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Reviewed, UniProtKB/Swiss-Prot Q8N787 (CR030_HUMAN)

Last modified November 24, 2009. Version 39. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents

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Names and origin

Protein namesRecommended name:
    Transmembrane protein C18orf30
Gene names
Name: C18orf30
OrganismHomo sapiens (Human) [Complete proteome]
Taxonomic identifier9606 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo

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Protein attributes

Sequence length583 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existenceEvidence at transcript level.

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General annotation (Comments)

Subcellular location

Membrane; Multi-pass membrane protein Potential.

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Ontologies

Keywords
   Cellular componentMembrane
   DomainTransmembrane
   PTMGlycoprotein
   Technical termComplete proteome
Gene Ontology (GO)
   Cellular componentintegral to membrane

Inferred from electronic annotation. Source: UniProtKB-SubCell

Complete GO annotation...

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Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 583583Transmembrane protein C18orf30
PRO_0000079316

Regions

Transmembrane3 – 2321 Potential
Transmembrane45 – 6521 Potential
Transmembrane220 – 24021 Potential
Transmembrane246 – 26621 Potential
Transmembrane269 – 29123 Potential
Transmembrane341 – 36121 Potential
Transmembrane401 – 42323 Potential
Transmembrane427 – 44418 Potential
Transmembrane457 – 47923 Potential
Compositional bias140 – 18950Glu-rich

Amino acid modifications

Glycosylation281N-linked (GlcNAc...) Potential
Glycosylation2971N-linked (GlcNAc...) Potential
Glycosylation3011N-linked (GlcNAc...) Potential
Glycosylation3081N-linked (GlcNAc...) Potential
Glycosylation3181N-linked (GlcNAc...) Potential
Glycosylation3731N-linked (GlcNAc...) Potential

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Sequences

Sequence LengthMass (Da)Tools
Q8N787-1 [UniParc].

Last modified October 1, 2002. Version 1.
Checksum: 3245BB7C553C41A3

FASTA58367,987
        10         20         30         40         50         60 
MSVVIYTMLV LIFIYTYQFE DFPGLWQNMT GLKKEKLEDL GLKQFTVAEL FTRIFIPTSF 

        70         80         90        100        110        120 
LLVCILHLHY FHDRFLELTD LKSIPSKEDN TIYSHAKVNG RVYLIINSIK KKLPIHQNEL 

       130        140        150        160        170        180 
AHPEGSLPDL TMMHLTASLE KPEVRKLAEP GEEKLEGYSE KAQKGDLGKD SEESEEDGEE 

       190        200        210        220        230        240 
EEESEEEEET SDLRNKWHLV IDRLTVLFLK FLEYFHKLQV FMWWILELHI IKIVSSYIIW 

       250        260        270        280        290        300 
VSVKEVSLFN YVFLISWAFA LPYAKLRRLA SSVCTVWTCV IIVCKMSYQL QTIKPENFSV 

       310        320        330        340        350        360 
NCSLPNENQT NIPFNELNKS LLYSAPIDPT EWVGLRKSSP LLVYLRNNLL MLAILAFEVT 

       370        380        390        400        410        420 
IYRHQEYYRG RNNLTAPVSR TIFHDITRLH LDDGLINCAK YFINYFFYKF GLETCFLMSV 

       430        440        450        460        470        480 
NVIGQRMDFY AMIHACWLIA VLYRRRRKAI AEIWPKYCCF LACIITFQYF ICIGIPPAPC 

       490        500        510        520        530        540 
RDYPWRFKGA SFNDNIIKWL YFPDFIVRPN PVFLVYDFML LLCASLQRQI FEDENKAAVR 

