Q8ND76 (CCNY_HUMAN) Reviewed, UniProtKB/Swiss-Prot
Last modified
May 1, 2013.
Version 106.
History...
Names·Attributes·General annotation·Ontologies·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Cyclin-Y Short name=Cyc-Y Alternative name(s): Cyclin box protein 1 Cyclin fold protein 1 cyclin-X | ||||
| Gene names |
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| Organism | Homo sapiens (Human) [Reference proteome] | ||||
| Taxonomic identifier | 9606 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo![]() |
Protein attributes
| Sequence length | 341 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at protein level |
General annotation (Comments)
| Function | Positive regulatory subunit of the cyclin-dependent kinases CDK14/PFTK1 and CDK16. Acts as a cell-cycle regulator of Wnt signaling pathway during G2/M phase by recruiting CDK14/PFTK1 to the plasma membrane and promoting phosphorylation of LRP6, leading to the activation of the Wnt signaling pathway. Recruits CDK16 to the plasma membrane. Isoform 3 might play a role in the activation of MYC-mediated transcription. Ref.1 Ref.2 Ref.14 Ref.18 |
| Subunit structure | |
| Subcellular location | Cell membrane; Lipid-anchor; Cytoplasmic side Ref.1 Ref.2 Ref.14 Ref.18. |
| Tissue specificity | Widely expressed. Ref.2 |
| Developmental stage | Enriched at G2/M. Ref.14 |
| Post-translational modification | Ubiquitinated; leading to its degradation. Ref.14 |
| Sequence similarities | Belongs to the cyclin family. Cyclin Y subfamily. Contains 1 cyclin N-terminal domain. |
| Sequence caution | The sequence AAH69224.1 differs from that shown. Reason: Erroneous initiation. |
Ontologies
Alternative products
| This entry describes 3 isoforms produced by alternative splicing. [Align] [Select] | ||||||
| Isoform 1 (identifier: Q8ND76-1) Also known as: b; This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry. | ||||||
| Isoform 2 (identifier: Q8ND76-2) Also known as: a; The sequence of this isoform differs from the canonical sequence as follows: 52-76: Missing. | ||||||
| Isoform 3 (identifier: Q8ND76-3) The sequence of this isoform differs from the canonical sequence as follows: 1-54: Missing. |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 341 | 341 | Cyclin-Y | PRO_0000080514 | |||||
Regions | |||||||||
| Domain | 143 – 265 | 123 | Cyclin N-terminal | ||||||
Amino acid modifications | |||||||||
| Modified residue | 21 | 1 | Phosphoserine By similarity | ||||||
| Modified residue | 25 | 1 | Phosphoserine Ref.13 | ||||||
| Modified residue | 83 | 1 | Phosphoserine By similarity | ||||||
| Modified residue | 102 | 1 | Phosphoserine By similarity | ||||||
| Modified residue | 324 | 1 | Phosphoserine By similarity | ||||||
| Modified residue | 326 | 1 | Phosphoserine Ref.17 Ref.18 | ||||||
| Lipidation | 2 | 1 | N-myristoyl glycine Ref.1 Ref.14 | ||||||
Natural variations | |||||||||
| Alternative sequence | 1 – 54 | 54 | Missing in isoform 3. | VSP_014833 | |||||
| Alternative sequence | 52 – 76 | 25 | Missing in isoform 2. | VSP_014834 | |||||
Experimental info | |||||||||
| Mutagenesis | 2 | 1 | G → A: Induces a diffuse cytoplasmic localization. Ref.1 Ref.14 | ||||||
| Mutagenesis | 3 | 1 | N → A: No effect on subcellular location. Ref.1 | ||||||
| Sequence conflict | 78 | 1 | R → G in AAL78998. Ref.4 | ||||||
