Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

Q8NA70

- FA47B_HUMAN

UniProt

Q8NA70 - FA47B_HUMAN

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein

Protein FAM47B

Gene

FAM47B

Organism
Homo sapiens (Human)
Status
Reviewed - Annotation score: 1 out of 5- Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Recommended name:
Protein FAM47B
Gene namesi
Name:FAM47B
OrganismiHomo sapiens (Human)
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
ProteomesiUP000005640: Chromosome X

Organism-specific databases

HGNCiHGNC:26659. FAM47B.

Pathology & Biotechi

Organism-specific databases

PharmGKBiPA134969396.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 645645Protein FAM47BPRO_0000187038Add
BLAST

Proteomic databases

PaxDbiQ8NA70.
PRIDEiQ8NA70.

PTM databases

PhosphoSiteiQ8NA70.

Expressioni

Gene expression databases

BgeeiQ8NA70.
CleanExiHS_FAM47B.
GenevestigatoriQ8NA70.

Organism-specific databases

HPAiHPA046829.
HPA050996.

Interactioni

Protein-protein interaction databases

BioGridi127993. 1 interaction.
IntActiQ8NA70. 1 interaction.
STRINGi9606.ENSP00000328307.

Structurei

3D structure databases

ProteinModelPortaliQ8NA70.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Compositional bias

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Compositional biasi189 – 324136Pro-richAdd
BLAST

Sequence similaritiesi

Belongs to the FAM47 family.Curated

Phylogenomic databases

eggNOGiNOG83278.
GeneTreeiENSGT00400000022396.
HOGENOMiHOG000112475.
HOVERGENiHBG076577.
InParanoidiQ8NA70.
OMAiFWESCPR.
OrthoDBiEOG7K0ZBC.
PhylomeDBiQ8NA70.
TreeFamiTF340932.

Sequencei

Sequence statusi: Complete.

Q8NA70-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MGDRRPQDRP RSQGMDSKPW YCDKPPSKYF AKRKHRRLRF PPVDTQNWVF
60 70 80 90 100
VTEGMDDFRY ACQSPEDTLV CRRDEFLLPK ISLRGPQADR KSRKKKLLKK
110 120 130 140 150
AALFSELSPV QPARKAFVEE VEAQLMTKHP LAMYPNLGKD MPPDLLLQVL
160 170 180 190 200
KQLDPERKLE DAWARCEARE KTTEVPTESG KYPCGESCPR PPETPVSRLR
210 220 230 240 250
PQLPKTPVSS RRPEPPKTRV SSLRPEPPKT RVSSLHPEPP ETRASHLRVD
260 270 280 290 300
PPETGVSHLC PEPPKTLVSS VHPEPPDTGA SHLCPEPPET RVSHLHPEPP
310 320 330 340 350
ETGVSHLRPE PSKTQVSSLC PEPPEAGVSH LCLEPPNTHR VSSFLLQVLK
360 370 380 390 400
LDSEKKLEDA RARCEGQEMT TEELTKPGKY HFWESCPRPF ESRMPHLRLV
410 420 430 440 450
LPITRRMASL CLKPPKTRRV SSLCPEPTKT GASHLKELFQ EDTPSTMECV
460 470 480 490 500
SDSLQRRHTS RKLRDFKWAG DLGVNEESIS SLFDFTPECR TTDQDQKIKK
510 520 530 540 550
ANECASRLMY GMELDDMDEV EFLRIKYWDR RRRAAPHSYS AQRGRIRYGP
560 570 580 590 600
WYFEPKLGKK LRSDEPLIDP KPVLEKPDEP DILDGLYGPI AFKDFILSKG
610 620 630 640
YRMPGVIEKL FAKKGWTYDS VKTPIQRAVQ VYKYKEDVTD ASKED
Length:645
Mass (Da):73,945
Last modified:July 19, 2005 - v2
Checksum:iF49BACE4627E3C5D
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti202 – 2021Q → H in AAH35026. (PubMed:15489334)Curated
Sequence conflicti220 – 2212VS → AP in BAC04056. (PubMed:14702039)Curated
Sequence conflicti299 – 2991P → S in BAC04056. (PubMed:14702039)Curated

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AK093101 mRNA. Translation: BAC04056.1.
AL645585 Genomic DNA. Translation: CAI41598.1.
BC035026 mRNA. Translation: AAH35026.1.
CCDSiCCDS14236.1.
RefSeqiNP_689844.2. NM_152631.2.
UniGeneiHs.197801.

Genome annotation databases

EnsembliENST00000329357; ENSP00000328307; ENSG00000189132.
GeneIDi170062.
KEGGihsa:170062.
UCSCiuc004ddi.2. human.

