Q8NF50 (DOCK8_HUMAN) Reviewed, UniProtKB/Swiss-Prot
Last modified
May 1, 2013.
Version 100.
History...
Names·Attributes·General annotation·Ontologies·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Dedicator of cytokinesis protein 8 | ||
| Gene names |
| ||
| Organism | Homo sapiens (Human) [Reference proteome] | ||
| Taxonomic identifier | 9606 [NCBI] | ||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo![]() |
Protein attributes
| Sequence length | 2099 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at protein level |
General annotation (Comments)
| Function | Potential guanine nucleotide exchange factor (GEF). GEF proteins activate some small GTPases by exchanging bound GDP for free GTP By similarity. |
| Domain | The DHR-2 domain may mediate some GEF activity By similarity. |
| Involvement in disease | Hyperimmunoglobulin E recurrent infection syndrome, autosomal recessive (AR-HIES) [MIM:243700]: A rare disorder characterized by immunodeficiency, recurrent infections, eczema, increased serum IgE, eosinophilia and lack of connective tissue and skeletal involvement. Mental retardation, autosomal dominant 2 (MRD2) [MIM:614113]: A disorder characterized by significantly below average general intellectual functioning associated with impairments in adaptative behavior and manifested during the developmental period. |
| Sequence similarities | Belongs to the DOCK family. Contains 1 DHR-1 domain. Contains 1 DHR-2 domain. |
| Sequence caution | The sequence AAG42221.1 differs from that shown. Reason: Frameshift at positions 2067 and 2083. The sequence BAB84907.1 differs from that shown. Reason: Frameshift at position 1956. The sequence CAI46160.1 differs from that shown. Reason: Erroneous initiation. |
Ontologies
| Keywords | |
|---|---|
| Coding sequence diversity | Alternative splicing Chromosomal rearrangement Polymorphism |
| Disease | Disease mutation Mental retardation |
| Molecular function | Guanine-nucleotide releasing factor |
| PTM | Phosphoprotein |
| Technical term | Complete proteome Reference proteome |
| Gene Ontology (GO) | |
| Biological_process | blood coagulation Traceable author statement. Source: Reactome small GTPase mediated signal transductionInferred from electronic annotation. Source: InterPro |
| Cellular_component | cytosol Traceable author statement. Source: Reactome |
| Molecular_function | guanyl-nucleotide exchange factor activity Inferred from electronic annotation. Source: UniProtKB-KW |
| Complete GO annotation... | |
Alternative products
| This entry describes 4 isoforms produced by alternative splicing. [Align] [Select] | ||||||
| Isoform 1 (identifier: Q8NF50-1) This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry. | ||||||
| Isoform 2 (identifier: Q8NF50-2) The sequence of this isoform differs from the canonical sequence as follows: 927-958: Missing. | ||||||
| Note: No experimental confirmation available. | ||||||
| Isoform 3 (identifier: Q8NF50-3) The sequence of this isoform differs from the canonical sequence as follows: 1-68: Missing. | ||||||
| Isoform 4 (identifier: Q8NF50-4) The sequence of this isoform differs from the canonical sequence as follows: 1-68: Missing. 927-958: Missing. | ||||||
| Note: No experimental confirmation available. |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 2099 | 2099 | Dedicator of cytokinesis protein 8 | PRO_0000189997 | |||||
