Q8NHQ1 (CEP70_HUMAN) Reviewed, UniProtKB/Swiss-Prot
Last modified
April 3, 2013.
Version 89.
History...
Names·Attributes·General annotation·Ontologies·Interactions·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Interactions·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Centrosomal protein of 70 kDa Short name=Cep70 Alternative name(s): p10-binding protein | ||||
| Gene names |
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| Organism | Homo sapiens (Human) [Reference proteome] | ||||
| Taxonomic identifier | 9606 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo![]() |
Protein attributes
| Sequence length | 597 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at protein level |
General annotation (Comments)
| Function | Plays a role in the organization of both preexisting and nascent microtubules in interphase cells. During mitosis, required for the organization and orientation of the mitotic spindle. |
| Subunit structure | Directly interacts with tubulin-gamma; this interaction determines centrosomal localization. Ref.7 |
| Subcellular location | Cytoplasm › cytoskeleton › centrosome. Note: Localized at the center of the radial microtubule array in interphase and at the spindle poles during various stages of mitosis. Ref.6 Ref.7 |
| Domain | The coiled-coil domains may be important for tubulin-gamma-binding and hence for centrosomal localization. |
| Sequence similarities | Contains 1 TPR repeat. |
Ontologies
| Keywords | |
|---|---|
| Cellular component | Cytoplasm Cytoskeleton |
| Coding sequence diversity | Alternative splicing Polymorphism |
| Domain | Coiled coil TPR repeat |
| Technical term | Complete proteome Reference proteome |
| Gene Ontology (GO) | |
| Biological_process | G2/M transition of mitotic cell cycle Traceable author statement. Source: Reactome |
| Cellular_component | centrosome Inferred from direct assay PubMed 21399614. Source: UniProtKB cytosolTraceable author statement. Source: Reactome nuclear membraneInferred from direct assay. Source: HPA |
| Complete GO annotation... | |
Binary interactions
With | Entry | #Exp. | IntAct | Notes |
|---|---|---|---|---|
| COIL | P38432 | 3 | EBI-739624,EBI-945751 | |
| NRIP1 | P48552 | 3 | EBI-739624,EBI-746484 | |
| ZNF408 | Q9H9D4 | 3 | EBI-739624,EBI-347633 |
Alternative products
| This entry describes 5 isoforms produced by alternative splicing. [Align] [Select] | ||||||
| Isoform 1 (identifier: Q8NHQ1-1) This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry. | ||||||
| Isoform 2 (identifier: Q8NHQ1-2) The sequence of this isoform differs from the canonical sequence as follows: 551-554: SIIY → RYLF 555-597: Missing. | ||||||
| Isoform 3 (identifier: Q8NHQ1-3) The sequence of this isoform differs from the canonical sequence as follows: 213-597: Missing. | ||||||
| Isoform 4 (identifier: Q8NHQ1-4) The sequence of this isoform differs from the canonical sequence as follows: 1-18: Missing. | ||||||
| Note: No experimental confirmation available. | ||||||
| Isoform 5 (identifier: Q8NHQ1-5) The sequence of this isoform differs from the canonical sequence as follows: 1-18: Missing. 22-23: Missing. | ||||||
| Note: No experimental confirmation available. |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 597 | 597 | Centrosomal protein of 70 kDa | PRO_0000089497 | |||||
Regions | |||||||||
| Repeat | 483 – 516 | 34 | TPR | ||||||
| Coiled coil | 75 – 179 | 105 | Potential | ||||||
