Q8NDI1 (EHBP1_HUMAN) Reviewed, UniProtKB/Swiss-Prot
Last modified
May 1, 2013.
Version 84.
History...
Names·Attributes·General annotation·Ontologies·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: EH domain-binding protein 1 | ||||
| Gene names |
| ||||
| Organism | Homo sapiens (Human) [Reference proteome] | ||||
| Taxonomic identifier | 9606 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo![]() |
Protein attributes
| Sequence length | 1231 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at protein level |
General annotation (Comments)
| Function | May play a role in actin reorganization. Links clathrin-mediated endocytosis to the actin cytoskeleton. Ref.1 |
| Subunit structure | Interacts with EHD2. Ref.1 |
| Subcellular location | Cytoplasm. Membrane. Note: Mostly found in cytosol and plasma membrane. Ref.1 |
| Involvement in disease | Prostate cancer, hereditary, 12 (HPC12) [MIM:611868]: A condition associated with familial predisposition to cancer of the prostate. Most prostate cancers are adenocarcinomas that develop in the acini of the prostatic ducts. Other rare histopathologic types of prostate cancer that occur in approximately 5% of patients include small cell carcinoma, mucinous carcinoma, prostatic ductal carcinoma, transitional cell carcinoma, squamous cell carcinoma, basal cell carcinoma, adenoid cystic carcinoma (basaloid), signet-ring cell carcinoma and neuroendocrine carcinoma. |
| Sequence similarities | Contains 1 CH (calponin-homology) domain. |
| Sequence caution | The sequence BAA91391.1 differs from that shown. Reason: Contaminating sequence. Potential poly-A sequence. |
Ontologies
| Keywords | |
|---|---|
| Cellular component | Cytoplasm Membrane |
| Coding sequence diversity | Alternative splicing Polymorphism |
| Domain | Coiled coil |
| PTM | Phosphoprotein |
| Technical term | 3D-structure Complete proteome Reference proteome |
| Gene Ontology (GO) | |
| Cellular_component | cytoplasm Inferred from direct assay. Source: HPA membraneInferred from electronic annotation. Source: UniProtKB-SubCell |
| Complete GO annotation... | |
Alternative products
| This entry describes 3 isoforms produced by alternative splicing. [Align] [Select] | ||||||
| Isoform 1 (identifier: Q8NDI1-1) This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry. | ||||||
| Isoform 2 (identifier: Q8NDI1-2) The sequence of this isoform differs from the canonical sequence as follows: 212-246: Missing. | ||||||
| Note: No experimental confirmation available. | ||||||
| Isoform 3 (identifier: Q8NDI1-3) The sequence of this isoform differs from the canonical sequence as follows: 212-246: Missing. 905-940: Missing. | ||||||
| Note: No experimental confirmation available. |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | |||||||||||||||||||||||
Molecule processing | ||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 1231 | 1231 | EH domain-binding protein 1 | PRO_0000285202 | ||||||||||||||||||||||||
Regions | ||||||||||||||||||||||||||||
| Domain | 443 – 545 | 103 | CH | |||||||||||||||||||||||||
| Coiled coil | 185 – 210 | 26 | Potential | |||||||||||||||||||||||||
| Coiled coil | 808 – 879 | 72 | Potential | |||||||||||||||||||||||||
| Coiled coil | 1076 – 1100 | 25 | Potential | |||||||||||||||||||||||||