| Sequence conflict | 118 | 1 | Y → H in AAL78999. Ref.4 | ||||||
| Sequence conflict | 155 | 1 | S → C in AAS79427. Ref.1 | ||||||
| Sequence conflict | 155 | 1 | S → C in AAL07802. Ref.3 | ||||||
| Sequence conflict | 171 | 1 | I → M in AAS79427. Ref.1 | ||||||
| Sequence conflict | 171 | 1 | I → M in AAL07802. Ref.3 | ||||||
| Sequence conflict | 190 | 1 | I → V in BAB71409. Ref.5 | ||||||
| Sequence conflict | 216 | 1 | V → A in AAS79427. Ref.1 | ||||||
| Sequence conflict | 216 | 1 | V → A in AAL07802. Ref.3 | ||||||
| Sequence conflict | 250 | 1 | N → S in BAB71409. Ref.5 | ||||||
| Sequence conflict | 268 | 1 | S → F in AAS79427. Ref.1 | ||||||
| Sequence conflict | 268 | 1 | S → F in AAL07802. Ref.3 | ||||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "Cyclin Y, a novel membrane-associated cyclin, interacts with PFTK1." Jiang M., Gao Y., Yang T., Zhu X., Chen J. FEBS Lett. 583:2171-2178(2009) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1), FUNCTION, SUBCELLULAR LOCATION, INTERACTION WITH CDK14, MYRISTOYLATION AT GLY-2, MUTAGENESIS OF GLY-2 AND ASN-3. |
| [2] | "Identification and characterization of cyclin X which activates transcriptional activities of c-Myc." Li X., Wang X., Liu G., Li R., Yu L. Mol. Biol. Rep. 36:97-103(2009) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 3), FUNCTION, SUBCELLULAR LOCATION, TISSUE SPECIFICITY. Tissue: Testis. |
| [3] | "Identification and characterization of CBCP1, a novel gene located on human chromosome 10." Gong L., Wu K. Submitted (AUG-2001) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1). |
| [4] | "Human cyclin fold protein 1." Shannon M. Submitted (JAN-2002) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORMS 1 AND 2). |
| [5] | "Complete sequencing and characterization of 21,243 full-length human cDNAs." Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S. Sugano S.Nat. Genet. 36:40-45(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 3). Tissue: Testis. |
| [6] | "The full-ORF clone resource of the German cDNA consortium." Bechtel S., Rosenfelder H., Duda A., Schmidt C.P., Ernst U., Wellenreuther R., Mehrle A., Schuster C., Bahr A., Bloecker H., Heubner D., Hoerlein A., Michel G., Wedler H., Koehrer K., Ottenwaelder B., Poustka A., Wiemann S., Schupp I. BMC Genomics 8:399-399(2007) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1). Tissue: Brain. |
| [7] | "The DNA sequence and comparative analysis of human chromosome 10." Deloukas P., Earthrowl M.E., Grafham D.V., Rubenfield M., French L., Steward C.A., Sims S.K., Jones M.C., Searle S., Scott C., Howe K., Hunt S.E., Andrews T.D., Gilbert J.G.R., Swarbreck D., Ashurst J.L., Taylor A., Battles J. Rogers J.Nature 429:375-381(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [8] | Mural R.J., Istrail S., Sutton G.G., Florea L., Halpern A.L., Mobarry C.M., Lippert R., Walenz B., Shatkay H., Dew I., Miller J.R., Flanigan M.J., Edwards N.J., Bolanos R., Fasulo D., Halldorsson B.V., Hannenhalli S., Turner R. Venter J.C.Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [9] | "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORMS 1 AND 3). Tissue: Brain, Cerebellum, Neuroblastoma and Testis. |
| [10] | "Global, in vivo, and site-specific phosphorylation dynamics in signaling networks." Olsen J.V., Blagoev B., Gnad F., Macek B., Kumar C., Mortensen P., Mann M. Cell 127:635-648(2006) [PubMed] [Europe PMC] [Abstract] Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]. Tissue: Cervix carcinoma. |