| Coiled coil | 254 – 326 | 73 | Potential | ||||||
Natural variations | |||||||||
| Alternative sequence | 1 – 18 | 18 | Missing in isoform 4 and isoform 5. | VSP_042140 | |||||
| Alternative sequence | 22 – 23 | 2 | Missing in isoform 5. | VSP_042141 | |||||
| Alternative sequence | 213 – 597 | 385 | Missing in isoform 3. | VSP_012745 | |||||
| Alternative sequence | 551 – 554 | 4 | SIIY → RYLF in isoform 2. | VSP_012746 | |||||
| Alternative sequence | 555 – 597 | 43 | Missing in isoform 2. | VSP_012747 | |||||
| Natural variant | 135 | 1 | S → N. Ref.2 Ref.4 Ref.5 Corresponds to variant rs1673607 [ dbSNP | Ensembl ]. | VAR_021177 | |||||
| Natural variant | 537 | 1 | N → S. Corresponds to variant rs35340237 [ dbSNP | Ensembl ]. | VAR_061590 | |||||
Experimental info | |||||||||
| Sequence conflict | 52 | 1 | Missing in BAB14403. Ref.2 | ||||||
| Sequence conflict | 293 | 1 | Q → L in BAH12924. Ref.2 | ||||||
| Sequence conflict | 371 | 1 | Q → R in BAB14403. Ref.2 | ||||||
| Sequence conflict | 385 | 1 | Q → R in BAH13584. Ref.2 | ||||||
| Sequence conflict | 393 | 1 | V → A in BAH13584. Ref.2 | ||||||
| Sequence conflict | 471 | 1 | S → P in AAG35616. Ref.1 | ||||||
| Sequence conflict | 471 | 1 | S → P in AAG35791. Ref.1 | ||||||
| Sequence conflict | 478 | 1 | D → G in AAG35616. Ref.1 | ||||||
| Sequence conflict | 478 | 1 | D → G in AAG35791. Ref.1 | ||||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "Cloning and characterization of BITE: a binding partner of the cell cycle inhibitor p10." Tschan M.P., Cajot J.-F., Grob T.J., Fey M.F., Tobler A. Submitted (NOV-1999) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORMS 1 AND 2). Tissue: Chronic myeloid leukemia cell. |
| [2] | "Complete sequencing and characterization of 21,243 full-length human cDNAs." Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S. Sugano S.Nat. Genet. 36:40-45(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA] (ISOFORMS 1; 4 AND 5), VARIANT ASN-135. Tissue: Teratocarcinoma and Testis. |
| [3] | "The DNA sequence, annotation and analysis of human chromosome 3." Muzny D.M., Scherer S.E., Kaul R., Wang J., Yu J., Sudbrak R., Buhay C.J., Chen R., Cree A., Ding Y., Dugan-Rocha S., Gill R., Gunaratne P., Harris R.A., Hawes A.C., Hernandez J., Hodgson A.V., Hume J. Gibbs R.A.Nature 440:1194-1198(2006) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [4] | Mural R.J., Istrail S., Sutton G.G., Florea L., Halpern A.L., Mobarry C.M., Lippert R., Walenz B., Shatkay H., Dew I., Miller J.R., Flanigan M.J., Edwards N.J., Bolanos R., Fasulo D., Halldorsson B.V., Hannenhalli S., Turner R. Venter J.C.Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA], VARIANT ASN-135. |
| [5] | "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA] (ISOFORMS 1 AND 3), VARIANT ASN-135. Tissue: Skin and Testis. |
| [6] | "Proteomic characterization of the human centrosome by protein correlation profiling." Andersen J.S., Wilkinson C.J., Mayor T., Mortensen P., Nigg E.A., Mann M. Nature 426:570-574(2003) [PubMed] [Europe PMC] [Abstract] Cited for: MASS SPECTROMETRY, SUBCELLULAR LOCATION [LARGE SCALE ANALYSIS]. Tissue: Lymphoblast. |
