Q8NFA0 (UBP32_HUMAN) Reviewed, UniProtKB/Swiss-Prot
Last modified
May 1, 2013.
Version 103.
History...
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Ubiquitin carboxyl-terminal hydrolase 32 EC=3.4.19.12 Alternative name(s): Deubiquitinating enzyme 32 Renal carcinoma antigen NY-REN-60 Ubiquitin thioesterase 32 Ubiquitin-specific-processing protease 32 | ||||
| Gene names |
| ||||
| Organism | Homo sapiens (Human) [Reference proteome] | ||||
| Taxonomic identifier | 9606 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo![]() |
Protein attributes
| Sequence length | 1604 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is further processed into a mature form. |
| Protein existence | Evidence at protein level |
General annotation (Comments)
| Catalytic activity | Thiol-dependent hydrolysis of ester, thioester, amide, peptide and isopeptide bonds formed by the C-terminal Gly of ubiquitin (a 76-residue protein attached to proteins as an intracellular targeting signal). Ref.8 |
| Subcellular location | Membrane; Lipid-anchor Potential. Golgi apparatus Ref.8. |
| Sequence similarities | Belongs to the peptidase C19 family. Contains 1 DUSP domain. Contains 3 EF-hand domains. |
Ontologies
| Keywords | |
|---|---|
| Biological process | Ubl conjugation pathway |
| Cellular component | Golgi apparatus Membrane |
| Coding sequence diversity | Polymorphism |
| Domain | Repeat |
| Ligand | Calcium Metal-binding |
| Molecular function | Hydrolase Protease Thiol protease |
| PTM | Lipoprotein Methylation Phosphoprotein Prenylation |
| Technical term | Complete proteome Reference proteome |
| Gene Ontology (GO) | |
| Biological_process | protein deubiquitination Traceable author statement Ref.8. Source: UniProtKB ubiquitin-dependent protein catabolic processInferred from electronic annotation. Source: InterPro |
| Cellular_component | Golgi apparatus Inferred from direct assay Ref.8. Source: UniProtKB membraneInferred from electronic annotation. Source: UniProtKB-SubCell |
| Molecular_function | calcium ion binding Inferred from electronic annotation. Source: InterPro cysteine-type peptidase activityInferred from electronic annotation. Source: UniProtKB-KW ubiquitin thiolesterase activityInferred from direct assay Ref.8. Source: UniProtKB |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 1601 | 1601 | Ubiquitin carboxyl-terminal hydrolase 32 | PRO_0000080663 | |||||
| Propeptide | 1602 – 1604 | 3 | Removed in mature form Potential | PRO_0000396658 | |||||
Regions | |||||||||
| Domain | 91 – 126 | 36 | EF-hand 1 | ||||||
| Domain | 228 – 263 | 36 | EF-hand 2 | ||||||
| Domain | 264 – 299 | 36 | EF-hand 3 | ||||||
| Domain | 369 – 585 | 217 | DUSP | ||||||
| Calcium binding | 241 – 252 | 12 | 1 Potential | ||||||
| Calcium binding | 277 – 288 | 12 | 2 Potential | ||||||
Sites | |||||||||
| Active site | 743 | 1 | Nucleophile By similarity | ||||||
| Active site | 1526 | 1 | Proton acceptor By similarity | ||||||
Amino acid modifications | |||||||||
| Modified residue | 1173 | 1 | Phosphotyrosine Ref.6 | ||||||
| Modified residue | 1372 | 1 | Phosphoserine Ref.7 Ref.9 | ||||||
| Modified residue | 1601 | 1 | Cysteine methyl ester Potential | ||||||
| Lipidation | 1601 | 1 | S-farnesyl cysteine Potential | ||||||
Natural variations | |||||||||
