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Q8NGK5

- O52M1_HUMAN

UniProt

Q8NGK5 - O52M1_HUMAN

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Protein
Olfactory receptor 52M1
Gene
OR52M1, OR52M1P
Organism
Homo sapiens (Human)
Status
Reviewed - Annotation score: 3 out of 5 - Protein inferred from homologyi

Functioni

Odorant receptor Reviewed prediction.

GO - Molecular functioni

  1. G-protein coupled receptor activity Source: UniProtKB-KW
  2. olfactory receptor activity Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

G-protein coupled receptor, Receptor, Transducer

Keywords - Biological processi

Olfaction, Sensory transduction

Enzyme and pathway databases

ReactomeiREACT_15488. Olfactory Signaling Pathway.

Names & Taxonomyi

Protein namesi
Recommended name:
Olfactory receptor 52M1
Alternative name(s):
Olfactory receptor OR11-11
Gene namesi
Name:OR52M1
Synonyms:OR52M1P
OrganismiHomo sapiens (Human)
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
ProteomesiUP000005640: Chromosome 11

Organism-specific databases

HGNCiHGNC:15225. OR52M1.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Topological domaini1 – 2727Extracellular Reviewed prediction
Add
BLAST
Transmembranei28 – 4821Helical; Name=1; Reviewed prediction
Add
BLAST
Topological domaini49 – 568Cytoplasmic Reviewed prediction
Transmembranei57 – 7721Helical; Name=2; Reviewed prediction
Add
BLAST
Topological domaini78 – 10124Extracellular Reviewed prediction
Add
BLAST
Transmembranei102 – 12221Helical; Name=3; Reviewed prediction
Add
BLAST
Topological domaini123 – 14119Cytoplasmic Reviewed prediction
Add
BLAST
Transmembranei142 – 16221Helical; Name=4; Reviewed prediction
Add
BLAST
Topological domaini163 – 19937Extracellular Reviewed prediction
Add
BLAST
Transmembranei200 – 22021Helical; Name=5; Reviewed prediction
Add
BLAST
Topological domaini221 – 24020Cytoplasmic Reviewed prediction
Add
BLAST
Transmembranei241 – 26121Helical; Name=6; Reviewed prediction
Add
BLAST
Topological domaini262 – 27615Extracellular Reviewed prediction
Add
BLAST
Transmembranei277 – 29721Helical; Name=7; Reviewed prediction
Add
BLAST
Topological domaini298 – 31720Cytoplasmic Reviewed prediction
Add
BLAST

GO - Cellular componenti

  1. integral component of membrane Source: UniProtKB-KW
  2. plasma membrane Source: Reactome
Complete GO annotation...

Keywords - Cellular componenti

Cell membrane, Membrane

Pathology & Biotechi

Organism-specific databases

PharmGKBiPA32422.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 317317Olfactory receptor 52M1
PRO_0000150785Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Disulfide bondi99 ↔ 192 By similarity

Keywords - PTMi

Disulfide bond

Proteomic databases

PaxDbiQ8NGK5.
PRIDEiQ8NGK5.

PTM databases

PhosphoSiteiQ8NGK5.

Expressioni

Gene expression databases

GenevestigatoriQ8NGK5.

Interactioni

Protein-protein interaction databases

STRINGi9606.ENSP00000353343.

Structurei

3D structure databases

ProteinModelPortaliQ8NGK5.
SMRiQ8NGK5. Positions 27-297.

Family & Domainsi

Sequence similaritiesi

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiNOG81318.
HOGENOMiHOG000041363.
HOVERGENiHBG017625.
InParanoidiQ8NGK5.
KOiK04257.
OMAiHPTHILL.
OrthoDBiEOG754HPV.
PhylomeDBiQ8NGK5.
TreeFamiTF343679.

Family and domain databases

Gene3Di1.20.1070.10. 1 hit.
InterProiIPR019424. 7TM_GPCR_olfarory/Srsx.
IPR000276. GPCR_Rhodpsn.
IPR017452. GPCR_Rhodpsn_7TM.
IPR000725. Olfact_rcpt.
[Graphical view]
PfamiPF10320. 7TM_GPCR_Srsx. 1 hit.
[Graphical view]
PRINTSiPR00237. GPCRRHODOPSN.
PR00245. OLFACTORYR.
PROSITEiPS50262. G_PROTEIN_RECEP_F1_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q8NGK5-1 [UniParc]FASTAAdd to Basket

« Hide

MLTFHNVCSV PSSFWLTGIP GLESLHVWLS IPFGSMYLVA VVGNVTILAV    50
VKIERSLHQP MYFFLCMLAA IDLVLSTSTI PKLLGIFWFG ACDIGLDACL 100
GQMFLIHCFA TVESGIFLAM AFDRYVAICN PLRHSMVLTY TVVGRLGLVS 150
LLRGVLYIGP LPLMIRLRLP LYKTHVISHS YCEHMAVVAL TCGDSRVNNV 200
YGLSIGFLVL ILDSVAIAAS YVMIFRAVMG LATPEARLKT LGTCASHLCA 250
ILIFYVPIAV SSLIHRFGQC VPPPVHTLLA NFYLLIPPIL NPIVYAVRTK 300
QIRESLLQIP RIEMKIR 317
Length:317
Mass (Da):35,037
Last modified:October 1, 2002 - v1
Checksum:iB09AD144D01F104F
GO

Natural variant

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Natural varianti9 – 91S → L.
Corresponds to variant rs7112010 [ dbSNP | Ensembl ].
VAR_034349
Natural varianti305 – 3051S → R.
Corresponds to variant rs2657167 [ dbSNP | Ensembl ].
VAR_034350

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AB065789 Genomic DNA. Translation: BAC06008.1.
BK004372 Genomic DNA. Translation: DAA04770.1.
CCDSiCCDS31353.1.
RefSeqiNP_001004137.1. NM_001004137.1.
UniGeneiHs.553567.

Genome annotation databases

EnsembliENST00000360213; ENSP00000353343; ENSG00000197790.
GeneIDi119772.
KEGGihsa:119772.
UCSCiuc010qyf.2. human.

Polymorphism databases

DMDMi74762580.

Keywords - Coding sequence diversityi

Polymorphism

Cross-referencesi

Web resourcesi

Human Olfactory Receptor Data Exploratorium (HORDE)

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AB065789 Genomic DNA. Translation: BAC06008.1 .
BK004372 Genomic DNA. Translation: DAA04770.1 .
CCDSi CCDS31353.1.
RefSeqi NP_001004137.1. NM_001004137.1.
UniGenei Hs.553567.

3D structure databases

ProteinModelPortali Q8NGK5.
SMRi Q8NGK5. Positions 27-297.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 9606.ENSP00000353343.

Protein family/group databases

GPCRDBi Search...

PTM databases

PhosphoSitei Q8NGK5.

Polymorphism databases

DMDMi 74762580.

Proteomic databases

PaxDbi Q8NGK5.
PRIDEi Q8NGK5.

Protocols and materials databases

DNASUi 119772.
Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENST00000360213 ; ENSP00000353343 ; ENSG00000197790 .
GeneIDi 119772.
KEGGi hsa:119772.
UCSCi uc010qyf.2. human.

Organism-specific databases

CTDi 119772.
GeneCardsi GC11P004523.
HGNCi HGNC:15225. OR52M1.
neXtProti NX_Q8NGK5.
PharmGKBi PA32422.
GenAtlasi Search...

Phylogenomic databases

eggNOGi NOG81318.
HOGENOMi HOG000041363.
HOVERGENi HBG017625.
InParanoidi Q8NGK5.
KOi K04257.
OMAi HPTHILL.
OrthoDBi EOG754HPV.
PhylomeDBi Q8NGK5.
TreeFami TF343679.

Enzyme and pathway databases

Reactomei REACT_15488. Olfactory Signaling Pathway.

Miscellaneous databases

GeneWikii OR52M1.
GenomeRNAii 119772.
NextBioi 80498.
PROi Q8NGK5.

Gene expression databases

Genevestigatori Q8NGK5.

Family and domain databases

Gene3Di 1.20.1070.10. 1 hit.
InterProi IPR019424. 7TM_GPCR_olfarory/Srsx.
IPR000276. GPCR_Rhodpsn.
IPR017452. GPCR_Rhodpsn_7TM.
IPR000725. Olfact_rcpt.
[Graphical view ]
Pfami PF10320. 7TM_GPCR_Srsx. 1 hit.
[Graphical view ]
PRINTSi PR00237. GPCRRHODOPSN.
PR00245. OLFACTORYR.
PROSITEi PS50262. G_PROTEIN_RECEP_F1_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Genome-wide discovery and analysis of human seven transmembrane helix receptor genes."
    Suwa M., Sato T., Okouchi I., Arita M., Futami K., Matsumoto S., Tsutsumi S., Aburatani H., Asai K., Akiyama Y.
    Submitted (JUL-2001) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
  2. Cited for: IDENTIFICATION.
  3. Erratum
    Malnic B., Godfrey P.A., Buck L.B.
    Proc. Natl. Acad. Sci. U.S.A. 101:7205-7205(2004)

Entry informationi

Entry nameiO52M1_HUMAN
AccessioniPrimary (citable) accession number: Q8NGK5
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 20, 2005
Last sequence update: October 1, 2002
Last modified: September 3, 2014
This is version 92 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. 7-transmembrane G-linked receptors
    List of 7-transmembrane G-linked receptor entries
  2. Human chromosome 11
    Human chromosome 11: entries, gene names and cross-references to MIM
  3. Human entries with polymorphisms or disease mutations
    List of human entries with polymorphisms or disease mutations
  4. Human polymorphisms and disease mutations
    Index of human polymorphisms and disease mutations
  5. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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