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Q8NH56

- O52N5_HUMAN

UniProt

Q8NH56 - O52N5_HUMAN

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Protein

Olfactory receptor 52N5

Gene
OR52N5
Organism
Homo sapiens (Human)
Status
Reviewed - Annotation score: 3 out of 5 - Experimental evidence at transcript leveli

Functioni

Odorant receptor Reviewed prediction.

GO - Molecular functioni

  1. G-protein coupled receptor activity Source: UniProtKB-KW
  2. olfactory receptor activity Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

G-protein coupled receptor, Receptor, Transducer

Keywords - Biological processi

Olfaction, Sensory transduction

Enzyme and pathway databases

ReactomeiREACT_15488. Olfactory Signaling Pathway.

Names & Taxonomyi

Protein namesi
Recommended name:
Olfactory receptor 52N5
Alternative name(s):
Olfactory receptor OR11-62
Gene namesi
Name:OR52N5
OrganismiHomo sapiens (Human)
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
ProteomesiUP000005640: Chromosome 11

Organism-specific databases

HGNCiHGNC:15231. OR52N5.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Topological domaini1 – 3333Extracellular Reviewed predictionAdd
BLAST
Transmembranei34 – 5421Helical; Name=1; Reviewed predictionAdd
BLAST
Topological domaini55 – 628Cytoplasmic Reviewed prediction
Transmembranei63 – 8422Helical; Name=2; Reviewed predictionAdd
BLAST
Topological domaini85 – 10824Extracellular Reviewed predictionAdd
BLAST
Transmembranei109 – 12921Helical; Name=3; Reviewed predictionAdd
BLAST
Topological domaini130 – 14819Cytoplasmic Reviewed predictionAdd
BLAST
Transmembranei149 – 16921Helical; Name=4; Reviewed predictionAdd
BLAST
Topological domaini170 – 20536Extracellular Reviewed predictionAdd
BLAST
Transmembranei206 – 22621Helical; Name=5; Reviewed predictionAdd
BLAST
Topological domaini227 – 24620Cytoplasmic Reviewed predictionAdd
BLAST
Transmembranei247 – 26721Helical; Name=6; Reviewed predictionAdd
BLAST
Topological domaini268 – 28316Extracellular Reviewed predictionAdd
BLAST
Transmembranei284 – 30421Helical; Name=7; Reviewed predictionAdd
BLAST
Topological domaini305 – 32420Cytoplasmic Reviewed predictionAdd
BLAST

GO - Cellular componenti

  1. integral component of membrane Source: UniProtKB-KW
  2. plasma membrane Source: Reactome
Complete GO annotation...

Keywords - Cellular componenti

Cell membrane, Membrane

Pathology & Biotechi

Organism-specific databases

PharmGKBiPA32429.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 324324Olfactory receptor 52N5PRO_0000150789Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Disulfide bondi106 ↔ 198 By similarity

Keywords - PTMi

Disulfide bond

Proteomic databases

PaxDbiQ8NH56.
PRIDEiQ8NH56.

Expressioni

Gene expression databases

CleanExiHS_OR52N5.
GenevestigatoriQ8NH56.

Interactioni

Protein-protein interaction databases

STRINGi9606.ENSP00000322866.

Structurei

3D structure databases

ProteinModelPortaliQ8NH56.

Family & Domainsi

Sequence similaritiesi

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiNOG68125.
HOGENOMiHOG000041363.
HOVERGENiHBG017625.
InParanoidiQ8NH56.
KOiK04257.
OMAiLIYYEES.
OrthoDBiEOG754HPV.
PhylomeDBiQ8NH56.
TreeFamiTF343679.

Family and domain databases

Gene3Di1.20.1070.10. 1 hit.
InterProiIPR000276. GPCR_Rhodpsn.
IPR017452. GPCR_Rhodpsn_7TM.
IPR000725. Olfact_rcpt.
[Graphical view]
PRINTSiPR00245. OLFACTORYR.
PROSITEiPS00237. G_PROTEIN_RECEP_F1_1. 1 hit.
PS50262. G_PROTEIN_RECEP_F1_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q8NH56-1 [UniParc]FASTAAdd to Basket

« Hide

MPLFNSLCWF PTIHVTPPSF ILNGIPGLER VHVWISLPLC TMYIIFLVGN    50
LGLVYLIYYE ESLHHPMYFF FGHALSLIDL LTCTTTLPNA LCIFWFSLKE 100
INFNACLAQM FFVHGFTGVE SGVLMLMALD RYVAICYPLR YATTLTNPII 150
AKAELATFLR GVLLMIPFPF LVKRLPFCQS NIISHTYCDH MSVVKLSCAS 200
IKVNVIYGLM VALLIGVFDI CCISLSYTLI LKAAISLSSS DARQKAFSTC 250
TAHISAIIIT YVPAFFTFFA HRFGGHTIPP SLHIIVANLY LLLPPTLNPI 300
VYGVKTKQIR KSVIKFFQGD KGAG 324
Length:324
Mass (Da):36,212
Last modified:November 4, 2008 - v2
Checksum:i71FAC1869435A50F
GO