| Natural variant | 76 | 1 | H → Y. Corresponds to variant rs7208980 [ dbSNP | Ensembl ]. | VAR_051536 | |||||
| Natural variant | 1469 | 1 | A → G. Corresponds to variant rs3207630 [ dbSNP | Ensembl ]. | VAR_051537 | |||||
| Natural variant | 1568 | 1 | G → R. Corresponds to variant rs16944142 [ dbSNP | Ensembl ]. | VAR_051538 | |||||
| Natural variant | 1578 | 1 | T → I. Corresponds to variant rs16944136 [ dbSNP | Ensembl ]. | VAR_051539 | |||||
Experimental info | |||||||||
| Sequence conflict | 884 | 1 | H → R in AAK30207. Ref.2 | ||||||
| Sequence conflict | 1167 | 1 | C → S in AAK30207. Ref.2 | ||||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "The Tre2 (USP6) oncogene is a hominoid-specific gene." Paulding C.A., Ruvolo M., Haber D.A. Proc. Natl. Acad. Sci. U.S.A. 100:2507-2511(2003) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA]. Tissue: Brain. |
| [2] | "Identification of a novel ubiquitin specific protease gene related to testes development from human testes cDNA library." Sha J.H. Submitted (FEB-2001) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [MRNA] OF 331-1604. Tissue: Testis. |
| [3] | "Antigens recognized by autologous antibody in patients with renal-cell carcinoma." Scanlan M.J., Gordan J.D., Williamson B., Stockert E., Bander N.H., Jongeneel C.V., Gure A.O., Jaeger D., Jaeger E., Knuth A., Chen Y.-T., Old L.J. Int. J. Cancer 83:456-464(1999) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] OF 536-1363, IDENTIFICATION AS A RENAL CANCER ANTIGEN. |
| [4] | "Global, in vivo, and site-specific phosphorylation dynamics in signaling networks." Olsen J.V., Blagoev B., Gnad F., Macek B., Kumar C., Mortensen P., Mann M. Cell 127:635-648(2006) [PubMed] [Europe PMC] [Abstract] Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]. Tissue: Cervix carcinoma. |
| [5] | "Towards complete sets of farnesylated and geranylgeranylated proteins." Maurer-Stroh S., Koranda M., Benetka W., Schneider G., Sirota F.L., Eisenhaber F. PLoS Comput. Biol. 3:634-648(2007) [PubMed] [Europe PMC] [Abstract] Cited for: PREDICTION OF ISOPRENYLATION AT CYS-1601. |
| [6] | "A quantitative atlas of mitotic phosphorylation." Dephoure N., Zhou C., Villen J., Beausoleil S.A., Bakalarski C.E., Elledge S.J., Gygi S.P. Proc. Natl. Acad. Sci. U.S.A. 105:10762-10767(2008) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT TYR-1173, MASS SPECTROMETRY. Tissue: Cervix carcinoma. |
| [7] | "Quantitative phosphoproteomic analysis of T cell receptor signaling reveals system-wide modulation of protein-protein interactions." Mayya V., Lundgren D.H., Hwang S.-I., Rezaul K., Wu L., Eng J.K., Rodionov V., Han D.K. Sci. Signal. 2:RA46-RA46(2009) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-1372, MASS SPECTROMETRY. Tissue: Leukemic T-cell. |
| [8] | "USP32 is an active, membrane-bound ubiquitin protease overexpressed in breast cancers." Akhavantabasi S., Akman H.B., Sapmaz A., Keller J., Petty E.M., Erson A.E. Mamm. Genome 21:388-397(2010) [PubMed] [Europe PMC] [Abstract] Cited for: CATALYTIC ACTIVITY, SUBCELLULAR LOCATION. |
| [9] | "System-wide temporal characterization of the proteome and phosphoproteome of human embryonic stem cell differentiation." Rigbolt K.T., Prokhorova T.A., Akimov V., Henningsen J., Johansen P.T., Kratchmarova I., Kassem M., Mann M., Olsen J.V., Blagoev B. Sci. Signal. 4:RS3-RS3(2011) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-1372, MASS SPECTROMETRY. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | AF533230 mRNA. Translation: AAM97922.1. AF350251 mRNA. Translation: AAK30207.1. AF155116 mRNA. Translation: AAD42882.1. |
