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Q8NGV0

- OR2Y1_HUMAN

UniProt

Q8NGV0 - OR2Y1_HUMAN

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Protein
Olfactory receptor 2Y1
Gene
OR2Y1
Organism
Homo sapiens (Human)
Status
Reviewed - Annotation score: 3 out of 5 - Experimental evidence at transcript leveli

Functioni

Odorant receptor Reviewed prediction.

GO - Molecular functioni

  1. G-protein coupled receptor activity Source: UniProtKB-KW
  2. olfactory receptor activity Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

G-protein coupled receptor, Receptor, Transducer

Keywords - Biological processi

Olfaction, Sensory transduction

Enzyme and pathway databases

ReactomeiREACT_15488. Olfactory Signaling Pathway.

Names & Taxonomyi

Protein namesi
Recommended name:
Olfactory receptor 2Y1
Alternative name(s):
Olfactory receptor OR5-2
Gene namesi
Name:OR2Y1
OrganismiHomo sapiens (Human)
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
ProteomesiUP000005640: Chromosome 5

Organism-specific databases

HGNCiHGNC:14837. OR2Y1.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Topological domaini1 – 2525Extracellular Reviewed prediction
Add
BLAST
Transmembranei26 – 4924Helical; Name=1; Reviewed prediction
Add
BLAST
Topological domaini50 – 578Cytoplasmic Reviewed prediction
Transmembranei58 – 7922Helical; Name=2; Reviewed prediction
Add
BLAST
Topological domaini80 – 10021Extracellular Reviewed prediction
Add
BLAST
Transmembranei101 – 12020Helical; Name=3; Reviewed prediction
Add
BLAST
Topological domaini121 – 13919Cytoplasmic Reviewed prediction
Add
BLAST
Transmembranei140 – 15819Helical; Name=4; Reviewed prediction
Add
BLAST
Topological domaini159 – 19436Extracellular Reviewed prediction
Add
BLAST
Transmembranei195 – 21824Helical; Name=5; Reviewed prediction
Add
BLAST
Topological domaini219 – 23517Cytoplasmic Reviewed prediction
Add
BLAST
Transmembranei236 – 25823Helical; Name=6; Reviewed prediction
Add
BLAST
Topological domaini259 – 27113Extracellular Reviewed prediction
Add
BLAST
Transmembranei272 – 29120Helical; Name=7; Reviewed prediction
Add
BLAST
Topological domaini292 – 31120Cytoplasmic Reviewed prediction
Add
BLAST

GO - Cellular componenti

  1. integral component of membrane Source: UniProtKB-KW
  2. plasma membrane Source: Reactome
Complete GO annotation...

Keywords - Cellular componenti

Cell membrane, Membrane

Pathology & Biotechi

Organism-specific databases

PharmGKBiPA32220.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 311311Olfactory receptor 2Y1
PRO_0000150513Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Glycosylationi5 – 51N-linked (GlcNAc...) Reviewed prediction
Disulfide bondi97 ↔ 188 By similarity
Glycosylationi264 – 2641N-linked (GlcNAc...) Reviewed prediction

Keywords - PTMi

Disulfide bond, Glycoprotein

Proteomic databases

PaxDbiQ8NGV0.
PRIDEiQ8NGV0.

Expressioni

Gene expression databases

CleanExiHS_OR2Y1.
GenevestigatoriQ8NGV0.

Interactioni

Protein-protein interaction databases

STRINGi9606.ENSP00000312403.

Structurei

3D structure databases

ProteinModelPortaliQ8NGV0.

Family & Domainsi

Sequence similaritiesi

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiNOG39798.
HOGENOMiHOG000041365.
HOVERGENiHBG017625.
InParanoidiQ8NGV0.
KOiK04257.
OMAiACADTEG.
OrthoDBiEOG751NFX.
PhylomeDBiQ8NGV0.
TreeFamiTF336512.

Family and domain databases

Gene3Di1.20.1070.10. 1 hit.
InterProiIPR000276. GPCR_Rhodpsn.
IPR017452. GPCR_Rhodpsn_7TM.
IPR000725. Olfact_rcpt.
[Graphical view]
PRINTSiPR00237. GPCRRHODOPSN.
PR00245. OLFACTORYR.
PROSITEiPS00237. G_PROTEIN_RECEP_F1_1. 1 hit.
PS50262. G_PROTEIN_RECEP_F1_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q8NGV0-1 [UniParc]FASTAAdd to Basket

« Hide

MGSFNTSFED GFILVGFSDW PQLEPILFVF IFIFYSLTLF GNTIIIALSW    50
LDLRLHTPMY FFLSHLSLLD LCFTTSTVPQ LLINLCGVDR TITRGGCVAQ 100
LFIYLALGST ECVLLVVMAF DRYAAVCRPL HYMAIMHPHL CQTLAIASWG 150
AGFVNSLIQT GLAMAMPLCG HRLNHFFCEM PVFLKLACAD TEGTEAKMFV 200
ARVIVVAVPA ALILGSYVHI AHAVLRVKST AGRRKAFGTC GSHLLVVFLF 250
YGSAIYTYLQ SIHNYSEREG KFVALFYTII TPILNPLIYT LRNKDVKGAL 300
WKVLWRGRDS G 311
Length:311
Mass (Da):34,731
Last modified:October 1, 2002 - v1
Checksum:i2CD89C3B48805949
GO

