Q8NFY9 (KBTB8_HUMAN) Reviewed, UniProtKB/Swiss-Prot
Last modified
May 1, 2013.
Version 73.
History...
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Kelch repeat and BTB domain-containing protein 8 Alternative name(s): T-cell activation kelch repeat protein Short name=TA-KRP | ||||
| Gene names |
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| Organism | Homo sapiens (Human) [Reference proteome] | ||||
| Taxonomic identifier | 9606 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo![]() |
Protein attributes
| Sequence length | 601 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at transcript level |
General annotation (Comments)
| Sequence similarities | Contains 1 BACK (BTB/Kelch associated) domain. Contains 1 BTB (POZ) domain. Contains 5 Kelch repeats. |
| Sequence caution | The sequence AAI17488.1 differs from that shown. Reason: Erroneous initiation. Translation N-terminally extended. The sequence AAM43839.1 differs from that shown. Reason: Erroneous initiation. Translation N-terminally extended. |
Ontologies
| Keywords | |
|---|---|
| Coding sequence diversity | Polymorphism |
| Domain | Kelch repeat Repeat |
| Technical term | Complete proteome Reference proteome |
| Gene Ontology (GO) | |
| None. [Check GOA] | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 601 | 601 | Kelch repeat and BTB domain-containing protein 8 | PRO_0000278220 | |||||
Regions | |||||||||
| Domain | 49 – 117 | 69 | BTB | ||||||
| Domain | 152 – 254 | 103 | BACK | ||||||
| Repeat | 336 – 390 | 55 | Kelch 1 | ||||||
| Repeat | 391 – 441 | 51 | Kelch 2 | ||||||
| Repeat | 443 – 481 | 39 | Kelch 3 | ||||||
| Repeat | 483 – 532 | 50 | Kelch 4 | ||||||
| Repeat | 542 – 588 | 47 | Kelch 5 | ||||||
Natural variations | |||||||||
| Natural variant | 198 | 1 | S → C in a breast cancer sample; somatic mutation. Ref.7 | VAR_036082 | |||||
| Natural variant | 405 | 1 | R → K in a breast cancer sample; somatic mutation. Ref.7 | VAR_036083 | |||||
| Natural variant | 420 | 1 | C → R. Corresponds to variant rs13096789 [ dbSNP | Ensembl ]. | VAR_030694 | |||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "Complete sequencing and characterization of 21,243 full-length human cDNAs." Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S. Sugano S.Nat. Genet. 36:40-45(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Tissue: Fetal brain. |
| [2] | "The DNA sequence, annotation and analysis of human chromosome 3." Muzny D.M., Scherer S.E., Kaul R., Wang J., Yu J., Sudbrak R., Buhay C.J., Chen R., Cree A., Ding Y., Dugan-Rocha S., Gill R., Gunaratne P., Harris R.A., Hawes A.C., Hernandez J., Hodgson A.V., Hume J. Gibbs R.A.Nature 440:1194-1198(2006) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [3] | "T lymphocyte activation gene discovery using ink-jet microarrays." Mao M., Biery M.C., Kobayashi S.V., Schimmack G.A., Ward T.R., Schelter J.M., Burchard J., He Y.D., Dai H., Leonardson A., Coffey E., Stoughton R., Linsley P.S. Submitted (MAY-2001) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [MRNA] OF 6-601. Tissue: T-cell. |
| [4] | "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 18-601. Tissue: Lung. |
| [5] | "Prediction of the coding sequences of unidentified human genes. XX. The complete sequences of 100 new cDNA clones from brain which code for large proteins in vitro." Nagase T., Nakayama M., Nakajima D., Kikuno R., Ohara O. DNA Res. 8:85-95(2001) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 76-575. Tissue: Brain. |
