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Q8NCB2

- CAMKV_HUMAN

UniProt

Q8NCB2 - CAMKV_HUMAN

Protein

CaM kinase-like vesicle-associated protein

Gene

CAMKV

Organism
Homo sapiens (Human)
Status
Reviewed - Annotation score: 4 out of 5- Experimental evidence at protein leveli
    • BLAST
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    • History
      Entry version 110 (01 Oct 2014)
      Sequence version 2 (19 Sep 2006)
      Previous versions | rss
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    Functioni

    Does not appear to have detectable kinase activity.

    Cofactori

    Calcium.By similarity

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. protein kinase activity Source: InterPro

    Keywords - Ligandi

    Calmodulin-binding

    Enzyme and pathway databases

    SignaLinkiQ8NCB2.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    CaM kinase-like vesicle-associated protein
    Gene namesi
    Name:CAMKV
    OrganismiHomo sapiens (Human)
    Taxonomic identifieri9606 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
    ProteomesiUP000005640: Chromosome 3

    Organism-specific databases

    HGNCiHGNC:28788. CAMKV.

    Subcellular locationi

    Cell membrane By similarity; Peripheral membrane protein By similarity. Cytoplasmic vesicle membrane By similarity; Peripheral membrane protein By similarity
    Note: Predominantly observed in association with the plasma membrane of soma and in neurites, both axons and dendrites. May be associated with vesicular structures By similarity.By similarity

    GO - Cellular componenti

    1. cytoplasmic vesicle membrane Source: UniProtKB-SubCell
    2. plasma membrane Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    Cell membrane, Cytoplasmic vesicle, Membrane

    Pathology & Biotechi

    Organism-specific databases

    PharmGKBiPA142672205.

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 501501CaM kinase-like vesicle-associated proteinPRO_0000250094Add
    BLAST

    Amino acid modifications

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Modified residuei459 – 4591PhosphothreonineBy similarity

    Keywords - PTMi

    Phosphoprotein

    Proteomic databases

    MaxQBiQ8NCB2.
    PaxDbiQ8NCB2.
    PRIDEiQ8NCB2.

    PTM databases

    PhosphoSiteiQ8NCB2.

    Expressioni

    Gene expression databases

    ArrayExpressiQ8NCB2.
    BgeeiQ8NCB2.
    CleanExiHS_CAMKV.
    GenevestigatoriQ8NCB2.

    Organism-specific databases

    HPAiCAB034931.
    HPA007656.

    Interactioni

    Subunit structurei

    Interacts with calmodulin, in the presence of calcium.By similarity

    Protein-protein interaction databases

    BioGridi122482. 6 interactions.
    IntActiQ8NCB2. 2 interactions.
    MINTiMINT-1379547.

    Structurei

    3D structure databases

    ProteinModelPortaliQ8NCB2.
    SMRiQ8NCB2. Positions 28-311.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Domains and Repeats

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Domaini24 – 286263Protein kinasePROSITE-ProRule annotationAdd
    BLAST

    Compositional bias

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Compositional biasi335 – 492158Ala-richAdd
    BLAST

    Domaini

    The protein kinase domain is predicted to be catalytically inactive.

    Sequence similaritiesi

    Contains 1 protein kinase domain.PROSITE-ProRule annotation

    Phylogenomic databases

    eggNOGiCOG0515.
    HOVERGENiHBG108055.
    InParanoidiQ8NCB2.
    KOiK08812.
    OMAiGYAQESQ.
    OrthoDBiEOG7WHH9K.
    PhylomeDBiQ8NCB2.
    TreeFamiTF314166.

    Family and domain databases

    InterProiIPR020636. Ca/CaM-dep_Ca-dep_prot_Kinase.
    IPR011009. Kinase-like_dom.
    IPR000719. Prot_kinase_dom.
    IPR002290. Ser/Thr_dual-sp_kinase_dom.
    [Graphical view]
    PANTHERiPTHR24347. PTHR24347. 1 hit.
    PfamiPF00069. Pkinase. 1 hit.
    [Graphical view]
    SMARTiSM00220. S_TKc. 1 hit.
    [Graphical view]
    SUPFAMiSSF56112. SSF56112. 1 hit.
    PROSITEiPS50011. PROTEIN_KINASE_DOM. 1 hit.
    [Graphical view]

    Sequences (3)i

    Sequence statusi: Complete.