Regions | |||||||||
| Domain | 560 – 729 | 170 | DHR-1 | ||||||
| Domain | 1632 – 2066 | 435 | DHR-2 | ||||||
Amino acid modifications | |||||||||
| Modified residue | 451 | 1 | Phosphoserine Ref.11 Ref.12 | ||||||
Natural variations | |||||||||
| Alternative sequence | 1 – 68 | 68 | Missing in isoform 3 and isoform 4. | VSP_039838 | |||||
| Alternative sequence | 927 – 958 | 32 | Missing in isoform 2 and isoform 4. | VSP_027373 | |||||
| Natural variant | 97 | 1 | P → T. Ref.1 Corresponds to variant rs529208 [ dbSNP | Ensembl ]. | VAR_033888 | |||||
| Natural variant | 169 | 1 | E → K. Corresponds to variant rs11789099 [ dbSNP | Ensembl ]. | VAR_059972 | |||||
| Natural variant | 237 | 1 | E → K. Corresponds to variant rs11789099 [ dbSNP | Ensembl ]. | VAR_033889 | |||||
| Natural variant | 413 | 1 | N → S. Ref.3 Corresponds to variant rs10970979 [ dbSNP | Ensembl ]. | VAR_033890 | |||||
| Natural variant | 473 | 1 | K → R in AR-HIES. Ref.14 | VAR_063753 | |||||
| Natural variant | 597 | 1 | A → V. Corresponds to variant rs17673268 [ dbSNP | Ensembl ]. | VAR_033891 | |||||
| Natural variant | 1008 | 1 | R → W. Corresponds to variant rs16937932 [ dbSNP | Ensembl ]. | VAR_033892 | |||||
| Natural variant | 1970 | 1 | A → P. Ref.8 Corresponds to variant rs34908836 [ dbSNP | Ensembl ]. | VAR_033893 | |||||
Experimental info | |||||||||
| Sequence conflict | 22 | 1 | A → V in BAE45254. Ref.1 | ||||||
| Sequence conflict | 470 | 1 | S → I in AAI30519. Ref.3 | ||||||
| Sequence conflict | 470 | 1 | S → I in AAI43930. Ref.3 | ||||||
| Sequence conflict | 600 | 1 | V → VV in CAI46160. Ref.4 | ||||||
| Sequence conflict | 1751 | 1 | V → F in BAB84907. Ref.6 | ||||||
| Sequence conflict | 1755 | 1 | V → F in BAB84907. Ref.6 | ||||||
| Sequence conflict | 1927 | 1 | Y → F in AAI30519. Ref.3 | ||||||
| Sequence conflict | 1927 | 1 | Y → F in AAI43930. Ref.3 | ||||||
| Sequence conflict | 2029 | 1 | E → K in AAG42221. Ref.8 | ||||||
| Sequence conflict | 2046 | 1 | L → F in AAG42221. Ref.8 | ||||||
Sequences
| ||||||||||||||||||||||||||||||||||||
References
| « Hide 'large scale' references | |
| [1] | "DOCK8, a candidate tumor suppressor gene." Takahashi K., Kohno T., Yokota J. Submitted (SEP-2004) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1), VARIANT THR-97. Tissue: Lung. |
| [2] | "DNA sequence and analysis of human chromosome 9." Humphray S.J., Oliver K., Hunt A.R., Plumb R.W., Loveland J.E., Howe K.L., Andrews T.D., Searle S., Hunt S.E., Scott C.E., Jones M.C., Ainscough R., Almeida J.P., Ambrose K.D., Ashwell R.I.S., Babbage A.K., Babbage S., Bagguley C.L. Dunham I.Nature 429:369-374(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [3] | "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORMS 3 AND 4), NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 53-2099 (ISOFORM 2), VARIANT SER-413. Tissue: Brain, Muscle and Testis. |
| [4] | "The full-ORF clone resource of the German cDNA consortium." Bechtel S., Rosenfelder H., Duda A., Schmidt C.P., Ernst U., Wellenreuther R., Mehrle A., Schuster C., Bahr A., Bloecker H., Heubner D., Hoerlein A., Michel G., Wedler H., Koehrer K., Ottenwaelder B., Poustka A., Wiemann S., Schupp I. BMC Genomics 8:399-399(2007) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 53-2099 (ISOFORM 1). Tissue: Lymph node. |