Natural variant

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Natural varianti128 – 1281R → C.
Corresponds to variant rs11960429 [ dbSNP | Ensembl ].
VAR_053162
Natural varianti154 – 1541V → M.
Corresponds to variant rs11954074 [ dbSNP | Ensembl ].
VAR_053163
Natural varianti200 – 2001V → L.2 Publications
Corresponds to variant rs10464105 [ dbSNP | Ensembl ].
VAR_034186

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AB065676 Genomic DNA. Translation: BAC05901.1.
CH471165 Genomic DNA. Translation: EAW53748.1.
BC140756 mRNA. Translation: AAI40757.1.
AF399629 Genomic DNA. Translation: AAK95114.1.
BK004351 Genomic DNA. Translation: DAA04749.1.
CCDSiCCDS34323.1.
RefSeqiNP_001001657.1. NM_001001657.1.
UniGeneiHs.554719.

Genome annotation databases

EnsembliENST00000307832; ENSP00000312403; ENSG00000174339.
GeneIDi134083.
KEGGihsa:134083.
UCSCiuc003mmf.1. human.

Polymorphism databases

DMDMi38372774.

Keywords - Coding sequence diversityi

Polymorphism

Cross-referencesi

Web resourcesi

Human Olfactory Receptor Data Exploratorium (HORDE)

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AB065676 Genomic DNA. Translation: BAC05901.1 .
CH471165 Genomic DNA. Translation: EAW53748.1 .
BC140756 mRNA. Translation: AAI40757.1 .
AF399629 Genomic DNA. Translation: AAK95114.1 .
BK004351 Genomic DNA. Translation: DAA04749.1 .
CCDSi CCDS34323.1.
RefSeqi NP_001001657.1. NM_001001657.1.
UniGenei Hs.554719.

3D structure databases

ProteinModelPortali Q8NGV0.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 9606.ENSP00000312403.

Protein family/group databases

GPCRDBi Search...

Polymorphism databases

DMDMi 38372774.

Proteomic databases

PaxDbi Q8NGV0.
PRIDEi Q8NGV0.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENST00000307832 ; ENSP00000312403 ; ENSG00000174339 .
GeneIDi 134083.
KEGGi hsa:134083.
UCSCi uc003mmf.1. human.

Organism-specific databases

CTDi 134083.
GeneCardsi GC05M180166.
HGNCi HGNC:14837. OR2Y1.
neXtProti NX_Q8NGV0.
PharmGKBi PA32220.
GenAtlasi Search...

Phylogenomic databases

eggNOGi NOG39798.
HOGENOMi HOG000041365.
HOVERGENi HBG017625.
InParanoidi Q8NGV0.
KOi K04257.
OMAi ACADTEG.
OrthoDBi EOG751NFX.
PhylomeDBi Q8NGV0.
TreeFami TF336512.

Enzyme and pathway databases

Reactomei REACT_15488. Olfactory Signaling Pathway.

Miscellaneous databases

GeneWikii OR2Y1.
GenomeRNAii 134083.
NextBioi 83309.
PROi Q8NGV0.

Gene expression databases

CleanExi HS_OR2Y1.
Genevestigatori Q8NGV0.

Family and domain databases

Gene3Di 1.20.1070.10. 1 hit.
InterProi IPR000276. GPCR_Rhodpsn.
IPR017452. GPCR_Rhodpsn_7TM.
IPR000725. Olfact_rcpt.
[Graphical view ]
PRINTSi PR00237. GPCRRHODOPSN.
PR00245. OLFACTORYR.
PROSITEi PS00237. G_PROTEIN_RECEP_F1_1. 1 hit.
PS50262. G_PROTEIN_RECEP_F1_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Genome-wide discovery and analysis of human seven transmembrane helix receptor genes."
    Suwa M., Sato T., Okouchi I., Arita M., Futami K., Matsumoto S., Tsutsumi S., Aburatani H., Asai K., Akiyama Y.
    Submitted (JUL-2001) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA], VARIANT LEU-200.
  3. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA], VARIANT LEU-200.
  4. Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 68-282.
  5. Cited for: IDENTIFICATION.
  6. Erratum
    Malnic B., Godfrey P.A., Buck L.B.
    Proc. Natl. Acad. Sci. U.S.A. 101:7205-7205(2004)

Entry informationi

Entry nameiOR2Y1_HUMAN
AccessioniPrimary (citable) accession number: Q8NGV0
Secondary accession number(s): B9EIP1, Q6IFB1, Q96R16
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 10, 2003
Last sequence update: October 1, 2002
Last modified: September 3, 2014
This is version 99 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. 7-transmembrane G-linked receptors
    List of 7-transmembrane G-linked receptor entries
  2. Human chromosome 5
    Human chromosome 5: entries, gene names and cross-references to MIM
  3. Human entries with polymorphisms or disease mutations
    List of human entries with polymorphisms or disease mutations
  4. Human polymorphisms and disease mutations
    Index of human polymorphisms and disease mutations
  5. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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