##gff-version 3 Q8N2Q7 UniProtKB Signal peptide 1 45 . . . Ontology_term=ECO:0000255;evidence=ECO:0000255 Q8N2Q7 UniProtKB Chain 46 863 . . . ID=PRO_0000008640;Note=Neuroligin-1 Q8N2Q7 UniProtKB Topological domain 46 717 . . . Note=Extracellular;Ontology_term=ECO:0000255;evidence=ECO:0000255 Q8N2Q7 UniProtKB Transmembrane 718 738 . . . Note=Helical;Ontology_term=ECO:0000255;evidence=ECO:0000255 Q8N2Q7 UniProtKB Topological domain 739 863 . . . Note=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255 Q8N2Q7 UniProtKB Region 183 212 . . . Note=Disordered;Ontology_term=ECO:0000256;evidence=ECO:0000256|SAM:MobiDB-lite Q8N2Q7 UniProtKB Region 670 708 . . . Note=Disordered;Ontology_term=ECO:0000256;evidence=ECO:0000256|SAM:MobiDB-lite Q8N2Q7 UniProtKB Region 842 863 . . . Note=Disordered;Ontology_term=ECO:0000256;evidence=ECO:0000256|SAM:MobiDB-lite Q8N2Q7 UniProtKB Glycosylation 109 109 . . . Note=N-linked (GlcNAc...) (complex) asparagine;Ontology_term=ECO:0000250;evidence=ECO:0000250 Q8N2Q7 UniProtKB Glycosylation 323 323 . . . Note=N-linked (GlcNAc...) (complex) asparagine;Ontology_term=ECO:0000250;evidence=ECO:0000250 Q8N2Q7 UniProtKB Glycosylation 363 363 . . . Note=N-linked (GlcNAc...) (complex) asparagine;Ontology_term=ECO:0000250;evidence=ECO:0000250 Q8N2Q7 UniProtKB Glycosylation 567 567 . . . Note=N-linked (GlcNAc...) asparagine;Ontology_term=ECO:0000250;evidence=ECO:0000250 Q8N2Q7 UniProtKB Glycosylation 703 703 . . . Note=O-linked (GalNAc...) serine;Ontology_term=ECO:0000250;evidence=ECO:0000250 Q8N2Q7 UniProtKB Glycosylation 706 706 . . . Note=O-linked (GalNAc...) serine;Ontology_term=ECO:0000250;evidence=ECO:0000250 Q8N2Q7 UniProtKB Disulfide bond 117 153 . . . Ontology_term=ECO:0000250;evidence=ECO:0000250 Q8N2Q7 UniProtKB Disulfide bond 362 373 . . . Ontology_term=ECO:0000250;evidence=ECO:0000250 Q8N2Q7 UniProtKB Disulfide bond 532 566 . . . Ontology_term=ECO:0000250;evidence=ECO:0000250 Q8N2Q7 UniProtKB Alternative sequence 165 204 . . . ID=VSP_060231;Note=In isoform 2. Missing Q8N2Q7 UniProtKB Natural variant 25 863 . . . ID=VAR_084195;Note=In AUTS20%3B uncertain significance. Missing;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:30460678;Dbxref=PMID:30460678 Q8N2Q7 UniProtKB Natural variant 89 89 . . . ID=VAR_084196;Note=In AUTS20%3B risk factor for disease development%3B decreased function in dendritic spine formation%3B decreased protein abundance%3B does not localize to the plasma membrane but is retained in the endoplasmic reticulum. P->L;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:28841651;Dbxref=dbSNP:rs1751123722,PMID:28841651 Q8N2Q7 UniProtKB Natural variant 90 90 . . . ID=VAR_084197;Note=In AUTS20%3B uncertain significance%3B does not affect dendritic spine formation%3B no effect on protein abundance%3B no effect on subcellular localization. T->I;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:28841651;Dbxref=PMID:28841651 Q8N2Q7 UniProtKB Natural variant 309 309 . . . ID=VAR_084198;Note=In AUTS20%3B risk factor for disease development%3B decreased function in dendritic spine formation%3B decreased protein abundance%3B does not localize to the plasma membrane but is retained in the endoplasmic reticulum. L->P;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:28841651;Dbxref=PMID:28841651 Q8N2Q7 UniProtKB Natural variant 337 337 . . . ID=VAR_084199;Note=In AUTS20%3B risk factor for disease development%3B decreased function in dendritic spine formation%3B decreased protein abundance%3B does not localize to the plasma membrane but is retained in the endoplasmic reticulum. G->E;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:28841651;Dbxref=PMID:28841651 Q8N2Q7 UniProtKB Natural variant 756 756 . . . ID=VAR_084200;Note=Does not affect dendritic spine formation%3B does not affect localization to plasma membrane. R->H;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:28841651;Dbxref=PMID:28841651 Q8N2Q7 UniProtKB Natural variant 835 835 . . . ID=VAR_084201;Note=In AUTS20%3B risk factor for disease development%3B decreased function in dendritic spine formation%3B decreased protein abundance%3B does not affect subcellular location. H->Y;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:28841651;Dbxref=PMID:28841651 Q8N2Q7 UniProtKB Sequence conflict 734 734 . . . Note=F->L;Ontology_term=ECO:0000305;evidence=ECO:0000305 Q8N2Q7 UniProtKB Beta strand 54 57 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:5OJK Q8N2Q7 UniProtKB Beta strand 60 63 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:5OJK Q8N2Q7 UniProtKB Beta strand 65 67 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:5OJK Q8N2Q7 UniProtKB Beta strand 72 74 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:5OJ6 Q8N2Q7 UniProtKB Beta strand 77 84 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:5OJK Q8N2Q7 UniProtKB Helix 91 93 