| [5] | "Characterization of long cDNA clones from human adult spleen. II. The complete sequences of 81 cDNA clones." Jikuya H., Takano J., Kikuno R., Hirosawa M., Nagase T., Nomura N., Ohara O. DNA Res. 10:49-57(2003) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 301-2099 (ISOFORM 1). Tissue: Spleen. |
| [6] | "The nucleotide sequence of a long cDNA clone isolated from human spleen." Jikuya H., Takano J., Nomura N., Kikuno R., Nagase T., Ohara O. Submitted (FEB-2002) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 591-2099 (ISOFORM 1). Tissue: Spleen. |
| [7] | "Complete sequencing and characterization of 21,243 full-length human cDNAs." Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S. Sugano S.Nat. Genet. 36:40-45(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 920-2099 (ISOFORM 1). Tissue: Spleen. |
| [8] | "The region on 9p associated with 46,XY sex reversal contains several transcripts expressed in the urogenital system and a novel doublesex-related domain." Ottolenghi C., Veitia R., Quintana-Murci L., Torchard D., Scapoli L., Souleyreau-Therville N., Beckmann J., Fellous M., McElreavey K. Genomics 64:170-178(2000) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] OF 1775-2099, VARIANT PRO-1970. |
| [9] | "Identification of an evolutionarily conserved superfamily of DOCK180-related proteins with guanine nucleotide exchange activity." Cote J.-F., Vuori K. J. Cell Sci. 115:4901-4913(2002) [PubMed] [Europe PMC] [Abstract] Cited for: NOMENCLATURE. |
| [10] | "Dedicator of cytokinesis 8 is disrupted in two patients with mental retardation and developmental disabilities." Griggs B.L., Ladd S., Saul R.A., DuPont B.R., Srivastava A.K. Genomics 91:195-202(2008) [PubMed] [Europe PMC] [Abstract] Cited for: CHROMOSOMAL TRANSLOCATION, INVOLVEMENT IN MRD2. |
| [11] | "Large-scale proteomics analysis of the human kinome." Oppermann F.S., Gnad F., Olsen J.V., Hornberger R., Greff Z., Keri G., Mann M., Daub H. Mol. Cell. Proteomics 8:1751-1764(2009) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-451, MASS SPECTROMETRY. |
| [12] | "Quantitative phosphoproteomics reveals widespread full phosphorylation site occupancy during mitosis." Olsen J.V., Vermeulen M., Santamaria A., Kumar C., Miller M.L., Jensen L.J., Gnad F., Cox J., Jensen T.S., Nigg E.A., Brunak S., Mann M. Sci. Signal. 3:RA3-RA3(2010) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-451, MASS SPECTROMETRY. Tissue: Cervix carcinoma. |
| [13] | "Initial characterization of the human central proteome." Burkard T.R., Planyavsky M., Kaupe I., Breitwieser F.P., Buerckstuemmer T., Bennett K.L., Superti-Furga G., Colinge J. BMC Syst. Biol. 5:17-17(2011) [PubMed] [Europe PMC] [Abstract] Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]. |
| [14] | "Combined immunodeficiency associated with DOCK8 mutations." Zhang Q., Davis J.C., Lamborn I.T., Freeman A.F., Jing H., Favreau A.J., Matthews H.F., Davis J., Turner M.L., Uzel G., Holland S.M., Su H.C. N. Engl. J. Med. 361:2046-2055(2009) [PubMed] [Europe PMC] [Abstract] Cited for: VARIANT AR-HIES ARG-473. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | AB191037 mRNA. Translation: BAE45254.1. AL158832, AL161725 Genomic DNA. Translation: CAM22536.1. AL161725, AL158832 Genomic DNA. Translation: CAM13234.1. BC019102 mRNA. Translation: AAH19102.2. BC112894 mRNA. Translation: AAI12895.1. BC130518 mRNA. Translation: AAI30519.1. BC143929 mRNA. Translation: AAI43930.1. AL583913 mRNA. Translation: CAC29497.1. AL832270 mRNA. Translation: CAI46160.1. Different initiation. AK090429 mRNA. Translation: BAC03410.1. AK074081 mRNA. Translation: BAB84907.1. Frameshift. AK024436 mRNA. Translation: BAB15726.1. AF194407 mRNA. Translation: AAG42221.1. Frameshift. |