| Coiled coil | 1136 – 1230 | 95 | Potential | |||||||||||||||||||||||||
| Compositional bias | 362 – 365 | 4 | Poly-Glu | |||||||||||||||||||||||||
| Compositional bias | 1110 – 1113 | 4 | Poly-Glu | |||||||||||||||||||||||||
Amino acid modifications | ||||||||||||||||||||||||||||
| Modified residue | 171 | 1 | Phosphoserine Ref.9 Ref.10 Ref.11 | |||||||||||||||||||||||||
| Modified residue | 174 | 1 | Phosphoserine Ref.9 Ref.10 Ref.11 | |||||||||||||||||||||||||
| Modified residue | 177 | 1 | Phosphoserine Ref.9 | |||||||||||||||||||||||||
| Modified residue | 432 | 1 | Phosphoserine Ref.9 Ref.10 | |||||||||||||||||||||||||
| Modified residue | 436 | 1 | Phosphoserine Ref.8 Ref.9 Ref.10 Ref.11 Ref.13 | |||||||||||||||||||||||||
| Modified residue | 710 | 1 | Phosphoserine Ref.9 | |||||||||||||||||||||||||
| Modified residue | 964 | 1 | Phosphoserine Ref.9 | |||||||||||||||||||||||||
| Modified residue | 1019 | 1 | Phosphoserine By similarity | |||||||||||||||||||||||||
| Modified residue | 1058 | 1 | Phosphoserine Ref.9 Ref.13 | |||||||||||||||||||||||||
Natural variations | ||||||||||||||||||||||||||||
| Alternative sequence | 212 – 246 | 35 | Missing in isoform 2 and isoform 3. | VSP_024834 | ||||||||||||||||||||||||
| Alternative sequence | 905 – 940 | 36 | Missing in isoform 3. | VSP_024835 | ||||||||||||||||||||||||
| Natural variant | 395 | 1 | R → T in a breast cancer sample; somatic mutation. Ref.15 | VAR_035913 | ||||||||||||||||||||||||
| Natural variant | 755 | 1 | K → Q. Corresponds to variant rs17432615 [ dbSNP | Ensembl ]. | VAR_031992 | ||||||||||||||||||||||||
Experimental info | ||||||||||||||||||||||||||||
| Sequence conflict | 105 | 1 | E → V in AAH29477. Ref.5 | |||||||||||||||||||||||||
| Sequence conflict | 112 | 1 | K → R in AAQ97141. Ref.2 | |||||||||||||||||||||||||
| Sequence conflict | 112 | 1 | K → R in CAD38814. Ref.3 | |||||||||||||||||||||||||
| Sequence conflict | 212 | 1 | E → G in AAQ97141. Ref.2 | |||||||||||||||||||||||||
| Sequence conflict | 212 | 1 | E → G in CAD38814. Ref.3 | |||||||||||||||||||||||||
| Sequence conflict | 256 | 1 | D → V in AAQ97141. Ref.2 | |||||||||||||||||||||||||
| Sequence conflict | 256 | 1 | D → V in CAD38814. Ref.3 | |||||||||||||||||||||||||
| Sequence conflict | 342 | 1 | R → G in AAQ97141. Ref.2 | |||||||||||||||||||||||||
| Sequence conflict | 342 | 1 | R → G in CAD38814. Ref.3 | |||||||||||||||||||||||||
Secondary structure | ||||||||||||||||||||||||||||
Helix Strand Turn | ||||||||||||||||||||||||||||
| Helix | 446 – 456 | 11 | ||||||||||||||||||||||||||
| Turn | 457 – 459 | 3 | ||||||||||||||||||||||||||
| Helix | 470 – 473 | 4 | ||||||||||||||||||||||||||
| Helix | 476 – 485 | 10 | ||||||||||||||||||||||||||
| Turn | 487 – 489 | 3 | ||||||||||||||||||||||||||
| Helix | 492 – 494 | 3 | ||||||||||||||||||||||||||
| Helix | 501 – 511 | 11 | ||||||||||||||||||||||||||
| Turn | 512 – 515 | 4 | ||||||||||||||||||||||||||
| Helix | 522 – 527 | 6 | ||||||||||||||||||||||||||
| Beta strand | 528 – 530 | 3 | ||||||||||||||||||||||||||
| Helix | 533 – 547 | 15 | ||||||||||||||||||||||||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "EHD2 and the novel EH domain binding protein EHBP1 couple endocytosis to the actin cytoskeleton." Guilherme A., Soriano N.A., Bose S., Holik J., Bose A., Pomerleau D.P., Furcinitti P., Leszyk J., Corvera S., Czech M.P. J. Biol. Chem. 279:10593-10605(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 2), FUNCTION, IDENTIFICATION BY MASS SPECTROMETRY, SUBCELLULAR LOCATION, INTERACTION WITH EHD2. |
| [2] | "Functional analysis of NACSIN (KIAA0903) in membrane trafficking." Castellano-Munoz M., Fernandez-Chacon R. Submitted (JUN-2003) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1). |
| [3] | "The full-ORF clone resource of the German cDNA consortium." Bechtel S., Rosenfelder H., Duda A., Schmidt C.P., Ernst U., Wellenreuther R., Mehrle A., Schuster C., Bahr A., Bloecker H., Heubner D., Hoerlein A., Michel G., Wedler H., Koehrer K., Ottenwaelder B., Poustka A., Wiemann S., Schupp I. BMC Genomics 8:399-399(2007) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1). Tissue: Kidney. |
| [4] | "Generation and annotation of the DNA sequences of human chromosomes 2 and 4." Hillier L.W., Graves T.A., Fulton R.S., Fulton L.A., Pepin K.H., Minx P., Wagner-McPherson C., Layman D., Wylie K., Sekhon M., Becker M.C., Fewell G.A., Delehaunty K.D., Miner T.L., Nash W.E., Kremitzki C., Oddy L., Du H. Wilson R.K.Nature 434:724-731(2005) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [5] | "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 3). Tissue: Placenta and Uterus. |
| [6] | "Complete sequencing and characterization of 21,243 full-length human cDNAs." Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S. Sugano S.Nat. Genet. 36:40-45(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 1-341 (ISOFORM 2). Tissue: Adipose tissue. |
| [7] | "Prediction of the coding sequences of unidentified human genes. XII. The complete sequences of 100 new cDNA clones from brain which code for large proteins in vitro." Nagase T., Ishikawa K., Suyama M., Kikuno R., Hirosawa M., Miyajima N., Tanaka A., Kotani H., Nomura N., Ohara O. DNA Res. 5:355-364(1998) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 270-1231. Tissue: Brain. |
| [8] | "Combining protein-based IMAC, peptide-based IMAC, and MudPIT for efficient phosphoproteomic analysis." Cantin G.T., Yi W., Lu B., Park S.K., Xu T., Lee J.-D., Yates J.R. III J. Proteome Res. 7:1346-1351(2008) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-436, MASS SPECTROMETRY. Tissue: Cervix carcinoma. |
| [9] | "A quantitative atlas of mitotic phosphorylation." Dephoure N., Zhou C., Villen J., Beausoleil S.A., Bakalarski C.E., Elledge S.J., Gygi S.P. Proc. Natl. Acad. Sci. U.S.A. 105:10762-10767(2008) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-171; SER-174; SER-177; SER-432; SER-436; SER-710; SER-964 AND SER-1058, MASS SPECTROMETRY. Tissue: Cervix carcinoma. |
| [10] | "Quantitative phosphoproteomic analysis of T cell receptor signaling reveals system-wide modulation of protein-protein interactions." Mayya V., Lundgren D.H., Hwang S.-I., Rezaul K., Wu L., Eng J.K., Rodionov V., Han D.K. Sci. Signal. 2:RA46-RA46(2009) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-171; SER-174; SER-432 AND SER-436, MASS SPECTROMETRY. Tissue: Leukemic T-cell. |