Polymorphism databases

DMDMi71151884.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AK093101 mRNA. Translation: BAC04056.1 .
AL645585 Genomic DNA. Translation: CAI41598.1 .
BC035026 mRNA. Translation: AAH35026.1 .
CCDSi CCDS14236.1.
RefSeqi NP_689844.2. NM_152631.2.
UniGenei Hs.197801.

3D structure databases

ProteinModelPortali Q8NA70.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

BioGridi 127993. 1 interaction.
IntActi Q8NA70. 1 interaction.
STRINGi 9606.ENSP00000328307.

PTM databases

PhosphoSitei Q8NA70.

Polymorphism databases

DMDMi 71151884.

Proteomic databases

PaxDbi Q8NA70.
PRIDEi Q8NA70.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENST00000329357 ; ENSP00000328307 ; ENSG00000189132 .
GeneIDi 170062.
KEGGi hsa:170062.
UCSCi uc004ddi.2. human.

Organism-specific databases

CTDi 170062.
GeneCardsi GC0XP034870.
HGNCi HGNC:26659. FAM47B.
HPAi HPA046829.
HPA050996.
neXtProti NX_Q8NA70.
PharmGKBi PA134969396.
GenAtlasi Search...

Phylogenomic databases

eggNOGi NOG83278.
GeneTreei ENSGT00400000022396.
HOGENOMi HOG000112475.
HOVERGENi HBG076577.
InParanoidi Q8NA70.
OMAi FWESCPR.
OrthoDBi EOG7K0ZBC.
PhylomeDBi Q8NA70.
TreeFami TF340932.

Miscellaneous databases

GenomeRNAii 170062.
NextBioi 88858.
PROi Q8NA70.

Gene expression databases

Bgeei Q8NA70.
CleanExi HS_FAM47B.
Genevestigatori Q8NA70.

Family and domain databases

ProtoNeti Search...

Publicationsi

  1. "Complete sequencing and characterization of 21,243 full-length human cDNAs."
    Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S.
    , Yamamoto J., Saito K., Kawai Y., Isono Y., Nakamura Y., Nagahari K., Murakami K., Yasuda T., Iwayanagi T., Wagatsuma M., Shiratori A., Sudo H., Hosoiri T., Kaku Y., Kodaira H., Kondo H., Sugawara M., Takahashi M., Kanda K., Yokoi T., Furuya T., Kikkawa E., Omura Y., Abe K., Kamihara K., Katsuta N., Sato K., Tanikawa M., Yamazaki M., Ninomiya K., Ishibashi T., Yamashita H., Murakawa K., Fujimori K., Tanai H., Kimata M., Watanabe M., Hiraoka S., Chiba Y., Ishida S., Ono Y., Takiguchi S., Watanabe S., Yosida M., Hotuta T., Kusano J., Kanehori K., Takahashi-Fujii A., Hara H., Tanase T.-O., Nomura Y., Togiya S., Komai F., Hara R., Takeuchi K., Arita M., Imose N., Musashino K., Yuuki H., Oshima A., Sasaki N., Aotsuka S., Yoshikawa Y., Matsunawa H., Ichihara T., Shiohata N., Sano S., Moriya S., Momiyama H., Satoh N., Takami S., Terashima Y., Suzuki O., Nakagawa S., Senoh A., Mizoguchi H., Goto Y., Shimizu F., Wakebe H., Hishigaki H., Watanabe T., Sugiyama A., Takemoto M., Kawakami B., Yamazaki M., Watanabe K., Kumagai A., Itakura S., Fukuzumi Y., Fujimori Y., Komiyama M., Tashiro H., Tanigami A., Fujiwara T., Ono T., Yamada K., Fujii Y., Ozaki K., Hirao M., Ohmori Y., Kawabata A., Hikiji T., Kobatake N., Inagaki H., Ikema Y., Okamoto S., Okitani R., Kawakami T., Noguchi S., Itoh T., Shigeta K., Senba T., Matsumura K., Nakajima Y., Mizuno T., Morinaga M., Sasaki M., Togashi T., Oyama M., Hata H., Watanabe M., Komatsu T., Mizushima-Sugano J., Satoh T., Shirai Y., Takahashi Y., Nakagawa K., Okumura K., Nagase T., Nomura N., Kikuchi H., Masuho Y., Yamashita R., Nakai K., Yada T., Nakamura Y., Ohara O., Isogai T., Sugano S.
    Nat. Genet. 36:40-45(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: Testis.
  2. "The DNA sequence of the human X chromosome."
    Ross M.T., Grafham D.V., Coffey A.J., Scherer S., McLay K., Muzny D., Platzer M., Howell G.R., Burrows C., Bird C.P., Frankish A., Lovell F.L., Howe K.L., Ashurst J.L., Fulton R.S., Sudbrak R., Wen G., Jones M.C.
    , Hurles M.E., Andrews T.D., Scott C.E., Searle S., Ramser J., Whittaker A., Deadman R., Carter N.P., Hunt S.E., Chen R., Cree A., Gunaratne P., Havlak P., Hodgson A., Metzker M.L., Richards S., Scott G., Steffen D., Sodergren E., Wheeler D.A., Worley K.C., Ainscough R., Ambrose K.D., Ansari-Lari M.A., Aradhya S., Ashwell R.I., Babbage A.K., Bagguley C.L., Ballabio A., Banerjee R., Barker G.E., Barlow K.F., Barrett I.P., Bates K.N., Beare D.M., Beasley H., Beasley O., Beck A., Bethel G., Blechschmidt K., Brady N., Bray-Allen S., Bridgeman A.M., Brown A.J., Brown M.J., Bonnin D., Bruford E.A., Buhay C., Burch P., Burford D., Burgess J., Burrill W., Burton J., Bye J.M., Carder C., Carrel L., Chako J., Chapman J.C., Chavez D., Chen E., Chen G., Chen Y., Chen Z., Chinault C., Ciccodicola A., Clark S.Y., Clarke G., Clee C.M., Clegg S., Clerc-Blankenburg K., Clifford K., Cobley V., Cole C.G., Conquer J.S., Corby N., Connor R.E., David R., Davies J., Davis C., Davis J., Delgado O., Deshazo D., Dhami P., Ding Y., Dinh H., Dodsworth S., Draper H., Dugan-Rocha S., Dunham A., Dunn M., Durbin K.J., Dutta I., Eades T., Ellwood M., Emery-Cohen A., Errington H., Evans K.L., Faulkner L., Francis F., Frankland J., Fraser A.E., Galgoczy P., Gilbert J., Gill R., Gloeckner G., Gregory S.G., Gribble S., Griffiths C., Grocock R., Gu Y., Gwilliam R., Hamilton C., Hart E.A., Hawes A., Heath P.D., Heitmann K., Hennig S., Hernandez J., Hinzmann B., Ho S., Hoffs M., Howden P.J., Huckle E.J., Hume J., Hunt P.J., Hunt A.R., Isherwood J., Jacob L., Johnson D., Jones S., de Jong P.J., Joseph S.S., Keenan S., Kelly S., Kershaw J.K., Khan Z., Kioschis P., Klages S., Knights A.J., Kosiura A., Kovar-Smith C., Laird G.K., Langford C., Lawlor S., Leversha M., Lewis L., Liu W., Lloyd C., Lloyd D.M., Loulseged H., Loveland J.E., Lovell J.D., Lozado R., Lu J., Lyne R., Ma J., Maheshwari M., Matthews L.H., McDowall J., McLaren S., McMurray A., Meidl P., Meitinger T., Milne S., Miner G., Mistry S.L., Morgan M., Morris S., Mueller I., Mullikin J.C., Nguyen N., Nordsiek G., Nyakatura G., O'dell C.N., Okwuonu G., Palmer S., Pandian R., Parker D., Parrish J., Pasternak S., Patel D., Pearce A.V., Pearson D.M., Pelan S.E., Perez L., Porter K.M., Ramsey Y., Reichwald K., Rhodes S., Ridler K.A., Schlessinger D., Schueler M.G., Sehra H.K., Shaw-Smith C., Shen H., Sheridan E.M., Shownkeen R., Skuce C.D., Smith M.L., Sotheran E.C., Steingruber H.E., Steward C.A., Storey R., Swann R.M., Swarbreck D., Tabor P.E., Taudien S., Taylor T., Teague B., Thomas K., Thorpe A., Timms K., Tracey A., Trevanion S., Tromans A.C., d'Urso M., Verduzco D., Villasana D., Waldron L., Wall M., Wang Q., Warren J., Warry G.L., Wei X., West A., Whitehead S.L., Whiteley M.N., Wilkinson J.E., Willey D.L., Williams G., Williams L., Williamson A., Williamson H., Wilming L., Woodmansey R.L., Wray P.W., Yen J., Zhang J., Zhou J., Zoghbi H., Zorilla S., Buck D., Reinhardt R., Poustka A., Rosenthal A., Lehrach H., Meindl A., Minx P.J., Hillier L.W., Willard H.F., Wilson R.K., Waterston R.H., Rice C.M., Vaudin M., Coulson A., Nelson D.L., Weinstock G., Sulston J.E., Durbin R.M., Hubbard T., Gibbs R.A., Beck S., Rogers J., Bentley D.R.
    Nature 434:325-337(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
  3. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: Testis.

Entry informationi

Entry nameiFA47B_HUMAN
AccessioniPrimary (citable) accession number: Q8NA70
Secondary accession number(s): Q5JQN5, Q6PIG3
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 19, 2005
Last sequence update: July 19, 2005
Last modified: October 29, 2014
This is version 80 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Human chromosome X
    Human chromosome X: entries, gene names and cross-references to MIM
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3