| IPI | IPI00797373. IPI00856108. IPI00942335. IPI00945909. |
| RefSeq | NP_001177387.1. NM_001190458.1. NP_001180465.1. NM_001193536.1. NP_982272.2. NM_203447.3. |
| UniGene | Hs.132599. |
3D structure databases | |
| ProteinModelPortal | Q8NF50. |
| ModBase | Search... |
Protein-protein interaction databases | |
| IntAct | Q8NF50. 7 interactions. |
| MINT | MINT-1189381. |
PTM databases | |
| PhosphoSite | Q8NF50. |
Polymorphism databases | |
| DMDM | 158937439. |
Proteomic databases | |
| PaxDb | Q8NF50. |
| PRIDE | Q8NF50. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| Ensembl | ENST00000432829; ENSP00000394888; ENSG00000107099. ENST00000453981; ENSP00000408464; ENSG00000107099. ENST00000469391; ENSP00000419438; ENSG00000107099. |
| GeneID | 81704. |
| KEGG | hsa:81704. |
| UCSC | uc003zgf.2. human. |
Organism-specific databases | |
| CTD | 81704. |
| GeneCards | GC09P000263. |
| HGNC | HGNC:19191. DOCK8. |
| HPA | HPA003218. |
| MIM | 243700. phenotype. 611432. gene. 614113. phenotype. |
| neXtProt | NX_Q8NF50. |
| Orphanet | 178469. Autosomal dominant nonsyndromic intellectual deficit. 169446. Autosomal recessive hyper IgE syndrome. 217390. Severe combined immunodeficiency due to DOCK8 deficiency. |
| PharmGKB | PA134918866. |
| GenAtlas | Search... |
Phylogenomic databases | |
| eggNOG | NOG242127. |
| HOVERGEN | HBG051390. |
| InParanoid | Q8NF50. |
| OMA | SVHTQDN. |
| OrthoDB | EOG42Z4P8. |
Enzyme and pathway databases | |
| Reactome | REACT_604. Hemostasis. |
Gene expression databases | |
| ArrayExpress | Q8NF50. |
| Bgee | Q8NF50. |
| Genevestigator | Q8NF50. |
| GermOnline | ENSG00000107099. Homo sapiens. |
Family and domain databases | |
| InterPro | IPR016024. ARM-type_fold. IPR027007. DHR-1_domain. IPR027357. DHR-2. IPR026791. DOCK. IPR010703. DOCK_C. IPR021816. DOCK_C/D_N. IPR026798. DOCK_C_fam. [Graphical view] |
| PANTHER | PTHR23317. PTHR23317. 1 hit. PTHR23317:SF27. PTHR23317:SF27. 1 hit. |
| Pfam | PF06920. Ded_cyto. 1 hit. PF14429. DOCK-C2. 1 hit. PF11878. DUF3398. 1 hit. [Graphical view] |
| SUPFAM | SSF48371. ARM-type_fold. 1 hit. |
| PROSITE | PS51650. DHR_1. 1 hit. PS51651. DHR_2. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Other | |
| GenomeRNAi | 81704. |
| NextBio | 72063. |
| SOURCE | Search... |
Entry information
| Entry name | DOCK8_HUMAN | ||||||||
| Accession | Primary (citable) accession number: Q8NF50 Secondary accession number(s): A2A350 Q9H7P2 | ||||||||
| Entry history |
| ||||||||
| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Chordata Protein Annotation Program | ||||||||
| Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. | ||||||||
Relevant documents
| Human chromosome 9 Human chromosome 9: entries, gene names and cross-references to MIM |
| Human entries with polymorphisms or disease mutations List of human entries with polymorphisms or disease mutations |
| Human polymorphisms and disease mutations Index of human polymorphisms and disease mutations |
| MIM cross-references Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot |
| SIMILARITY comments Index of protein domains and families |

Clusters with
