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Protein

Uncharacterized protein C17orf47

Gene

C17orf47

Organism
Homo sapiens (Human)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein C17orf47
Gene namesi
OrganismiHomo sapiens (Human)
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 17

Organism-specific databases

HGNCiHGNC:26844. C17orf47.

Pathology & Biotechi

Organism-specific databases

OpenTargetsiENSG00000181013.
PharmGKBiPA142672230.

Polymorphism and mutation databases

BioMutaiC17orf47.
DMDMi300669697.

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002865651 – 570Uncharacterized protein C17orf47Add BLAST570

Proteomic databases

EPDiQ8NEP4.
PaxDbiQ8NEP4.
PeptideAtlasiQ8NEP4.
PRIDEiQ8NEP4.

PTM databases

iPTMnetiQ8NEP4.
PhosphoSitePlusiQ8NEP4.

Expressioni

Gene expression databases

BgeeiENSG00000181013.
CleanExiHS_C17orf47.
GenevisibleiQ8NEP4. HS.

Organism-specific databases

HPAiHPA028424.

Structurei

3D structure databases

ProteinModelPortaliQ8NEP4.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiENOG410II9Q. Eukaryota.
ENOG41114NK. LUCA.
GeneTreeiENSGT00390000018146.
HOGENOMiHOG000059265.
HOVERGENiHBG098211.
InParanoidiQ8NEP4.
OMAiSSPFCED.
OrthoDBiEOG091G09FD.
PhylomeDBiQ8NEP4.
TreeFamiTF338016.

Family and domain databases

InterProiIPR027979. DUF4655.
[Graphical view]
PfamiPF15548. DUF4655. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q8NEP4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVKTNKPGAK VAVSAQRGSE VTTNTSPQQG HGYVLASSHR SAAVSLNPSH
60 70 80 90 100
RRSEAAHPTT PHSASDYPRS VSLQSGPGHY AVPTPRGPET GPRTESSRHS
110 120 130 140 150
SPHLKSQKTQ TLASHASSRQ WKVSPPREEA ARRGSESKSG REVGHHASSI
160 170 180 190 200
PDAKSTHQLS FQDQKNNLQS QILEDDPPSK VQNPQGVRVP RRILSYPKDE
210 220 230 240 250
AVQTEPIQRI TTTSEIRSPR SPSLLEHGSS CVSADYQTAQ RRVPVEESET
260 270 280 290 300
GPYGPIPSKP KALYRNMNLD SLLKLSVLKD SDGVHRVSAR VDPESLHKYS
310 320 330 340 350
AYPETKPSAK VLVSSQVESN VRTPIRGNSE VGRRVTISPG VQSVEPTHHV
360 370 380 390 400
TVPSVSEGSH KSSMFVTPEP IYKQQTQKPP EITYMSQGPT PRYPELSQKP
410 420 430 440 450
SIHAELELTP RPLPPRSLPR YGPDSSWWPL LNPEVETPQS QLTTPDFEPK
460 470 480 490 500
CSPSLDLLLS GFKIDSSPFC EDLKFQREKA SLSPPSPPKE FPSWAPLSEV
510 520 530 540 550
PQTPKHTCKQ PIQRFTAFFL DVSEEMYNRV IWWLKGLCFS LLWAHCGSLG
560 570
DGRTGEEWHL CIYRAGSFRR
Length:570
Mass (Da):63,111
Last modified:July 13, 2010 - v3
Checksum:i9F969B747A509359
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sequence conflicti187V → A in BAC05054 (PubMed:14702039).Curated1

Natural variant

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Natural variantiVAR_03212288P → T.2 PublicationsCorresponds to variant rs8071623dbSNPEnsembl.1
Natural variantiVAR_032123461G → S.Corresponds to variant rs17822735dbSNPEnsembl.1
Natural variantiVAR_032124546C → G.Corresponds to variant rs16943091dbSNPEnsembl.1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK097440 mRNA. Translation: BAC05054.1.
BC022189 mRNA. Translation: AAH22189.2.
CCDSiCCDS32691.1.
RefSeqiNP_001033793.2. NM_001038704.2.
UniGeneiHs.646574.

Genome annotation databases

EnsembliENST00000321691; ENSP00000354874; ENSG00000181013.
GeneIDi284083.
KEGGihsa:284083.
UCSCiuc002iwq.3. human.

Keywords - Coding sequence diversityi

Polymorphism

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK097440 mRNA. Translation: BAC05054.1.
BC022189 mRNA. Translation: AAH22189.2.
CCDSiCCDS32691.1.
RefSeqiNP_001033793.2. NM_001038704.2.
UniGeneiHs.646574.

3D structure databases

ProteinModelPortaliQ8NEP4.
ModBaseiSearch...
MobiDBiSearch...

PTM databases

iPTMnetiQ8NEP4.
PhosphoSitePlusiQ8NEP4.

Polymorphism and mutation databases

BioMutaiC17orf47.
DMDMi300669697.

Proteomic databases

EPDiQ8NEP4.
PaxDbiQ8NEP4.
PeptideAtlasiQ8NEP4.
PRIDEiQ8NEP4.

Protocols and materials databases

DNASUi284083.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000321691; ENSP00000354874; ENSG00000181013.
GeneIDi284083.
KEGGihsa:284083.
UCSCiuc002iwq.3. human.

Organism-specific databases

CTDi284083.
GeneCardsiC17orf47.
H-InvDBHIX0014035.
HGNCiHGNC:26844. C17orf47.
HPAiHPA028424.
neXtProtiNX_Q8NEP4.
OpenTargetsiENSG00000181013.
PharmGKBiPA142672230.
GenAtlasiSearch...

Phylogenomic databases

eggNOGiENOG410II9Q. Eukaryota.
ENOG41114NK. LUCA.
GeneTreeiENSGT00390000018146.
HOGENOMiHOG000059265.
HOVERGENiHBG098211.
InParanoidiQ8NEP4.
OMAiSSPFCED.
OrthoDBiEOG091G09FD.
PhylomeDBiQ8NEP4.
TreeFamiTF338016.

Miscellaneous databases

GenomeRNAii284083.
PROiQ8NEP4.

Gene expression databases

BgeeiENSG00000181013.
CleanExiHS_C17orf47.
GenevisibleiQ8NEP4. HS.

Family and domain databases

InterProiIPR027979. DUF4655.
[Graphical view]
PfamiPF15548. DUF4655. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiCQ047_HUMAN
AccessioniPrimary (citable) accession number: Q8NEP4
Secondary accession number(s): Q8N821
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 15, 2007
Last sequence update: July 13, 2010
Last modified: November 2, 2016
This is version 88 of the entry and version 3 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Human chromosome 17
    Human chromosome 17: entries, gene names and cross-references to MIM
  2. Human entries with polymorphisms or disease mutations
    List of human entries with polymorphisms or disease mutations
  3. Human polymorphisms and disease mutations
    Index of human polymorphisms and disease mutations

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.