| [11] | "Phosphorylation analysis of primary human T lymphocytes using sequential IMAC and titanium oxide enrichment." Carrascal M., Ovelleiro D., Casas V., Gay M., Abian J. J. Proteome Res. 7:5167-5176(2008) [PubMed] [Europe PMC] [Abstract] Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]. Tissue: T-cell. |
| [12] | "Phosphoproteome of resting human platelets." Zahedi R.P., Lewandrowski U., Wiesner J., Wortelkamp S., Moebius J., Schuetz C., Walter U., Gambaryan S., Sickmann A. J. Proteome Res. 7:526-534(2008) [PubMed] [Europe PMC] [Abstract] Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]. Tissue: Platelet. |
| [13] | "A quantitative atlas of mitotic phosphorylation." Dephoure N., Zhou C., Villen J., Beausoleil S.A., Bakalarski C.E., Elledge S.J., Gygi S.P. Proc. Natl. Acad. Sci. U.S.A. 105:10762-10767(2008) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-25, MASS SPECTROMETRY. Tissue: Cervix carcinoma. |
| [14] | "Cell cycle control of wnt receptor activation." Davidson G., Shen J., Huang Y.L., Su Y., Karaulanov E., Bartscherer K., Hassler C., Stannek P., Boutros M., Niehrs C. Dev. Cell 17:788-799(2009) [PubMed] [Europe PMC] [Abstract] Cited for: FUNCTION, SUBCELLULAR LOCATION, DEVELOPMENTAL STAGE, INTERACTION WITH CDK14 AND LRP6, UBIQUITINATION, MYRISTOYLATION AT GLY-2, MUTAGENESIS OF GLY-2. |
| [15] | "Large-scale proteomics analysis of the human kinome." Oppermann F.S., Gnad F., Olsen J.V., Hornberger R., Greff Z., Keri G., Mann M., Daub H. Mol. Cell. Proteomics 8:1751-1764(2009) [PubMed] [Europe PMC] [Abstract] Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]. |
| [16] | "Quantitative phosphoproteomics reveals widespread full phosphorylation site occupancy during mitosis." Olsen J.V., Vermeulen M., Santamaria A., Kumar C., Miller M.L., Jensen L.J., Gnad F., Cox J., Jensen T.S., Nigg E.A., Brunak S., Mann M. Sci. Signal. 3:RA3-RA3(2010) [PubMed] [Europe PMC] [Abstract] Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]. Tissue: Cervix carcinoma. |
| [17] | "System-wide temporal characterization of the proteome and phosphoproteome of human embryonic stem cell differentiation." Rigbolt K.T., Prokhorova T.A., Akimov V., Henningsen J., Johansen P.T., Kratchmarova I., Kassem M., Mann M., Olsen J.V., Blagoev B. Sci. Signal. 4:RS3-RS3(2011) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-326, MASS SPECTROMETRY. |
| [18] | "Cyclin-dependent kinase 16/PCTAIRE kinase 1 is activated by cyclin Y and is essential for spermatogenesis." Mikolcevic P., Sigl R., Rauch V., Hess M.W., Pfaller K., Barisic M., Pelliniemi L.J., Boesl M., Geley S. Mol. Cell. Biol. 32:868-879(2012) [PubMed] [Europe PMC] [Abstract] Cited for: FUNCTION, SUBCELLULAR LOCATION, INTERACTION WITH CDK16, PHOSPHORYLATION AT SER-326. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | AY504868 mRNA. Translation: AAS79427.1. AF429969 mRNA. Translation: AAP97301.1. AF413522 mRNA. Translation: AAL07802.1. AF465728 mRNA. Translation: AAL78998.1. AF465729 mRNA. Translation: AAL78999.1. AK057280 mRNA. Translation: BAB71409.1. AL834355 mRNA. Translation: CAD39020.2. AL592445, AL121749, AL603824 Genomic DNA. Translation: CAH70072.1. AL592445 AL117336 Genomic DNA. Translation: CAH70073.1.AL603824, AL121749, AL592445 Genomic DNA. Translation: CAH71567.1. AL603824 AL117336 Genomic DNA. Translation: CAH71568.1.AL117336 AL592445 Genomic DNA. Translation: CAH72501.1.AL121749, AL603824, AL592445 Genomic DNA. Translation: CAH73707.1. AL121749 AL117336 Genomic DNA. Translation: CAH73709.1.CH471072 Genomic DNA. Translation: EAW85912.1. CH471072 Genomic DNA. Translation: EAW85913.1. CH471072 Genomic DNA. Translation: EAW85914.1. BC069224 mRNA. Translation: AAH69224.1. Different initiation. BC094815 mRNA. Translation: AAH94815.1. BC104773 mRNA. Translation: AAI04774.1. BC104801 mRNA. Translation: AAI04802.1. BC143450 mRNA. Translation: AAI43451.1. BC143455 mRNA. Translation: AAI43456.1. |
| IPI | IPI00334743. IPI00413625. IPI00465457. |
| RefSeq | NP_659449.3. NM_145012.4. NP_859049.2. NM_181698.2. |
| UniGene | Hs.14745. Hs.651463. Hs.714184. |
3D structure databases | |
| ProteinModelPortal | Q8ND76. |
| ModBase | Search... |
Protein-protein interaction databases | |
| MINT | MINT-1649053. |
PTM databases | |
| PhosphoSite | Q8ND76. |
Polymorphism databases | |
| DMDM | 71658801. |
Proteomic databases | |
| PaxDb | Q8ND76. |
| PRIDE | Q8ND76. |
Protocols and materials databases | |
| DNASU | 219771. |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| Ensembl | ENST00000265375; ENSP00000265375; ENSG00000108100. ENST00000339497; ENSP00000344275; ENSG00000108100. ENST00000374704; ENSP00000363836; ENSG00000108100. ENST00000374706; ENSP00000363838; ENSG00000108100. ENST00000537547; ENSP00000439277; ENSG00000108100. |
| GeneID | 219771. |
| KEGG | hsa:219771. |
| UCSC | uc001iyu.4. human. uc009xmb.3. human. |
Organism-specific databases | |
| CTD | 219771. |
| GeneCards | GC10P035576. |
| HGNC | HGNC:23354. CCNY. |
| HPA | HPA036290. |
| MIM | 612786. gene. |
| neXtProt | NX_Q8ND76. |
| PharmGKB | PA162381980. |
| GenAtlas | Search... |
Phylogenomic databases | |
| eggNOG | NOG303674. |
| HOVERGEN | HBG058985. |
| InParanoid | Q8ND76. |
| OMA | YDKHDPE. |
| OrthoDB | EOG43JC51. |
| PhylomeDB | Q8ND76. |
Gene expression databases | |
| ArrayExpress | Q8ND76. |
| Bgee | Q8ND76. |
| CleanEx | HS_CCNY. |
| Genevestigator | Q8ND76. |
| GermOnline | ENSG00000108100. Homo sapiens. |
Family and domain databases | |
| Gene3D | 1.10.472.10. 1 hit. |
| InterPro | IPR013763. Cyclin-like. IPR006671. Cyclin_N. IPR012399. Cyclin_Y. [Graphical view] |
| Pfam | PF00134. Cyclin_N. 1 hit. [Graphical view] |
| PIRSF | PIRSF028934. Cyclin_CG14939. 1 hit. |
| SMART | SM00385. CYCLIN. 1 hit. [Graphical view] |
| SUPFAM | SSF47954. Cyclin_like. 1 hit. |
| PROSITE | PS00292. CYCLINS. False negative. [Graphical view] |
| ProtoNet | Search... |
Other | |
| ChiTaRS | CCNY. human. |
| GenomeRNAi | 219771. |
| NextBio | 90749. |
| SOURCE | Search... |
Entry information
| Entry name | CCNY_HUMAN | ||||||||
| Accession | Primary (citable) accession number: Q8ND76 Secondary accession number(s): B7ZKX9 Q96P45 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Chordata Protein Annotation Program | ||||||||
| Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. | ||||||||
Relevant documents
| Human chromosome 10 Human chromosome 10: entries, gene names and cross-references to MIM |
| MIM cross-references Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot |
| SIMILARITY comments Index of protein domains and families |

Clusters with
