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Protein

Golgin subfamily A member 6-like protein 1

Gene

GOLGA6L1

Organism
Homo sapiens (Human)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Recommended name:
Golgin subfamily A member 6-like protein 1
Gene namesi
OrganismiHomo sapiens (Human)
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
ProteomesiUP000005640 Componenti: Unplaced

Organism-specific databases

HGNCiHGNC:37444. GOLGA6L1.

Pathology & Biotechi

Polymorphism and mutation databases

DMDMi300669642.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 621621Golgin subfamily A member 6-like protein 1PRO_0000326027Add
BLAST

Proteomic databases

MaxQBiQ8N7Z2.
PaxDbiQ8N7Z2.
PRIDEiQ8N7Z2.

PTM databases

PhosphoSiteiQ8N7Z2.

Expressioni

Gene expression databases

BgeeiQ8N7Z2.

Organism-specific databases

HPAiHPA047733.

Interactioni

Protein-protein interaction databases

STRINGi9606.ENSP00000320207.

Structurei

3D structure databases

ProteinModelPortaliQ8N7Z2.
SMRiQ8N7Z2. Positions 130-175.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Coiled coil

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Coiled coili103 – 621519Sequence AnalysisAdd
BLAST

Compositional bias

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Compositional biasi8 – 4235His-richAdd
BLAST
Compositional biasi80 – 834Poly-Lys

Sequence similaritiesi

Belongs to the GOLGA6 family.Curated

Keywords - Domaini

Coiled coil

Phylogenomic databases

eggNOGiNOG12793.
HOGENOMiHOG000218631.
HOVERGENiHBG107946.
InParanoidiQ8N7Z2.
OrthoDBiEOG71P29T.
PhylomeDBiQ8N7Z2.

Family and domain databases

InterProiIPR026737. GOLGA6L.
[Graphical view]
PANTHERiPTHR23143. PTHR23143. 1 hit.

Sequencei

Sequence statusi: Complete.

Q8N7Z2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLMWPQPHLP THPHLPTHPH LPTHPHLPTH PHVPTHPHLP THPMMSKETR
60 70 80 90 100
QSKLAEAKEQ LTDHHPQTNP SVGTAASDTK KKKINNGTNP ETTTSGGCHS
110 120 130 140 150
PEDEQKASHQ HQEALRRELE AQVHTIRILT CQKTELQMAL YYSQHAVKQL
160 170 180 190 200
EGEARDLISR LHDSWKFAGE LEQALSAVAT QKKKADRYIE ELTKERDALS
210 220 230 240 250
LELYRNTITD EELKEKNAKL QEKLQLVESE KSEIQLNVKE LKRKLERAKL
260 270 280 290 300
LLPQQQLQAE ADHLGKELQS VSAKLQAQVE ENELWNRLNQ QQEEKMWRQE
310 320 330 340 350
EKIQEWEEKI QEQEEKIREQ EEKIREQEEK MRRQEEMMWE KEEKMRRQEE
360 370 380 390 400
MMWEKEEKMR RLEEMMWEKE EKIRELEEKM HEQEKIREQE EKRQEEEKIR
410 420 430 440 450
EQEKRQEQEA KMWRQEEKIR EQEEKIREQE KKMWRQEEKI HEQEKIREEE
460 470 480 490 500
KRQEQEEMWR QEEKIREQEE IWRQKEKMHE QEKIRKQEEK VWRQEEKMHD
510 520 530 540 550
QEEKIREQEE KMWRQEEKIR EQEEKIREQE EKIREQKEKI REQEEKIWEQ
560 570 580 590 600
EEKIREQEEM MQEQEEKMWE QEEKMCEQEE KMQEQEEKMR RQEEKMWEQE
610 620
VRLRQQEEKM QEHQEHLEAA I
Length:621
Mass (Da):77,076
Last modified:July 13, 2010 - v2
Checksum:i65743065F3BE7D78
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti485 – 4851R → W in AK097517 (PubMed:14702039).Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK097517 mRNA. No translation available.
AC116165 Genomic DNA. No translation available.
UniGeneiHs.531569.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK097517 mRNA. No translation available.
AC116165 Genomic DNA. No translation available.
UniGeneiHs.531569.

3D structure databases

ProteinModelPortaliQ8N7Z2.
SMRiQ8N7Z2. Positions 130-175.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9606.ENSP00000320207.

PTM databases

PhosphoSiteiQ8N7Z2.

Polymorphism and mutation databases

DMDMi300669642.

Proteomic databases

MaxQBiQ8N7Z2.
PaxDbiQ8N7Z2.
PRIDEiQ8N7Z2.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Organism-specific databases

GeneCardsiGC15P022736.
HGNCiHGNC:37444. GOLGA6L1.
HPAiHPA047733.
neXtProtiNX_Q8N7Z2.
GenAtlasiSearch...

Phylogenomic databases

eggNOGiNOG12793.
HOGENOMiHOG000218631.
HOVERGENiHBG107946.
InParanoidiQ8N7Z2.
OrthoDBiEOG71P29T.
PhylomeDBiQ8N7Z2.

Miscellaneous databases

PROiQ8N7Z2.

Gene expression databases

BgeeiQ8N7Z2.

Family and domain databases

InterProiIPR026737. GOLGA6L.
[Graphical view]
PANTHERiPTHR23143. PTHR23143. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Complete sequencing and characterization of 21,243 full-length human cDNAs."
    Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S.
    , Yamamoto J., Saito K., Kawai Y., Isono Y., Nakamura Y., Nagahari K., Murakami K., Yasuda T., Iwayanagi T., Wagatsuma M., Shiratori A., Sudo H., Hosoiri T., Kaku Y., Kodaira H., Kondo H., Sugawara M., Takahashi M., Kanda K., Yokoi T., Furuya T., Kikkawa E., Omura Y., Abe K., Kamihara K., Katsuta N., Sato K., Tanikawa M., Yamazaki M., Ninomiya K., Ishibashi T., Yamashita H., Murakawa K., Fujimori K., Tanai H., Kimata M., Watanabe M., Hiraoka S., Chiba Y., Ishida S., Ono Y., Takiguchi S., Watanabe S., Yosida M., Hotuta T., Kusano J., Kanehori K., Takahashi-Fujii A., Hara H., Tanase T.-O., Nomura Y., Togiya S., Komai F., Hara R., Takeuchi K., Arita M., Imose N., Musashino K., Yuuki H., Oshima A., Sasaki N., Aotsuka S., Yoshikawa Y., Matsunawa H., Ichihara T., Shiohata N., Sano S., Moriya S., Momiyama H., Satoh N., Takami S., Terashima Y., Suzuki O., Nakagawa S., Senoh A., Mizoguchi H., Goto Y., Shimizu F., Wakebe H., Hishigaki H., Watanabe T., Sugiyama A., Takemoto M., Kawakami B., Yamazaki M., Watanabe K., Kumagai A., Itakura S., Fukuzumi Y., Fujimori Y., Komiyama M., Tashiro H., Tanigami A., Fujiwara T., Ono T., Yamada K., Fujii Y., Ozaki K., Hirao M., Ohmori Y., Kawabata A., Hikiji T., Kobatake N., Inagaki H., Ikema Y., Okamoto S., Okitani R., Kawakami T., Noguchi S., Itoh T., Shigeta K., Senba T., Matsumura K., Nakajima Y., Mizuno T., Morinaga M., Sasaki M., Togashi T., Oyama M., Hata H., Watanabe M., Komatsu T., Mizushima-Sugano J., Satoh T., Shirai Y., Takahashi Y., Nakagawa K., Okumura K., Nagase T., Nomura N., Kikuchi H., Masuho Y., Yamashita R., Nakai K., Yada T., Nakamura Y., Ohara O., Isogai T., Sugano S.
    Nat. Genet. 36:40-45(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: Testis.
  2. "Analysis of the DNA sequence and duplication history of human chromosome 15."
    Zody M.C., Garber M., Sharpe T., Young S.K., Rowen L., O'Neill K., Whittaker C.A., Kamal M., Chang J.L., Cuomo C.A., Dewar K., FitzGerald M.G., Kodira C.D., Madan A., Qin S., Yang X., Abbasi N., Abouelleil A.
    , Arachchi H.M., Baradarani L., Birditt B., Bloom S., Bloom T., Borowsky M.L., Burke J., Butler J., Cook A., DeArellano K., DeCaprio D., Dorris L. III, Dors M., Eichler E.E., Engels R., Fahey J., Fleetwood P., Friedman C., Gearin G., Hall J.L., Hensley G., Johnson E., Jones C., Kamat A., Kaur A., Locke D.P., Madan A., Munson G., Jaffe D.B., Lui A., Macdonald P., Mauceli E., Naylor J.W., Nesbitt R., Nicol R., O'Leary S.B., Ratcliffe A., Rounsley S., She X., Sneddon K.M.B., Stewart S., Sougnez C., Stone S.M., Topham K., Vincent D., Wang S., Zimmer A.R., Birren B.W., Hood L., Lander E.S., Nusbaum C.
    Nature 440:671-675(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Entry informationi

Entry nameiGG6L1_HUMAN
AccessioniPrimary (citable) accession number: Q8N7Z2
Entry historyi
Integrated into UniProtKB/Swiss-Prot: March 18, 2008
Last sequence update: July 13, 2010
Last modified: June 24, 2015
This is version 74 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Human chromosome 15
    Human chromosome 15: entries, gene names and cross-references to MIM
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.