| [6] | "Construction of expression-ready cDNA clones for KIAA genes: manual curation of 330 KIAA cDNA clones." Nakajima D., Okazaki N., Yamakawa H., Kikuno R., Ohara O., Nagase T. DNA Res. 9:99-106(2002) [PubMed] [Europe PMC] [Abstract] Cited for: SEQUENCE REVISION. |
| [7] | "The consensus coding sequences of human breast and colorectal cancers." Sjoeblom T., Jones S., Wood L.D., Parsons D.W., Lin J., Barber T.D., Mandelker D., Leary R.J., Ptak J., Silliman N., Szabo S., Buckhaults P., Farrell C., Meeh P., Markowitz S.D., Willis J., Dawson D., Willson J.K.V. Velculescu V.E.Science 314:268-274(2006) [PubMed] [Europe PMC] [Abstract] Cited for: VARIANTS [LARGE SCALE ANALYSIS] CYS-198 AND LYS-405. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | AK096640 mRNA. No translation available. AC020655 Genomic DNA. No translation available. AF385438 mRNA. Translation: AAM43839.1. Different initiation. BC117487 mRNA. Translation: AAI17488.1. Different initiation. AB058745 mRNA. Translation: BAB47471.1. |
| IPI | IPI00168944. |
| RefSeq | NP_115894.2. NM_032505.2. |
| UniGene | Hs.116665. |
3D structure databases | |
| HSSP | HSSP built from PDB template 1R29 based on UniProtKB P41182. |
| ProteinModelPortal | Q8NFY9. |
| ModBase | Search... |
Protein-protein interaction databases | |
| STRING | 9606.ENSP00000295568. |
PTM databases | |
| PhosphoSite | Q8NFY9. |
Polymorphism databases | |
| DMDM | 126215728. |
Proteomic databases | |
| PaxDb | Q8NFY9. |
| PRIDE | Q8NFY9. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| Ensembl | ENST00000295568; ENSP00000295568; ENSG00000163376. ENST00000417314; ENSP00000401878; ENSG00000163376. |
| GeneID | 84541. |
| KEGG | hsa:84541. |
| UCSC | uc003dmy.3. human. |
Organism-specific databases | |
| CTD | 84541. |
| GeneCards | GC03P067132. |
| HGNC | HGNC:30691. KBTBD8. |
| HPA | HPA041285. |
| neXtProt | NX_Q8NFY9. |
| PharmGKB | PA142671641. |
| HUGE | Search... |
| GenAtlas | Search... |
Phylogenomic databases | |
| eggNOG | NOG328379. |
| HOGENOM | HOG000113200. |
| HOVERGEN | HBG100857. |
| InParanoid | Q8NFY9. |
| KO | K10475. |
| OMA | TVPCLDI. |
| OrthoDB | EOG4TXBRH. |
Gene expression databases | |
| ArrayExpress | Q8NFY9. |
| Bgee | Q8NFY9. |
| CleanEx | HS_KBTBD8. |
| Genevestigator | Q8NFY9. |
Family and domain databases | |
| Gene3D | 2.120.10.80. 1 hit. 3.30.710.10. 1 hit. |
| InterPro | IPR011705. BACK. IPR000210. BTB/POZ-like. IPR011333. BTB/POZ_fold. IPR013069. BTB_POZ. IPR017096. Kelch-like_gigaxonin. IPR015915. Kelch-typ_b-propeller. IPR006652. Kelch_1. [Graphical view] |
| Pfam | PF07707. BACK. 1 hit. PF00651. BTB. 1 hit. PF01344. Kelch_1. 3 hits. [Graphical view] |
| PIRSF | PIRSF037037. Kelch-like_protein_gigaxonin. 1 hit. |
| SMART | SM00875. BACK. 1 hit. SM00225. BTB. 1 hit. SM00612. Kelch. 3 hits. [Graphical view] |
| SUPFAM | SSF54695. BTB/POZ_fold. 1 hit. |
| PROSITE | PS50097. BTB. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Other | |
| GenomeRNAi | 84541. |
| NextBio | 74398. |
Entry information
| Entry name | KBTB8_HUMAN | ||||||||
| Accession | Primary (citable) accession number: Q8NFY9 Secondary accession number(s): Q96JI5 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Chordata Protein Annotation Program | ||||||||
| Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. | ||||||||
Relevant documents
| Human chromosome 3 Human chromosome 3: entries, gene names and cross-references to MIM |
| Human entries with polymorphisms or disease mutations List of human entries with polymorphisms or disease mutations |
| Human polymorphisms and disease mutations Index of human polymorphisms and disease mutations |
| SIMILARITY comments Index of protein domains and families |

Clusters with