| [11] | "Quantitative phosphoproteomics reveals widespread full phosphorylation site occupancy during mitosis." Olsen J.V., Vermeulen M., Santamaria A., Kumar C., Miller M.L., Jensen L.J., Gnad F., Cox J., Jensen T.S., Nigg E.A., Brunak S., Mann M. Sci. Signal. 3:RA3-RA3(2010) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-171; SER-174 AND SER-436, MASS SPECTROMETRY. Tissue: Cervix carcinoma. |
| [12] | "Initial characterization of the human central proteome." Burkard T.R., Planyavsky M., Kaupe I., Breitwieser F.P., Buerckstuemmer T., Bennett K.L., Superti-Furga G., Colinge J. BMC Syst. Biol. 5:17-17(2011) [PubMed] [Europe PMC] [Abstract] Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]. |
| [13] | "System-wide temporal characterization of the proteome and phosphoproteome of human embryonic stem cell differentiation." Rigbolt K.T., Prokhorova T.A., Akimov V., Henningsen J., Johansen P.T., Kratchmarova I., Kassem M., Mann M., Olsen J.V., Blagoev B. Sci. Signal. 4:RS3-RS3(2011) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-436 AND SER-1058, MASS SPECTROMETRY. |
| [14] | "Solution structure of the CH domain from human EH domain binding protein 1." RIKEN structural genomics initiative (RSGI) Submitted (JUN-2006) to the PDB data bank Cited for: STRUCTURE BY NMR OF 443-548. |
| [15] | "The consensus coding sequences of human breast and colorectal cancers." Sjoeblom T., Jones S., Wood L.D., Parsons D.W., Lin J., Barber T.D., Mandelker D., Leary R.J., Ptak J., Silliman N., Szabo S., Buckhaults P., Farrell C., Meeh P., Markowitz S.D., Willis J., Dawson D., Willson J.K.V. Velculescu V.E.Science 314:268-274(2006) [PubMed] [Europe PMC] [Abstract] Cited for: VARIANT [LARGE SCALE ANALYSIS] THR-395. |
| [16] | "Common sequence variants on 2p15 and Xp11.22 confer susceptibility to prostate cancer." Gudmundsson J., Sulem P., Rafnar T., Bergthorsson J.T., Manolescu A., Gudbjartsson D., Agnarsson B.A., Sigurdsson A., Benediktsdottir K.R., Blondal T., Jakobsdottir M., Stacey S.N., Kostic J., Kristinsson K.T., Birgisdottir B., Ghosh S., Magnusdottir D.N., Thorlacius S. Stefansson K.Nat. Genet. 40:281-283(2008) [PubMed] [Europe PMC] [Abstract] Cited for: INVOLVEMENT IN SUSCEPTIBILITY TO HEREDITARY PROSTATE CANCER. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| EMBL GenBank DDBJ | AY531390 mRNA. Translation: AAS48537.1. AY331186 mRNA. Translation: AAQ97141.1. AL833968 mRNA. Translation: CAD38814.1. AC007098 Genomic DNA. Translation: AAY14789.1. AC009501 Genomic DNA. Translation: AAY24356.1. AC092567 Genomic DNA. Translation: AAX82024.1. BC029477 mRNA. Translation: AAH29477.1. BC067215 mRNA. Translation: AAH67215.1. AK000828 mRNA. Translation: BAA91391.1. Sequence problems. AB020710 mRNA. Translation: BAA74926.1. | ||||||||||||
| IPI | IPI00178187. IPI00433194. IPI00845271. | ||||||||||||
| RefSeq | NP_001136086.1. NM_001142614.1. NP_001136087.1. NM_001142615.2. NP_001136088.1. NM_001142616.1. NP_056067.2. NM_015252.3. | ||||||||||||
| UniGene | Hs.271667. | ||||||||||||
3D structure databases | |||||||||||||
| PDBe RCSB PDB PDBj |
| ||||||||||||
| ProteinModelPortal | Q8NDI1. | ||||||||||||
| ModBase | Search... | ||||||||||||
Protein-protein interaction databases | |||||||||||||
| IntAct | Q8NDI1. 3 interactions. | ||||||||||||
PTM databases | |||||||||||||
| PhosphoSite | Q8NDI1. | ||||||||||||