| IPI | IPI00185661. |
| RefSeq | NP_115971.2. NM_032582.3. |
| UniGene | Hs.132868. |
3D structure databases | |
| ProteinModelPortal | Q8NFA0. |
| ModBase | Search... |
Protein-protein interaction databases | |
| IntAct | Q8NFA0. 18 interactions. |
| STRING | 9606.ENSP00000300896. |
Protein family/group databases | |
| MEROPS | C19.044. |
PTM databases | |
| PhosphoSite | Q8NFA0. |
Polymorphism databases | |
| DMDM | 47606649. |
Proteomic databases | |
| PaxDb | Q8NFA0. |
| PRIDE | Q8NFA0. |
Protocols and materials databases | |
| DNASU | 84669. |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| Ensembl | ENST00000300896; ENSP00000300896; ENSG00000170832. |
| GeneID | 84669. |
| KEGG | hsa:84669. |
| UCSC | uc002iyn.1. human. |
Organism-specific databases | |
| CTD | 84669. |
| GeneCards | GC17M058254. |
| HGNC | HGNC:19143. USP32. |
| HPA | HPA044365. |
| MIM | 607740. gene. |
| neXtProt | NX_Q8NFA0. |
| PharmGKB | PA134982542. |
| GenAtlas | Search... |
Phylogenomic databases | |
| eggNOG | COG5210. |
| HOGENOM | HOG000007511. |
| HOVERGEN | HBG057958. |
| InParanoid | Q8NFA0. |
| KO | K11837. |
| OMA | SDNNNQC. |
| OrthoDB | EOG49S65F. |
| PhylomeDB | Q8NFA0. |
Gene expression databases | |
| ArrayExpress | Q8NFA0. |
| Bgee | Q8NFA0. |
| CleanEx | HS_USP10. HS_USP32. |
| Genevestigator | Q8NFA0. |
| GermOnline | ENSG00000170832. Homo sapiens. |
Family and domain databases | |
| Gene3D | 1.10.238.10. 2 hits. |
| InterPro | IPR011992. EF-hand-like_dom. IPR018247. EF_Hand_1_Ca_BS. IPR002048. EF_hand_dom. IPR006615. Pept_C19_DUSP. IPR018200. Pept_C19ubi-hydrolase_C_CS. IPR001394. Peptidase_C19. IPR001125. Recoverin. [Graphical view] |
| Pfam | PF06337. DUSP. 1 hit. PF13202. EF_hand_3. 2 hits. PF00443. UCH. 1 hit. [Graphical view] |
| PRINTS | PR00450. RECOVERIN. |
| SMART | SM00695. DUSP. 1 hit. SM00054. EFh. 2 hits. [Graphical view] |
| PROSITE | PS51283. DUSP. 1 hit. PS00018. EF_HAND_1. 2 hits. PS50222. EF_HAND_2. 3 hits. PS00972. UCH_2_1. 1 hit. PS00973. UCH_2_2. 1 hit. PS50235. UCH_2_3. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Other | |
| ChiTaRS | USP32. human. |
| GenomeRNAi | 84669. |
| NextBio | 74669. |
| SOURCE | Search... |
Entry information
| Entry name | UBP32_HUMAN | ||||||||
| Accession | Primary (citable) accession number: Q8NFA0 Secondary accession number(s): Q9BX85, Q9Y591 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Chordata Protein Annotation Program | ||||||||
| Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. | ||||||||
Relevant documents
| Peptidase families Classification of peptidase families and list of entries |
| Human chromosome 17 Human chromosome 17: entries, gene names and cross-references to MIM |
| Human entries with polymorphisms or disease mutations List of human entries with polymorphisms or disease mutations |
| Human polymorphisms and disease mutations Index of human polymorphisms and disease mutations |
| MIM cross-references Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot |
| SIMILARITY comments Index of protein domains and families |

Clusters with