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:5OJK Q8N2Q7 UniProtKB Beta strand 105 109 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:5OJK Q8N2Q7 UniProtKB Beta strand 122 125 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:5OJ6 Q8N2Q7 UniProtKB Turn 128 130 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:5OJK Q8N2Q7 UniProtKB Helix 133 137 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:5OJK Q8N2Q7 UniProtKB Helix 139 144 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:5OJK Q8N2Q7 UniProtKB Beta strand 147 149 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:5OJK Q8N2Q7 UniProtKB Beta strand 155 160 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:5OJK Q8N2Q7 UniProtKB Beta strand 213 218 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:5OJK Q8N2Q7 UniProtKB Beta strand 222 226 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:5OJK Q8N2Q7 UniProtKB Helix 229 231 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:5OJK Q8N2Q7 UniProtKB Helix 235 241 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:5OJK Q8N2Q7 UniProtKB Beta strand 243 248 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:5OJK Q8N2Q7 UniProtKB Helix 253 257 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:5OJK Q8N2Q7 UniProtKB Beta strand 261 264 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:5OJK Q8N2Q7 UniProtKB Helix 269 284 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:5OJK Q8N2Q7 UniProtKB Helix 285 288 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:5OJK Q8N2Q7 UniProtKB Beta strand 290 300 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:5OJK Q8N2Q7 UniProtKB Helix 302 311 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:5OJK Q8N2Q7 UniProtKB Helix 314 316 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:5OJK Q8N2Q7 UniProtKB Beta strand 327 336 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:5OJK Q8N2Q7 UniProtKB Beta strand 339 341 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:5OJK Q8N2Q7 UniProtKB Helix 349 359 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:5OJK Q8N2Q7 UniProtKB Helix 367 374 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:5OJK Q8N2Q7 UniProtKB Helix 379 383 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:5OJK Q8N2Q7 UniProtKB Beta strand 395 397 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:5OJK Q8N2Q7 UniProtKB Beta strand 402 405 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:5OJK Q8N2Q7 UniProtKB Helix 409 414 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:5OJK Q8N2Q7 UniProtKB Beta strand 422 428 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:5OJK Q8N2Q7 UniProtKB Turn 429 432 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:5OJK Q8N2Q7 UniProtKB Helix 433 436 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:5OJK Q8N2Q7 UniProtKB Turn 437 439 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:5OJK Q8N2Q7 UniProtKB Beta strand 442 444 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:5OJK Q8N2Q7 UniProtKB Helix 448 462 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:5OJK Q8N2Q7 UniProtKB Beta strand 466 468 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:5OJ6 Q8N2Q7 UniProtKB Helix 469 479 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:5OJK Q8N2Q7 UniProtKB Helix 483 485 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:5OJK Q8N2Q7 UniProtKB Helix 489 504 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:5OJK Q8N2Q7 UniProtKB Helix 506 518 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:5OJK Q8N2Q7 UniProtKB Beta strand 523 528 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:5OJK Q8N2Q7 UniProtKB Turn 545 548 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:5OJK Q8N2Q7 UniProtKB Helix 549 553 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:5OJK Q8N2Q7 UniProtKB Helix 555 558 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:5OJK Q8N2Q7 UniProtKB Beta strand 562 564 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:5OJK Q8N2Q7 UniProtKB Helix 570 589 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:5OJK Q8N2Q7 UniProtKB Beta strand 594 596 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:5OJ6 Q8N2Q7 UniProtKB Turn 609 612 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:5OJ6 Q8N2Q7 UniProtKB Turn 620 622 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:5OJK Q8N2Q7 UniProtKB Beta strand 624 631 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:5OJK Q8N2Q7 UniProtKB Beta strand 633 637 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:5OJK Q8N2Q7 UniProtKB Helix 640 647 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:5OJK Q8N2Q7 UniProtKB Helix 649 652 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:5OJK Q8N2Q7 UniProtKB Turn 653 655 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:5OJ6