Polymorphism databases | |||||||||||||
| DMDM | 223590228. | ||||||||||||
Proteomic databases | |||||||||||||
| PaxDb | Q8NDI1. | ||||||||||||
| PRIDE | Q8NDI1. | ||||||||||||
Protocols and materials databases | |||||||||||||
| StructuralBiologyKnowledgebase | Search... | ||||||||||||
Genome annotation databases | |||||||||||||
| Ensembl | ENST00000263991; ENSP00000263991; ENSG00000115504. ENST00000354487; ENSP00000346482; ENSG00000115504. ENST00000405015; ENSP00000384143; ENSG00000115504. ENST00000405289; ENSP00000385524; ENSG00000115504. ENST00000431489; ENSP00000403783; ENSG00000115504. | ||||||||||||
| GeneID | 23301. | ||||||||||||
| KEGG | hsa:23301. | ||||||||||||
| UCSC | uc002sby.3. human. uc002sbz.3. human. uc002scb.3. human. | ||||||||||||
Organism-specific databases | |||||||||||||
| CTD | 23301. | ||||||||||||
| GeneCards | GC02P062844. | ||||||||||||
| H-InvDB | HIX0030395. | ||||||||||||
| HGNC | HGNC:29144. EHBP1. | ||||||||||||
| HPA | HPA035468. HPA035469. | ||||||||||||
| MIM | 609922. gene. 611868. phenotype. | ||||||||||||
| neXtProt | NX_Q8NDI1. | ||||||||||||
| PharmGKB | PA128394620. | ||||||||||||
| HUGE | Search... | ||||||||||||
| GenAtlas | Search... | ||||||||||||
Phylogenomic databases | |||||||||||||
| eggNOG | COG5069. | ||||||||||||
| HOVERGEN | HBG057909. | ||||||||||||
| InParanoid | Q8NDI1. | ||||||||||||
| OMA | KASGDEN. | ||||||||||||
| PhylomeDB | Q8NDI1. | ||||||||||||
Gene expression databases | |||||||||||||
| ArrayExpress | Q8NDI1. | ||||||||||||
| Bgee | Q8NDI1. | ||||||||||||
| Genevestigator | Q8NDI1. | ||||||||||||
Family and domain databases | |||||||||||||
| Gene3D | 1.10.418.10. 1 hit. | ||||||||||||
| InterPro | IPR001715. CH-domain. IPR022735. DUF3585. IPR019448. NT-C2. [Graphical view] | ||||||||||||
| Pfam | PF00307. CH. 1 hit. PF12130. DUF3585. 1 hit. PF10358. NT-C2. 1 hit. [Graphical view] | ||||||||||||
| SMART | SM00033. CH. 1 hit. [Graphical view] | ||||||||||||
| SUPFAM | SSF47576. Calponin-homology. 1 hit. | ||||||||||||
| PROSITE | PS50021. CH. 1 hit. [Graphical view] | ||||||||||||
| ProtoNet | Search... | ||||||||||||
Other | |||||||||||||
| ChiTaRS | EHBP1. human. | ||||||||||||
| EvolutionaryTrace | Q8NDI1. | ||||||||||||
| GenomeRNAi | 23301. | ||||||||||||
| NextBio | 45137. | ||||||||||||
| SOURCE | Search... | ||||||||||||
Entry information
| Entry name | EHBP1_HUMAN | ||||||||
| Accession | Primary (citable) accession number: Q8NDI1 Secondary accession number(s): O94977 Q9NWI9 | ||||||||
| Entry history |
| ||||||||
| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Chordata Protein Annotation Program | ||||||||
| Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. | ||||||||
Relevant documents
| Human chromosome 2 Human chromosome 2: entries, gene names and cross-references to MIM |
| Human entries with polymorphisms or disease mutations List of human entries with polymorphisms or disease mutations |
| Human polymorphisms and disease mutations Index of human polymorphisms and disease mutations |
| MIM cross-references Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot |
| PDB cross-references Index of Protein Data Bank (PDB) cross-references |
| SIMILARITY comments Index of protein domains and families |

Clusters with