    This entry describes 3 isoformsi produced by alternative splicing. Align

    Isoform 1 (identifier: Q8NCB2-1) [UniParc]FASTAAdd to Basket

    This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

    « Hide

    MPFGCVTLGD KKNYNQPSEV TDRYDLGQVI KTEEFCEIFR AKDKTTGKLH    50
    TCKKFQKRDG RKVRKAAKNE IGILKMVKHP NILQLVDVFV TRKEYFIFLE 100
    LATGREVFDW ILDQGYYSER DTSNVVRQVL EAVAYLHSLK IVHRNLKLEN 150
    LVYYNRLKNS KIVISDFHLA KLENGLIKEP CGTPEYLAPE VVGRQRYGRP 200
    VDCWAIGVIM YILLSGNPPF YEEVEEDDYE NHDKNLFRKI LAGDYEFDSP 250
    YWDDISQAAK DLVTRLMEVE QDQRITAEEA ISHEWISGNA ASDKNIKDGV 300
    CAQIEKNFAR AKWKKAVRVT TLMKRLRAPE QSSTAAAQSA SATDTATPGA 350
    AGGATAAAAS GATSAPEGDA ARAAKSDNVA PADRSATPAT DGSATPATDG 400
    SVTPATDGSI TPATDGSVTP ATDRSATPAT DGRATPATEE STVPTTQSSA 450
    MLATKAAATP EPAMAQPDST APEGATGQAP PSSKGEEAAG YAQESQREEA 500
    S 501
    Length:501
    Mass (Da):54,354
    Last modified:September 19, 2006 - v2
    Checksum:i1D6DBF8ABA0D1D70
    GO
    Isoform 2 (identifier: Q8NCB2-2) [UniParc]FASTAAdd to Basket

    The sequence of this isoform differs from the canonical sequence as follows:
         188-215: Missing.

    Show »
    Length:473
    Mass (Da):51,209
    Checksum:i8DF2CEE6C4F43262
    GO
    Isoform 3 (identifier: Q8NCB2-3) [UniParc]FASTAAdd to Basket

    The sequence of this isoform differs from the canonical sequence as follows:
         352-382: Missing.

    Note: No experimental confirmation available.

    Show »
    Length:470
    Mass (Da):51,687
    Checksum:i16CC94CED91EE893
    GO

    Experimental Info

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Sequence conflicti22 – 221D → G in CAG38539. 1 PublicationCurated
    Sequence conflicti64 – 641R → Q in BAC11528. (PubMed:14702039)Curated
    Sequence conflicti285 – 2851W → S in BAC11248. (PubMed:14702039)Curated

    Natural variant

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Natural varianti40 – 401R → W in a colorectal adenocarcinoma sample; somatic mutation. 1 Publication
    VAR_041337
    Natural varianti60 – 601G → S in an ovarian serous carcinoma sample; somatic mutation. 1 Publication
    VAR_041338
    Natural varianti274 – 2741R → W in a colorectal adenocarcinoma sample; somatic mutation. 1 Publication
    VAR_041339
    Natural varianti279 – 2791E → D.1 Publication
    Corresponds to variant rs56071455 [ dbSNP | Ensembl ].
    VAR_041340
    Natural varianti472 – 4721P → L.1 Publication
    Corresponds to variant rs56307047 [ dbSNP | Ensembl ].
    VAR_041341
    Natural varianti491 – 4911Y → C.1 Publication
    Corresponds to variant rs17849325 [ dbSNP | Ensembl ].
    VAR_027539

    Alternative sequence

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Alternative sequencei188 – 21528Missing in isoform 2. 2 PublicationsVSP_020600Add
    BLAST
    Alternative sequencei352 – 38231Missing in isoform 3. 1 PublicationVSP_020601Add
    BLAST

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AK074856 mRNA. Translation: BAC11248.1.
    AK074899 mRNA. Translation: BAC11278.1.
    AK075294 mRNA. Translation: BAC11528.1.
    AL136697 mRNA. Translation: CAB66632.1.
    CR533508 mRNA. Translation: CAG38539.1.
    AL833943 Transcribed RNA. Translation: CAD38798.2.
    AC105935 Genomic DNA. No translation available.
    CH471055 Genomic DNA. Translation: EAW65027.1.
    BC000497 mRNA. Translation: AAH00497.1.
    BC001921 mRNA. Translation: AAH01921.1.
    BC005828 mRNA. Translation: AAH05828.1.
    BC017363 mRNA. Translation: AAH17363.1.
    BC019256 mRNA. Translation: AAH19256.1.
    CCDSiCCDS33762.1. [Q8NCB2-1]
    RefSeqiNP_076951.2. NM_024046.3. [Q8NCB2-1]
    XP_005265535.1. XM_005265478.1. [Q8NCB2-3]
    UniGeneiHs.145156.

    Genome annotation databases

    EnsembliENST00000296471; ENSP00000296471; ENSG00000164076. [Q8NCB2-2]
    ENST00000477224; ENSP00000419195; ENSG00000164076. [Q8NCB2-1]
    ENST00000488336; ENSP00000418809; ENSG00000164076. [Q8NCB2-3]
    GeneIDi79012.
    KEGGihsa:79012.
    UCSCiuc003cxt.1. human. [Q8NCB2-1]
    uc003cxu.2. human. [Q8NCB2-3]
    uc003cxv.1. human. [Q8NCB2-2]

    Polymorphism databases

    DMDMi115311319.

    Keywords - Coding sequence diversityi

    Alternative splicing, Polymorphism

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AK074856 mRNA. Translation: BAC11248.1 .
    AK074899 mRNA. Translation: BAC11278.1 .
    AK075294 mRNA. Translation: BAC11528.1 .
    AL136697 mRNA. Translation: CAB66632.1 .
    CR533508 mRNA. Translation: CAG38539.1 .
    AL833943 Transcribed RNA. Translation: CAD38798.2 .
    AC105935 Genomic DNA. No translation available.
    CH471055 Genomic DNA. Translation: EAW65027.1 .
    BC000497 mRNA. Translation: AAH00497.1 .
    BC001921 mRNA. Translation: AAH01921.1 .
    BC005828 mRNA. Translation: AAH05828.1 .
    BC017363 mRNA. Translation: AAH17363.1 .
    BC019256 mRNA. Translation: AAH19256.1 .
    CCDSi CCDS33762.1. [Q8NCB2-1 ]
    RefSeqi NP_076951.2. NM_024046.3. [Q8NCB2-1 ]
    XP_005265535.1. XM_005265478.1. [Q8NCB2-3 ]
    UniGenei Hs.145156.

    3D structure databases

    ProteinModelPortali Q8NCB2.
    SMRi Q8NCB2. Positions 28-311.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    BioGridi 122482. 6 interactions.
    IntActi Q8NCB2. 2 interactions.
    MINTi MINT-1379547.

    PTM databases

    PhosphoSitei Q8NCB2.

    Polymorphism databases

    DMDMi 115311319.

    Proteomic databases

    MaxQBi Q8NCB2.
    PaxDbi Q8NCB2.
    PRIDEi Q8NCB2.

    Protocols and materials databases

    DNASUi 79012.
    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENST00000296471 ; ENSP00000296471 ; ENSG00000164076 . [Q8NCB2-2 ]
    ENST00000477224 ; ENSP00000419195 ; ENSG00000164076 . [Q8NCB2-1 ]
    ENST00000488336 ; ENSP00000418809 ; ENSG00000164076 . [Q8NCB2-3 ]
    GeneIDi 79012.
    KEGGi hsa:79012.
    UCSCi uc003cxt.1. human. [Q8NCB2-1 ]
    uc003cxu.2. human. [Q8NCB2-3 ]
    uc003cxv.1. human. [Q8NCB2-2 ]

    Organism-specific databases

    CTDi 79012.
    GeneCardsi GC03M049895.
    H-InvDB HIX0003323.
    HGNCi HGNC:28788. CAMKV.
    HPAi CAB034931.
    HPA007656.
    MIMi 614993. gene.
    neXtProti NX_Q8NCB2.
    PharmGKBi PA142672205.
    GenAtlasi Search...

    Phylogenomic databases

    eggNOGi COG0515.
    HOVERGENi HBG108055.
    InParanoidi Q8NCB2.
    KOi K08812.
    OMAi GYAQESQ.
    OrthoDBi EOG7WHH9K.
    PhylomeDBi Q8NCB2.
    TreeFami TF314166.

    Enzyme and pathway databases

    SignaLinki Q8NCB2.

    Miscellaneous databases

    ChiTaRSi CAMKV. human.
    GenomeRNAii 79012.
    NextBioi 67661.
    PROi Q8NCB2.
    SOURCEi Search...

    Gene expression databases

    ArrayExpressi Q8NCB2.
    Bgeei Q8NCB2.
    CleanExi HS_CAMKV.
    Genevestigatori Q8NCB2.

    Family and domain databases

    InterProi IPR020636. Ca/CaM-dep_Ca-dep_prot_Kinase.
    IPR011009. Kinase-like_dom.
    IPR000719. Prot_kinase_dom.
    IPR002290. Ser/Thr_dual-sp_kinase_dom.
    [Graphical view ]
    PANTHERi PTHR24347. PTHR24347. 1 hit.
    Pfami PF00069. Pkinase. 1 hit.
    [Graphical view ]
    SMARTi SM00220. S_TKc. 1 hit.
    [Graphical view ]
    SUPFAMi SSF56112. SSF56112. 1 hit.
    PROSITEi PS50011. PROTEIN_KINASE_DOM. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete sequencing and characterization of 21,243 full-length human cDNAs."
      Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S.
      , Yamamoto J., Saito K., Kawai Y., Isono Y., Nakamura Y., Nagahari K., Murakami K., Yasuda T., Iwayanagi T., Wagatsuma M., Shiratori A., Sudo H., Hosoiri T., Kaku Y., Kodaira H., Kondo H., Sugawara M., Takahashi M., Kanda K., Yokoi T., Furuya T., Kikkawa E., Omura Y., Abe K., Kamihara K., Katsuta N., Sato K., Tanikawa M., Yamazaki M., Ninomiya K., Ishibashi T., Yamashita H., Murakawa K., Fujimori K., Tanai H., Kimata M., Watanabe M., Hiraoka S., Chiba Y., Ishida S., Ono Y., Takiguchi S., Watanabe S., Yosida M., Hotuta T., Kusano J., Kanehori K., Takahashi-Fujii A., Hara H., Tanase T.-O., Nomura Y., Togiya S., Komai F., Hara R., Takeuchi K., Arita M., Imose N., Musashino K., Yuuki H., Oshima A., Sasaki N., Aotsuka S., Yoshikawa Y., Matsunawa H., Ichihara T., Shiohata N., Sano S., Moriya S., Momiyama H., Satoh N., Takami S., Terashima Y., Suzuki O., Nakagawa S., Senoh A., Mizoguchi H., Goto Y., Shimizu F., Wakebe H., Hishigaki H., Watanabe T., Sugiyama A., Takemoto M., Kawakami B., Yamazaki M., Watanabe K., Kumagai A., Itakura S., Fukuzumi Y., Fujimori Y., Komiyama M., Tashiro H., Tanigami A., Fujiwara T., Ono T., Yamada K., Fujii Y., Ozaki K., Hirao M., Ohmori Y., Kawabata A., Hikiji T., Kobatake N., Inagaki H., Ikema Y., Okamoto S., Okitani R., Kawakami T., Noguchi S., Itoh T., Shigeta K., Senba T., Matsumura K., Nakajima Y., Mizuno T., Morinaga M., Sasaki M., Togashi T., Oyama M., Hata H., Watanabe M., Komatsu T., Mizushima-Sugano J., Satoh T., Shirai Y., Takahashi Y., Nakagawa K., Okumura K., Nagase T., Nomura N., Kikuchi H., Masuho Y., Yamashita R., Nakai K., Yada T., Nakamura Y., Ohara O., Isogai T., Sugano S.
      Nat. Genet. 36:40-45(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORMS 1 AND 3).
      Tissue: Retinoblastoma and Teratocarcinoma.
    2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 2).
      Tissue: Brain.
    3. "Cloning of human full open reading frames in Gateway(TM) system entry vector (pDONR201)."
      Ebert L., Schick M., Neubert P., Schatten R., Henze S., Korn B.
      Submitted (JUN-2004) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 2).
    4. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1).
      Tissue: Brain.
    5. "The DNA sequence, annotation and analysis of human chromosome 3."
      Muzny D.M., Scherer S.E., Kaul R., Wang J., Yu J., Sudbrak R., Buhay C.J., Chen R., Cree A., Ding Y., Dugan-Rocha S., Gill R., Gunaratne P., Harris R.A., Hawes A.C., Hernandez J., Hodgson A.V., Hume J.
