predicted

Ontologies

Keywords
Domain	Signal EMBL AAM48113.1
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	calcium ion binding Inferred from electronic annotation. Source: InterPro hydrolase activity, hydrolyzing O-glycosyl compounds Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 26	26	Potential EMBL AAM48113.1
	Chain	27 – 461	435	Potential EMBL AAM48113.1		PRO_5000063219

Sequences

	Sequence		Length	Mass (Da)
	Q8NKR4 [UniParc]. Last modified October 1, 2002. Version 1. Checksum: 17505F28DE3F6953	FASTA	461	52,378
	10 20 30 40 50 60 MKKFVALFIT MFFVVSMAVV AQPASAAKYS ELEEGGVIMQ AFYWDVPGGG IWWDTIRSKI 70 80 90 100 110 120 PEWYEAGISA IWIPPASKGM SGGYSMGYDP YDFFDLGEYN QKGTIETRFG SKQELINMIN 130 140 150 160 170 180 TAHAYGIKVI ADIVINHRAG GDLEWNPFVG DYTWTDFSKV ASGKYTANYL DFHPNEVKCC 190 200 210 220 230 240 DEGTFGGFPD IAHEKSWDQH WLWASDESYA AYLRSIGVDA WRFDYVKGYG AWVVKDWLNW 250 260 270 280 290 300 WGGWAVGEYW DTNVDALLNW AYSSGAKVFD FPLYYKMDEA FDNKNIPALV SALQNGQTVV 310 320 330 340 350 360 SRDPFKAVTF VANHDTDIIW NKYLAYAFIL TYEGQPVIFY RDYEEWLNKD RLNNLIWIHD 370 380 390 400 410 420 HLAGGSTSIV YYDSDEMIFV RNGYGSKPGL ITYINLGSSK VGRWVYVPKF AGACIHEYTG 430 440 450 460 NLGGWVDKYV YSSGWVYLEA PAYDPANGQY GYSVWSYCGV G

References

[1]	"A novel, high performance enzyme for starch liquefaction. Discovery and optimization of a low pH, thermostable alpha-amylase." Richardson T.H., Tan X., Frey G., Callen W., Cabell M., Lam D., Macomber J., Short J.M., Robertson D.E., Miller C. J. Biol. Chem. 277:26501-26507(2002) [PubMed: 11994309] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: AEPII 1a EMBL AAM48113.1.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AF504063 Genomic DNA. Translation: AAM48113.1.
3D structure databases
HSSP	HSSP built from PDB template 1MXG based on UniProtKB O08452.
ProteinModelPortal	Q8NKR4.
SMR	Q8NKR4. Positions 27-461.
ModBase	Search...
Protein family/group databases
CAZy	GH13. Glycoside Hydrolase Family 13.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Family and domain databases
InterPro	IPR013776. A-amylase_thermo. IPR015237. Alpha-amylase_C_pro. IPR015902. Alpha_amylase. IPR006046. Glyco_hydro_13. IPR013780. Glyco_hydro_13_b. IPR006047. Glyco_hydro_13_cat_dom. IPR013781. Glyco_hydro_subgr_catalytic. IPR017853. Glycoside_hydrolase_SF. [Graphical view]
Gene3D	G3DSA:2.60.40.1180. Glyco_hydro_13_b. 1 hit. G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
PANTHER	PTHR10357. Alpha_amylase. 1 hit.
Pfam	PF00128. Alpha-amylase. 1 hit. PF09154. DUF1939. 1 hit. [Graphical view]
PIRSF	PIRSF001021. Alph-amls_thrmst. 1 hit.
PRINTS	PR00110. ALPHAAMYLASE.
SUPFAM	SSF51445. Glyco_hydro_cat. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q8NKR4_9EURY

Accession

Primary (citable) accession number: Q8NKR4

Entry history

Integrated into UniProtKB/TrEMBL:	October 1, 2002
Last sequence update:	October 1, 2002
Last modified:	May 31, 2011
This is version 36 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)