Unreviewed, UniProtKB/TrEMBL Q8NJK5 (Q8NJK5_ASPNG)

Names and origin

Protein names

Submitted name:
    Rhamnogalacturonan lyase A EMBL CAD36194.1

Gene names

Name:

rglA EMBL CAD36194.1

Organism

Aspergillus niger EMBL CAD36194.1

Taxonomic identifier

5061 [NCBI]

Taxonomic lineage

Eukaryota › Fungi › Dikarya › Ascomycota › Pezizomycotina › Eurotiomycetes › Eurotiomycetidae › Eurotiales › Trichocomaceae › mitosporic Trichocomaceae › Aspergillus

Protein attributes

Sequence length	499 AA.
Sequence status	Fragment.
Sequence processing	The displayed sequence is not processed.
Protein existence	Predicted.

Ontologies

Keywords
Molecular function	Lyase
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	carbohydrate binding Inferred from electronic annotation. Source: InterPro carbon-oxygen lyase activity, acting on polysaccharides Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Experimental info
	Non-terminal residue	499	1	EMBL CAD36194.1

Sequences

	Sequence		Length	Mass (Da)
	Q8NJK5-1 [UniParc]. Last modified October 1, 2002. Version 1. Checksum: 0CBD6E4A4EFB0D1E	FASTA	499	53,915
	10 20 30 40 50 60 MLSKTSLLSL LSLAAGVVNA DFGITTSDSY VINANSPNSL VFTVDRGSCD ITSIVHYGTE 70 80 90 100 110 120 LQYSGKGSHI GSGLGTATVS ATKSGDYIKV TCETDTLTQY MGVHDGDRII HMATYITEEP 130 140 150 160 170 180 SIGELRFIAR LNSDVLPNEE PFGDVSNTAD GEPIEGSDVF LVDGETRSKF YSSQRFIDDQ 190 200 210 220 230 240 RHCIAGDEHR VCMILNQYET SSGGPFHRDI NSNNGGDYNS LYWYMNSGHV QLESYRMGLH 250 260 270 280 290 300 GPYSMYFSRS GTPSTDIDTS FFADLDIEGY VAESGRGTVS GTASGADSSF DWVVHWYNDD 310 320 330 340 350 360 AQYWTYTSSS GSFTSPAMKP GTYTMVYYQG EYVVATSEVT VSAGSSTSKD ISGSVETGTT 370 380 390 400 410 420 IFKIGDWDGQ PTGFRNAENQ LRMHPSDSRM SDWGPLTYTV GSSSLTDFPM AIFKSVNSPV 430 440 450 460 470 480 TIKFTATSDQ TGAATLRIRT TLSFAGGRPQ ATINDYEGSA PSAPTNLDSR GVTRGAYRGY 490 GDVYDVSVPE GTIVEGENT

References

[1]	"Expression profiling of pectinolytic genes from Aspergillus niger." de Vries R.P., Jansen J., Aguilar G., Paenicova L., Joosten J.A.E., Wulfert F., Visser J. FEBS Lett. 530:41-47(2002) [PubMed: 12387863] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: CBS 120.49 EMBL CAD36194.1.

Cross-references

Sequence databases
EMBLGenBankDDBJ	AJ489944 Genomic DNA. Translation: CAD36194.1.
3D structure databases
SMR	Q8NJK5. Positions 22-499.
ModBase	Search...
Protein family/group databases
CAZy	PL4. Polysaccharide Lyase Family 4.
Family and domain databases
InterPro	IPR016590. Rhamnogalacturonase_B. IPR015364. RhgB_N. [Graphical view]
Pfam	PF09284. RhgB_N. 1 hit. [Graphical view]
PIRSF	PIRSF011794. Rhamnogalacturonase_B. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q8NJK5_ASPNG

Accession

Primary (citable) accession number: Q8NJK5

Entry history

Integrated into UniProtKB/TrEMBL:	October 1, 2002
Last sequence update:	October 1, 2002
Last modified:	April 14, 2009
This is version 18 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)