Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Basket 0
(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Q8NKE1

- GLGB_RHIID

UniProt

Q8NKE1 - GLGB_RHIID

Protein

1,4-alpha-glucan-branching enzyme

Gene

GLC3

Organism
Rhizophagus irregularis (strain DAOM 181602 / DAOM 197198 / MUCL 43194) (Arbuscular mycorrhizal fungus) (Glomus intraradices)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at transcript leveli
    • BLAST
    • Align
    • Format
    • Add to basket
    • History
      Entry version 65 (01 Oct 2014)
      Sequence version 2 (19 Mar 2014)
      Previous versions | rss
    • Help video
    • Feedback
    • Comment

    Functioni

    Catalytic activityi

    Transfers a segment of a (1->4)-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain.

    Pathwayi

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Active sitei342 – 3421NucleophileBy similarity
    Active sitei397 – 3971Proton donorBy similarity

    GO - Molecular functioni

    1. 1,4-alpha-glucan branching enzyme activity Source: UniProtKB-EC
    2. cation binding Source: InterPro
    3. hydrolase activity, hydrolyzing O-glycosyl compounds Source: InterPro

    GO - Biological processi

    1. glycogen biosynthetic process Source: UniProtKB-UniPathway

    Keywords - Molecular functioni

    Glycosyltransferase, Transferase

    Keywords - Biological processi

    Glycogen biosynthesis

    Enzyme and pathway databases

    UniPathwayiUPA00164.

    Protein family/group databases

    CAZyiCBM48. Carbohydrate-Binding Module Family 48.
    GH13. Glycoside Hydrolase Family 13.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    1,4-alpha-glucan-branching enzyme (EC:2.4.1.18)
    Alternative name(s):
    Glycogen-branching enzyme
    Gene namesi
    Name:GLC3
    ORF Names:GLOINDRAFT_70859
    OrganismiRhizophagus irregularis (strain DAOM 181602 / DAOM 197198 / MUCL 43194) (Arbuscular mycorrhizal fungus) (Glomus intraradices)
    Taxonomic identifieri747089 [NCBI]
    Taxonomic lineageiEukaryotaFungiGlomeromycotaGlomeromycetesGlomeralesGlomeraceaeRhizophagus
    ProteomesiUP000018888: Unassembled WGS sequence

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 6836831,4-alpha-glucan-branching enzymePRO_0000188783Add
    BLAST

    Family & Domainsi

    Sequence similaritiesi

    Family and domain databases

    InterProiIPR006048. A-amylase_b_C.
    IPR006407. GlgB.
    IPR015902. Glyco_hydro_13.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR004193. Glyco_hydro_13_N.
    [Graphical view]
    PANTHERiPTHR10357. PTHR10357. 1 hit.
    PfamiPF00128. Alpha-amylase. 1 hit.
    PF02806. Alpha-amylase_C. 1 hit.
    PF02922. CBM_48. 1 hit.
    [Graphical view]
    PIRSFiPIRSF000463. GlgB. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q8NKE1-1 [UniParc]FASTAAdd to Basket

    « Hide

    MSPTEMISQE NYEPGICKID PWLKPFAPAI KRRLESYKKW VKEINQNEGG    50
    YDKFSRGYER FGLNVLPNGD IIYREWAPNA VAASLIGEFN DWDRSKHPMK 100
    KDSFGVWEVH IPAKNGIPTI PHNTKIKISM TTPEGECIDR LPAWIKRVTQ 150
    DLNVSLAYDA IFWNPPQKYQ WKNNSPKKPT SLRIYEAHVG ISTNEGRVGT 200
    YNEFTDNVLK RIKDLGYNAI QLMAIMEHAY YASFGYQVTS FFGVSSRYGT 250
    PEELMRLIDT AHGMGLYVLL DVVHSHACKN VLDGLNMFDG SDHCYFHEGG 300
    KGRHDLWDSR LFNYGHWEVL RFLLSNLRFF MEEYRFDGFR FDGVTSMMYH 350
    HHGIGTGFSG GYHEYFGDTV DEGGVVYLML ANDMLHKLYP RIITVSEDVS 400
    GMPGLCLPVE EGGIGFDYRL AMAIPDMWIK LLKEQRDDDW DMGNICWTLT 450
    NRRHMEKTIA YAESHDQALV GDKTLAFWLM DKEMYTHMSD MTPLTPIIDR 500
    GLALHKMIRL LTHGLGGEGY LNFEGNEFGH PEWLDFPRAG NNNSFHYARR 550
    QWNVVDDDLL RYKYLNEFDK AMQHLEEQYG WLSSPQAYIS LKHNENKLVA 600
    FERGNLLWIF NFHPTQSFAD YKIGTEWAGK YSIALNTDRK IFGGHDRIDE 650
    SISYHSQPHE WDGRKNYIQV YIPCRVALVL SHC 683
    Length:683
    Mass (Da):79,142
    Last modified:March 19, 2014 - v2
    Checksum:i0AABB4601D69D1CF
    GO

    Sequence cautioni

    The sequence AAM33305.1 differs from that shown. Reason: Frameshift at positions 474 and 483.

    Experimental Info

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Sequence conflicti474 – 48310TLAFWLMDKE → NTCLLVNGQG in AAM33305. (PubMed:12644699)Curated
    Sequence conflicti613 – 6131H → L in AAM33305. (PubMed:12644699)Curated
    Sequence conflicti678 – 6781L → P in AAM33305. (PubMed:12644699)Curated

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AF503447 mRNA. Translation: AAM33305.1. Frameshift.
    KI299226 Genomic DNA. Translation: ERZ97888.1.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AF503447 mRNA. Translation: AAM33305.1 . Frameshift.
    KI299226 Genomic DNA. Translation: ERZ97888.1 .

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protein family/group databases

    CAZyi CBM48. Carbohydrate-Binding Module Family 48.
    GH13. Glycoside Hydrolase Family 13.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Enzyme and pathway databases

    UniPathwayi UPA00164 .

    Family and domain databases

    InterProi IPR006048. A-amylase_b_C.
    IPR006407. GlgB.
    IPR015902. Glyco_hydro_13.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR004193. Glyco_hydro_13_N.
    [Graphical view ]
    PANTHERi PTHR10357. PTHR10357. 1 hit.
    Pfami PF00128. Alpha-amylase. 1 hit.
    PF02806. Alpha-amylase_C. 1 hit.
    PF02922. CBM_48. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF000463. GlgB. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Carbon export from arbuscular mycorrhizal roots involves the translocation of carbohydrate as well as lipid."
      Bago B., Pfeffer P.E., Abubaker J., Jun J., Allen J.W., Brouillette J., Douds D.D., Lammers P.J., Shachar-Hill Y.
      Plant Physiol. 131:1496-1507(2003) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [MRNA].
      Strain: DAOM 181602 / DAOM 197198 / MUCL 43194.
    2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA] OF 24-683.
      Strain: DAOM 181602 / DAOM 197198 / MUCL 43194.

    Entry informationi

    Entry nameiGLGB_RHIID
    AccessioniPrimary (citable) accession number: Q8NKE1
    Secondary accession number(s): U9SPI3
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: May 10, 2005
    Last sequence update: March 19, 2014
    Last modified: October 1, 2014
    This is version 65 of the entry and version 2 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programFungal Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Glycosyl hydrolases
      Classification of glycosyl hydrolase families and list of entries
    2. PATHWAY comments
      Index of metabolic and biosynthesis pathways
    3. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3