Natural variant

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Natural varianti133 – 1331V → I.1 Publication
Corresponds to variant rs12360738 [ dbSNP | Ensembl ].
VAR_047147

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AB065535 Genomic DNA. Translation: BAC05781.1.
CH471064 Genomic DNA. Translation: EAW68762.1.
BC136979 mRNA. Translation: AAI36980.1.
BC136981 mRNA. Translation: AAI36982.1.
BK004300 Genomic DNA. Translation: DAA04698.1.
CCDSiCCDS31397.1.
RefSeqiNP_001001922.2. NM_001001922.2.
UniGeneiHs.690207.

Genome annotation databases

EnsembliENST00000317093; ENSP00000322866; ENSG00000181009.
GeneIDi390075.
KEGGihsa:390075.
UCSCiuc010qzn.2. human.

Polymorphism databases

DMDMi212276449.

Keywords - Coding sequence diversityi

Polymorphism

Cross-referencesi

Web resourcesi

Human Olfactory Receptor Data Exploratorium (HORDE)

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AB065535 Genomic DNA. Translation: BAC05781.1 .
CH471064 Genomic DNA. Translation: EAW68762.1 .
BC136979 mRNA. Translation: AAI36980.1 .
BC136981 mRNA. Translation: AAI36982.1 .
BK004300 Genomic DNA. Translation: DAA04698.1 .
CCDSi CCDS31397.1.
RefSeqi NP_001001922.2. NM_001001922.2.
UniGenei Hs.690207.

3D structure databases

ProteinModelPortali Q8NH56.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 9606.ENSP00000322866.

Protein family/group databases

GPCRDBi Search...

Polymorphism databases

DMDMi 212276449.

Proteomic databases

PaxDbi Q8NH56.
PRIDEi Q8NH56.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENST00000317093 ; ENSP00000322866 ; ENSG00000181009 .
GeneIDi 390075.
KEGGi hsa:390075.
UCSCi uc010qzn.2. human.

Organism-specific databases

CTDi 390075.
GeneCardsi GC11M005755.
HGNCi HGNC:15231. OR52N5.
neXtProti NX_Q8NH56.
PharmGKBi PA32429.
GenAtlasi Search...

Phylogenomic databases

eggNOGi NOG68125.
HOGENOMi HOG000041363.
HOVERGENi HBG017625.
InParanoidi Q8NH56.
KOi K04257.
OMAi LIYYEES.
OrthoDBi EOG754HPV.
PhylomeDBi Q8NH56.
TreeFami TF343679.

Enzyme and pathway databases

Reactomei REACT_15488. Olfactory Signaling Pathway.

Miscellaneous databases

GeneWikii OR52N5.
GenomeRNAii 390075.
NextBioi 103355.
PROi Q8NH56.

Gene expression databases

CleanExi HS_OR52N5.
Genevestigatori Q8NH56.

Family and domain databases

Gene3Di 1.20.1070.10. 1 hit.
InterProi IPR000276. GPCR_Rhodpsn.
IPR017452. GPCR_Rhodpsn_7TM.
IPR000725. Olfact_rcpt.
[Graphical view ]
PRINTSi PR00245. OLFACTORYR.
PROSITEi PS00237. G_PROTEIN_RECEP_F1_1. 1 hit.
PS50262. G_PROTEIN_RECEP_F1_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Genome-wide discovery and analysis of human seven transmembrane helix receptor genes."
    Suwa M., Sato T., Okouchi I., Arita M., Futami K., Matsumoto S., Tsutsumi S., Aburatani H., Asai K., Akiyama Y.
    Submitted (JUL-2001) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA], VARIANT ILE-133.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
  3. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: Testis.
  4. Cited for: IDENTIFICATION.
  5. Erratum
    Malnic B., Godfrey P.A., Buck L.B.
    Proc. Natl. Acad. Sci. U.S.A. 101:7205-7205(2004)

Entry informationi

Entry nameiO52N5_HUMAN
AccessioniPrimary (citable) accession number: Q8NH56
Secondary accession number(s): B9EH12, Q6IFG2
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 10, 2003
Last sequence update: November 4, 2008
Last modified: September 3, 2014
This is version 97 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. 7-transmembrane G-linked receptors
    List of 7-transmembrane G-linked receptor entries
  2. Human chromosome 11
    Human chromosome 11: entries, gene names and cross-references to MIM
  3. Human entries with polymorphisms or disease mutations
    List of human entries with polymorphisms or disease mutations
  4. Human polymorphisms and disease mutations
    Index of human polymorphisms and disease mutations
  5. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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