| [7] | "CEP70 protein interacts with gamma-tubulin to localize at the centrosome and is critical for mitotic spindle assembly." Shi X., Sun X., Liu M., Li D., Aneja R., Zhou J. J. Biol. Chem. 286:33401-33408(2011) [PubMed] [Europe PMC] [Abstract] Cited for: SUBCELLULAR LOCATION, INTERACTION WITH TUBULIN-GAMMA. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | AF202146 mRNA. Translation: AAG35616.1. AF289495 mRNA. Translation: AAG35791.1. AK023098 mRNA. Translation: BAB14403.1. AK299003 mRNA. Translation: BAH12924.1. AK301913 mRNA. Translation: BAH13584.1. AC020890 Genomic DNA. No translation available. AC072045 Genomic DNA. No translation available. CH471052 Genomic DNA. Translation: EAW79062.1. CH471052 Genomic DNA. Translation: EAW79063.1. BC016050 mRNA. Translation: AAH16050.1. BC030598 mRNA. Translation: AAH30598.1. |
| IPI | IPI00304022. IPI00549676. IPI00549791. |
| RefSeq | NP_077817.2. NM_024491.2. |
| UniGene | Hs.531962. |
3D structure databases | |
| ProteinModelPortal | Q8NHQ1. |
| ModBase | Search... |
Protein-protein interaction databases | |
| IntAct | Q8NHQ1. 24 interactions. |
| MINT | MINT-1446081. |
| STRING | 9606.ENSP00000264982. |
PTM databases | |
| PhosphoSite | Q8NHQ1. |
Polymorphism databases | |
| DMDM | 84028943. |
Proteomic databases | |
| PaxDb | Q8NHQ1. |
| PRIDE | Q8NHQ1. |
Protocols and materials databases | |
| DNASU | 80321. |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| Ensembl | ENST00000264982; ENSP00000264982; ENSG00000114107. ENST00000464035; ENSP00000419743; ENSG00000114107. ENST00000474781; ENSP00000419833; ENSG00000114107. ENST00000481834; ENSP00000417465; ENSG00000114107. ENST00000484888; ENSP00000419231; ENSG00000114107. ENST00000542237; ENSP00000444128; ENSG00000114107. |
| GeneID | 80321. |
| KEGG | hsa:80321. |
| UCSC | uc003esl.3. human. uc003esm.3. human. uc003esn.3. human. |
Organism-specific databases | |
| CTD | 80321. |
| GeneCards | GC03M138213. |
| H-InvDB | HIX0018484. |
| HGNC | HGNC:29972. CEP70. |
| HPA | HPA036941. HPA036942. |
| MIM | 614310. gene. |
| neXtProt | NX_Q8NHQ1. |
| PharmGKB | PA128394729. |
| GenAtlas | Search... |
Phylogenomic databases | |
| eggNOG | NOG68751. |
| HOGENOM | HOG000290163. |
| HOVERGEN | HBG050899. |
| InParanoid | Q8NHQ1. |
| KO | K16802. |
| OMA | NEGIKVE. |
| OrthoDB | EOG42V8GH. |
| PhylomeDB | Q8NHQ1. |
Enzyme and pathway databases | |
| Reactome | REACT_115566. Cell Cycle. |
Gene expression databases | |
| ArrayExpress | Q8NHQ1. |
| Bgee | Q8NHQ1. |
| CleanEx | HS_CEP70. |
| Genevestigator | Q8NHQ1. |
| GermOnline | ENSG00000114107. Homo sapiens. |
Family and domain databases | |
| InterPro | IPR013026. TPR-contain_dom. IPR019734. TPR_repeat. [Graphical view] |
| PROSITE | PS50005. TPR. 1 hit. PS50293. TPR_REGION. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Other | |
| GenomeRNAi | 80321. |
| NextBio | 70839. |
| SOURCE | Search... |
Entry information
| Entry name | CEP70_HUMAN | ||||||||
| Accession | Primary (citable) accession number: Q8NHQ1 Secondary accession number(s): B7Z5I8 Q9H940 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Chordata Protein Annotation Program | ||||||||
| Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. | ||||||||
Relevant documents
| Recent format changes Overview of recent format changes |
| Human chromosome 3 Human chromosome 3: entries, gene names and cross-references to MIM |
| Human entries with polymorphisms or disease mutations List of human entries with polymorphisms or disease mutations |
| Human polymorphisms and disease mutations Index of human polymorphisms and disease mutations |
| MIM cross-references Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot |
| SIMILARITY comments Index of protein domains and families |

Clusters with