      , Jackson A., Khan Z.M., Kovar-Smith C., Lewis L.R., Lozado R.J., Metzker M.L., Milosavljevic A., Miner G.R., Morgan M.B., Nazareth L.V., Scott G., Sodergren E., Song X.-Z., Steffen D., Wei S., Wheeler D.A., Wright M.W., Worley K.C., Yuan Y., Zhang Z., Adams C.Q., Ansari-Lari M.A., Ayele M., Brown M.J., Chen G., Chen Z., Clendenning J., Clerc-Blankenburg K.P., Chen R., Chen Z., Davis C., Delgado O., Dinh H.H., Dong W., Draper H., Ernst S., Fu G., Gonzalez-Garay M.L., Garcia D.K., Gillett W., Gu J., Hao B., Haugen E., Havlak P., He X., Hennig S., Hu S., Huang W., Jackson L.R., Jacob L.S., Kelly S.H., Kube M., Levy R., Li Z., Liu B., Liu J., Liu W., Lu J., Maheshwari M., Nguyen B.-V., Okwuonu G.O., Palmeiri A., Pasternak S., Perez L.M., Phelps K.A., Plopper F.J., Qiang B., Raymond C., Rodriguez R., Saenphimmachak C., Santibanez J., Shen H., Shen Y., Subramanian S., Tabor P.E., Verduzco D., Waldron L., Wang J., Wang J., Wang Q., Williams G.A., Wong G.K.-S., Yao Z., Zhang J., Zhang X., Zhao G., Zhou J., Zhou Y., Nelson D., Lehrach H., Reinhardt R., Naylor S.L., Yang H., Olson M., Weinstock G., Gibbs R.A.
      Nature 440:1194-1198(2006) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    6. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    7. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
      The MGC Project Team
      Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1), VARIANT CYS-491.
      Tissue: Brain and Lung.
    8. "Patterns of somatic mutation in human cancer genomes."
      Greenman C., Stephens P., Smith R., Dalgliesh G.L., Hunter C., Bignell G., Davies H., Teague J., Butler A., Stevens C., Edkins S., O'Meara S., Vastrik I., Schmidt E.E., Avis T., Barthorpe S., Bhamra G., Buck G.
      , Choudhury B., Clements J., Cole J., Dicks E., Forbes S., Gray K., Halliday K., Harrison R., Hills K., Hinton J., Jenkinson A., Jones D., Menzies A., Mironenko T., Perry J., Raine K., Richardson D., Shepherd R., Small A., Tofts C., Varian J., Webb T., West S., Widaa S., Yates A., Cahill D.P., Louis D.N., Goldstraw P., Nicholson A.G., Brasseur F., Looijenga L., Weber B.L., Chiew Y.-E., DeFazio A., Greaves M.F., Green A.R., Campbell P., Birney E., Easton D.F., Chenevix-Trench G., Tan M.-H., Khoo S.K., Teh B.T., Yuen S.T., Leung S.Y., Wooster R., Futreal P.A., Stratton M.R.
      Nature 446:153-158(2007) [PubMed] [Europe PMC] [Abstract]
      Cited for: VARIANTS [LARGE SCALE ANALYSIS] TRP-40; SER-60; TRP-274; ASP-279 AND LEU-472.

    Entry informationi

    Entry nameiCAMKV_HUMAN
    AccessioniPrimary (citable) accession number: Q8NCB2
    Secondary accession number(s): A6NFD4
    , Q6FIB8, Q8NBS8, Q8NC85, Q8NDU4, Q8WTT8, Q9BQC9, Q9H0Q5
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: September 19, 2006
    Last sequence update: September 19, 2006
    Last modified: October 1, 2014
    This is version 110 of the entry and version 2 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programChordata Protein Annotation Program
    DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Human chromosome 3
      Human chromosome 3: entries, gene names and cross-references to MIM
    2. Human entries with polymorphisms or disease mutations
      List of human entries with polymorphisms or disease mutations
    3. Human polymorphisms and disease mutations
      Index of human polymorphisms and disease mutations
    4. MIM cross-references
      Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot
    5. Human and mouse protein kinases
      Human and mouse protein kinases: classification and index
    6. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3