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Protein

Uncharacterized protein C11orf72

Gene

C11orf72

Organism
Homo sapiens (Human)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein C11orf72
Gene namesi
OrganismiHomo sapiens (Human)
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
ProteomesiUP000005640: Unplaced

Organism-specific databases

HGNCiHGNC:26915. C11orf72.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 251251Uncharacterized protein C11orf72PRO_0000263095Add
BLAST

Proteomic databases

PaxDbiQ8NBR9.
PRIDEiQ8NBR9.

Expressioni

Gene expression databases

BgeeiQ8NBR9.
CleanExiHS_C11orf72.
GenevestigatoriQ8NBR9.

Organism-specific databases

HPAiHPA053460.

Structurei

3D structure databases

ProteinModelPortaliQ8NBR9.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiNOG119814.
HOGENOMiHOG000206541.
InParanoidiQ8NBR9.
OMAiTHPILCH.
OrthoDBiEOG70PBZF.
PhylomeDBiQ8NBR9.

Sequencei

Sequence statusi: Complete.

Q8NBR9-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MTQLPELGLR SPNNKSPTGP HPLEHLLARL LKRRRRSTLM SSPRSLLCSI
60 70 80 90 100
SGPGSHLLST HPILCHSVYQ PPQPASRPQA KRYQGLLPVP LAPHPLCLSG
110 120 130 140 150
QLYLPNIPCT VIDGCGPVIS HLKLTMYPWG LPPSHLGSSS PFSANMEQWD
160 170 180 190 200
YYKSQTRFAP FLPESFCGSP LPSEQSSRPF GLAFKVLCAA TCQPPQFQLL
210 220 230 240 250
WLCPYKLDLH QRICLPPNLA LVLLGALWTS PPPGSFLQPP YNRPYKLYKT

N
Length:251
Mass (Da):27,887
Last modified:October 1, 2002 - v1
Checksum:i33EFB734C0B6E419
GO

Natural variant

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Natural varianti22 – 221P → T.
Corresponds to variant rs12421329 [ dbSNP | Ensembl ].
VAR_029584

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK075315 mRNA. Translation: BAC11541.1.
AP003385 Genomic DNA. No translation available.
BC104448 mRNA. No translation available.
BC104449 mRNA. No translation available.
UniGeneiHs.382074.

Genome annotation databases

EnsembliENST00000333139; ENSP00000328640; ENSG00000184224.
ENST00000446232; ENSP00000416700; ENSG00000184224.
UCSCiuc001omi.1. human.

Keywords - Coding sequence diversityi

Polymorphism

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK075315 mRNA. Translation: BAC11541.1.
AP003385 Genomic DNA. No translation available.
BC104448 mRNA. No translation available.
BC104449 mRNA. No translation available.
UniGeneiHs.382074.

3D structure databases

ProteinModelPortaliQ8NBR9.
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

PaxDbiQ8NBR9.
PRIDEiQ8NBR9.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000333139; ENSP00000328640; ENSG00000184224.
ENST00000446232; ENSP00000416700; ENSG00000184224.
UCSCiuc001omi.1. human.

Organism-specific databases

GeneCardsiGC11M067372.
HGNCiHGNC:26915. C11orf72.
HPAiHPA053460.
neXtProtiNX_Q8NBR9.
GenAtlasiSearch...

Phylogenomic databases

eggNOGiNOG119814.
HOGENOMiHOG000206541.
InParanoidiQ8NBR9.
OMAiTHPILCH.
OrthoDBiEOG70PBZF.
PhylomeDBiQ8NBR9.

Gene expression databases

BgeeiQ8NBR9.
CleanExiHS_C11orf72.
GenevestigatoriQ8NBR9.

Family and domain databases

ProtoNetiSearch...

Publicationsi

  1. "Complete sequencing and characterization of 21,243 full-length human cDNAs."
    Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S.
    , Yamamoto J., Saito K., Kawai Y., Isono Y., Nakamura Y., Nagahari K., Murakami K., Yasuda T., Iwayanagi T., Wagatsuma M., Shiratori A., Sudo H., Hosoiri T., Kaku Y., Kodaira H., Kondo H., Sugawara M., Takahashi M., Kanda K., Yokoi T., Furuya T., Kikkawa E., Omura Y., Abe K., Kamihara K., Katsuta N., Sato K., Tanikawa M., Yamazaki M., Ninomiya K., Ishibashi T., Yamashita H., Murakawa K., Fujimori K., Tanai H., Kimata M., Watanabe M., Hiraoka S., Chiba Y., Ishida S., Ono Y., Takiguchi S., Watanabe S., Yosida M., Hotuta T., Kusano J., Kanehori K., Takahashi-Fujii A., Hara H., Tanase T.-O., Nomura Y., Togiya S., Komai F., Hara R., Takeuchi K., Arita M., Imose N., Musashino K., Yuuki H., Oshima A., Sasaki N., Aotsuka S., Yoshikawa Y., Matsunawa H., Ichihara T., Shiohata N., Sano S., Moriya S., Momiyama H., Satoh N., Takami S., Terashima Y., Suzuki O., Nakagawa S., Senoh A., Mizoguchi H., Goto Y., Shimizu F., Wakebe H., Hishigaki H., Watanabe T., Sugiyama A., Takemoto M., Kawakami B., Yamazaki M., Watanabe K., Kumagai A., Itakura S., Fukuzumi Y., Fujimori Y., Komiyama M., Tashiro H., Tanigami A., Fujiwara T., Ono T., Yamada K., Fujii Y., Ozaki K., Hirao M., Ohmori Y., Kawabata A., Hikiji T., Kobatake N., Inagaki H., Ikema Y., Okamoto S., Okitani R., Kawakami T., Noguchi S., Itoh T., Shigeta K., Senba T., Matsumura K., Nakajima Y., Mizuno T., Morinaga M., Sasaki M., Togashi T., Oyama M., Hata H., Watanabe M., Komatsu T., Mizushima-Sugano J., Satoh T., Shirai Y., Takahashi Y., Nakagawa K., Okumura K., Nagase T., Nomura N., Kikuchi H., Masuho Y., Yamashita R., Nakai K., Yada T., Nakamura Y., Ohara O., Isogai T., Sugano S.
    Nat. Genet. 36:40-45(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: Retinoblastoma.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
  3. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].

Entry informationi

Entry nameiCK072_HUMAN
AccessioniPrimary (citable) accession number: Q8NBR9
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 12, 2006
Last sequence update: October 1, 2002
Last modified: January 7, 2015
This is version 61 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Human chromosome 11
    Human chromosome 11: entries, gene names and cross-references to MIM
  2. Human entries with polymorphisms or disease mutations
    List of human entries with polymorphisms or disease mutations
  3. Human polymorphisms and disease mutations
    Index of human polymorphisms and disease mutations

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.