       550        560        570        580 
IMAGDNVEIC MNLDAASFSQ HNPGATTATF VFTGIPSPSQ IKS

« Hide

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References

[1]"Complete sequencing and characterization of 21,243 full-length human cDNAs."
Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S. expand/collapse author list , Yamamoto J., Saito K., Kawai Y., Isono Y., Nakamura Y., Nagahari K., Murakami K., Yasuda T., Iwayanagi T., Wagatsuma M., Shiratori A., Sudo H., Hosoiri T., Kaku Y., Kodaira H., Kondo H., Sugawara M., Takahashi M., Kanda K., Yokoi T., Furuya T., Kikkawa E., Omura Y., Abe K., Kamihara K., Katsuta N., Sato K., Tanikawa M., Yamazaki M., Ninomiya K., Ishibashi T., Yamashita H., Murakawa K., Fujimori K., Tanai H., Kimata M., Watanabe M., Hiraoka S., Chiba Y., Ishida S., Ono Y., Takiguchi S., Watanabe S., Yosida M., Hotuta T., Kusano J., Kanehori K., Takahashi-Fujii A., Hara H., Tanase T.-O., Nomura Y., Togiya S., Komai F., Hara R., Takeuchi K., Arita M., Imose N., Musashino K., Yuuki H., Oshima A., Sasaki N., Aotsuka S., Yoshikawa Y., Matsunawa H., Ichihara T., Shiohata N., Sano S., Moriya S., Momiyama H., Satoh N., Takami S., Terashima Y., Suzuki O., Nakagawa S., Senoh A., Mizoguchi H., Goto Y., Shimizu F., Wakebe H., Hishigaki H., Watanabe T., Sugiyama A., Takemoto M., Kawakami B., Yamazaki M., Watanabe K., Kumagai A., Itakura S., Fukuzumi Y., Fujimori Y., Komiyama M., Tashiro H., Tanigami A., Fujiwara T., Ono T., Yamada K., Fujii Y., Ozaki K., Hirao M., Ohmori Y., Kawabata A., Hikiji T., Kobatake N., Inagaki H., Ikema Y., Okamoto S., Okitani R., Kawakami T., Noguchi S., Itoh T., Shigeta K., Senba T., Matsumura K., Nakajima Y., Mizuno T., Morinaga M., Sasaki M., Togashi T., Oyama M., Hata H., Watanabe M., Komatsu T., Mizushima-Sugano J., Satoh T., Shirai Y., Takahashi Y., Nakagawa K., Okumura K., Nagase T., Nomura N., Kikuchi H., Masuho Y., Yamashita R., Nakai K., Yada T., Nakamura Y., Ohara O., Isogai T., Sugano S.
Nat. Genet. 36:40-45(2004) [PubMed: 14702039] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Tissue: Brain.

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Cross-references

Sequence databases

AK098782 mRNA. Translation: BAC05412.1.
IPIIPI00410314.
UniGeneHs.651849

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRINGQ8N787.

PTM databases

PhosphoSiteQ8N787.

Proteomic databases

PRIDEQ8N787.

Genome annotation databases

EnsemblENST00000383408; ENSP00000372900; ENSG00000175388; Homo sapiens. [Genome view]
UCSCuc002kou.1. human.

Organism-specific databases

GeneCardsGC18M010721.
HGNCHGNC:27589. C18orf30.
PharmGKBPA134950001.
GenAtlasSearch...

Phylogenomic databases

HOGENOMQ8N787.
HOVERGENQ8N787.

Enzyme and pathway databases

BioCycCATTLE:ENSBTAG00000033892-MON.

Gene expression databases

ArrayExpressQ8N787.
BgeeQ8N787.
CleanExHS_FAM38B2.
GenevestigatorQ8N787.
GermOnlineENSG00000175388. Homo sapiens.

Family and domain databases

ProtoNetSearch...

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Entry information

Entry nameCR030_HUMAN
AccessionPrimary (citable) accession number: Q8N787
Entry history
Integrated into UniProtKB/Swiss-Prot: July 5, 2005
Last sequence update: October 1, 2002
Last modified: November 24, 2009
This is version 39 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation projectHPI (Human Proteome Initiative)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

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Relevant documents

Human chromosome 18

Human chromosome 18: entries, gene names and cross-references to MIM

Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents