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Protein

Uncharacterized protein C9orf163

Gene

C9orf163

Organism
Homo sapiens (Human)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein C9orf163
Gene namesi
OrganismiHomo sapiens (Human)
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
ProteomesiUP000005640: Chromosome 9

Organism-specific databases

HGNCiHGNC:26718. C9orf163.

Pathology & Biotechi

Organism-specific databases

PharmGKBiPA144596496.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 203203Uncharacterized protein C9orf163PRO_0000288885Add
BLAST

Proteomic databases

PaxDbiQ8N9P6.
PRIDEiQ8N9P6.

Expressioni

Gene expression databases

BgeeiQ8N9P6.
CleanExiHS_C9orf163.
GenevestigatoriQ8N9P6.

Organism-specific databases

HPAiHPA044640.

Interactioni

Protein-protein interaction databases

BioGridi127642. 1 interaction.

Structurei

3D structure databases

ProteinModelPortaliQ8N9P6.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiNOG86143.
GeneTreeiENSGT00410000029564.
HOGENOMiHOG000111668.
InParanoidiQ8N9P6.
OMAiSETLWSH.
OrthoDBiEOG7R2BKX.
PhylomeDBiQ8N9P6.
TreeFamiTF354037.

Sequencei

Sequence statusi: Complete.

Q8N9P6-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MPGPLTCTPA WQGQGRAAAF LCCSFQRAGA VVGVPARWHR GRLSSQQRLR
60 70 80 90 100
SSLGGSHPCP QLGRRLVREG VISVPRQQGR RRCRESFSPA DVAPGPICSA
110 120 130 140 150
NICLSGVRFL TCLNRVREHV VGPSPSPAAP ICFFPVVEAL CTLRGRRCHC
160 170 180 190 200
LPFPKRGMQR WMLPLRRGAR LLPLASSKNP RARSPGLDPL GSSETLWSHR

GGH
Length:203
Mass (Da):22,154
Last modified:October 1, 2002 - v1
Checksum:iD27348E2B24FBBF2
GO

Natural variant

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Natural varianti5 – 51L → P.
Corresponds to variant rs34376913 [ dbSNP | Ensembl ].
VAR_032526

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK094098 mRNA. Translation: BAC04285.1.
AL592301 Genomic DNA. Translation: CAM19028.1.
BC117152 mRNA. Translation: AAI17153.1.
BC117154 mRNA. Translation: AAI17155.1.
CCDSiCCDS7001.1.
RefSeqiNP_689784.1. NM_152571.2.
UniGeneiHs.212613.

Genome annotation databases

EnsembliENST00000354376; ENSP00000346345; ENSG00000196366.
GeneIDi158055.
KEGGihsa:158055.
UCSCiuc004chy.3. human.

Keywords - Coding sequence diversityi

Polymorphism

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK094098 mRNA. Translation: BAC04285.1.
AL592301 Genomic DNA. Translation: CAM19028.1.
BC117152 mRNA. Translation: AAI17153.1.
BC117154 mRNA. Translation: AAI17155.1.
CCDSiCCDS7001.1.
RefSeqiNP_689784.1. NM_152571.2.
UniGeneiHs.212613.

3D structure databases

ProteinModelPortaliQ8N9P6.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi127642. 1 interaction.

Proteomic databases

PaxDbiQ8N9P6.
PRIDEiQ8N9P6.

Protocols and materials databases

DNASUi158055.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000354376; ENSP00000346345; ENSG00000196366.
GeneIDi158055.
KEGGihsa:158055.
UCSCiuc004chy.3. human.

Organism-specific databases

CTDi158055.
GeneCardsiGC09P139377.
HGNCiHGNC:26718. C9orf163.
HPAiHPA044640.
neXtProtiNX_Q8N9P6.
PharmGKBiPA144596496.
GenAtlasiSearch...

Phylogenomic databases

eggNOGiNOG86143.
GeneTreeiENSGT00410000029564.
HOGENOMiHOG000111668.
InParanoidiQ8N9P6.
OMAiSETLWSH.
OrthoDBiEOG7R2BKX.
PhylomeDBiQ8N9P6.
TreeFamiTF354037.

Miscellaneous databases

GenomeRNAii158055.
NextBioi87610.

Gene expression databases

BgeeiQ8N9P6.
CleanExiHS_C9orf163.
GenevestigatoriQ8N9P6.

Family and domain databases

ProtoNetiSearch...

Publicationsi

  1. "Complete sequencing and characterization of 21,243 full-length human cDNAs."
    Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S.
    , Yamamoto J., Saito K., Kawai Y., Isono Y., Nakamura Y., Nagahari K., Murakami K., Yasuda T., Iwayanagi T., Wagatsuma M., Shiratori A., Sudo H., Hosoiri T., Kaku Y., Kodaira H., Kondo H., Sugawara M., Takahashi M., Kanda K., Yokoi T., Furuya T., Kikkawa E., Omura Y., Abe K., Kamihara K., Katsuta N., Sato K., Tanikawa M., Yamazaki M., Ninomiya K., Ishibashi T., Yamashita H., Murakawa K., Fujimori K., Tanai H., Kimata M., Watanabe M., Hiraoka S., Chiba Y., Ishida S., Ono Y., Takiguchi S., Watanabe S., Yosida M., Hotuta T., Kusano J., Kanehori K., Takahashi-Fujii A., Hara H., Tanase T.-O., Nomura Y., Togiya S., Komai F., Hara R., Takeuchi K., Arita M., Imose N., Musashino K., Yuuki H., Oshima A., Sasaki N., Aotsuka S., Yoshikawa Y., Matsunawa H., Ichihara T., Shiohata N., Sano S., Moriya S., Momiyama H., Satoh N., Takami S., Terashima Y., Suzuki O., Nakagawa S., Senoh A., Mizoguchi H., Goto Y., Shimizu F., Wakebe H., Hishigaki H., Watanabe T., Sugiyama A., Takemoto M., Kawakami B., Yamazaki M., Watanabe K., Kumagai A., Itakura S., Fukuzumi Y., Fujimori Y., Komiyama M., Tashiro H., Tanigami A., Fujiwara T., Ono T., Yamada K., Fujii Y., Ozaki K., Hirao M., Ohmori Y., Kawabata A., Hikiji T., Kobatake N., Inagaki H., Ikema Y., Okamoto S., Okitani R., Kawakami T., Noguchi S., Itoh T., Shigeta K., Senba T., Matsumura K., Nakajima Y., Mizuno T., Morinaga M., Sasaki M., Togashi T., Oyama M., Hata H., Watanabe M., Komatsu T., Mizushima-Sugano J., Satoh T., Shirai Y., Takahashi Y., Nakagawa K., Okumura K., Nagase T., Nomura N., Kikuchi H., Masuho Y., Yamashita R., Nakai K., Yada T., Nakamura Y., Ohara O., Isogai T., Sugano S.
    Nat. Genet. 36:40-45(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: Adrenal gland.
  2. "DNA sequence and analysis of human chromosome 9."
    Humphray S.J., Oliver K., Hunt A.R., Plumb R.W., Loveland J.E., Howe K.L., Andrews T.D., Searle S., Hunt S.E., Scott C.E., Jones M.C., Ainscough R., Almeida J.P., Ambrose K.D., Ashwell R.I.S., Babbage A.K., Babbage S., Bagguley C.L.
    , Bailey J., Banerjee R., Barker D.J., Barlow K.F., Bates K., Beasley H., Beasley O., Bird C.P., Bray-Allen S., Brown A.J., Brown J.Y., Burford D., Burrill W., Burton J., Carder C., Carter N.P., Chapman J.C., Chen Y., Clarke G., Clark S.Y., Clee C.M., Clegg S., Collier R.E., Corby N., Crosier M., Cummings A.T., Davies J., Dhami P., Dunn M., Dutta I., Dyer L.W., Earthrowl M.E., Faulkner L., Fleming C.J., Frankish A., Frankland J.A., French L., Fricker D.G., Garner P., Garnett J., Ghori J., Gilbert J.G.R., Glison C., Grafham D.V., Gribble S., Griffiths C., Griffiths-Jones S., Grocock R., Guy J., Hall R.E., Hammond S., Harley J.L., Harrison E.S.I., Hart E.A., Heath P.D., Henderson C.D., Hopkins B.L., Howard P.J., Howden P.J., Huckle E., Johnson C., Johnson D., Joy A.A., Kay M., Keenan S., Kershaw J.K., Kimberley A.M., King A., Knights A., Laird G.K., Langford C., Lawlor S., Leongamornlert D.A., Leversha M., Lloyd C., Lloyd D.M., Lovell J., Martin S., Mashreghi-Mohammadi M., Matthews L., McLaren S., McLay K.E., McMurray A., Milne S., Nickerson T., Nisbett J., Nordsiek G., Pearce A.V., Peck A.I., Porter K.M., Pandian R., Pelan S., Phillimore B., Povey S., Ramsey Y., Rand V., Scharfe M., Sehra H.K., Shownkeen R., Sims S.K., Skuce C.D., Smith M., Steward C.A., Swarbreck D., Sycamore N., Tester J., Thorpe A., Tracey A., Tromans A., Thomas D.W., Wall M., Wallis J.M., West A.P., Whitehead S.L., Willey D.L., Williams S.A., Wilming L., Wray P.W., Young L., Ashurst J.L., Coulson A., Blocker H., Durbin R.M., Sulston J.E., Hubbard T., Jackson M.J., Bentley D.R., Beck S., Rogers J., Dunham I.
    Nature 429:369-374(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
  3. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: Lung.

Entry informationi

Entry nameiCI163_HUMAN
AccessioniPrimary (citable) accession number: Q8N9P6
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 29, 2007
Last sequence update: October 1, 2002
Last modified: January 7, 2015
This is version 73 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Human chromosome 9
    Human chromosome 9: entries, gene names and cross-references to MIM
  2. Human entries with polymorphisms or disease mutations
    List of human entries with polymorphisms or disease mutations
  3. Human polymorphisms and disease mutations
    Index of human polymorphisms and disease mutations

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.