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Protein
Submitted name:

cDNA PSEC0236 fis, clone HEMBA1007104, highly similar to Laminin gamma-3 chain

Gene
N/A
Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Submitted name:
cDNA PSEC0236 fis, clone HEMBA1007104, highly similar to Laminin gamma-3 chainImported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Pathology & Biotechi

Organism-specific databases

PharmGKBiPA30282.

PTM / Processingi

Proteomic databases

PRIDEiQ8N2D6.

Structurei

3D structure databases

ProteinModelPortaliQ8N2D6.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000286017.
KOiK06247.

Family and domain databases

Gene3Di2.60.120.260. 1 hit.
InterProiIPR002049. EGF_laminin.
IPR008979. Galactose-bd-like.
IPR008211. Laminin_N.
[Graphical view]
PfamiPF00053. Laminin_EGF. 4 hits.
PF00055. Laminin_N. 1 hit.
[Graphical view]
SMARTiSM00180. EGF_Lam. 4 hits.
SM00136. LamNT. 1 hit.
[Graphical view]
PROSITEiPS01248. EGF_LAM_1. 4 hits.
PS50027. EGF_LAM_2. 4 hits.
PS51117. LAMININ_NTER. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q8N2D6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAAAALLLGL ALLAPRAAGA GMGACYDGAG RPQRCLPVFE NAAFGRLAQA
60 70 80 90 100
SHTCGSPPED FCPHVGAAGA GAHCQRCDAA DPQRHHNASY LTDFHSQDES
110 120 130 140 150
TWWQSPSMAF GVQYPTSVNI TLRLGKAYEI TYVRLKFHTS RPESFAIYKR
160 170 180 190 200
SRADGPWEPY QFYSASCQKT YGRPEGQCLR PGEDERVAFC TSEFSDISPL
210 220 230 240 250
SGGNVAFSTL EGRPSAYNFE ESPGLQEWVT STELLISLDR LNTFGDDIFK
260 270 280 290 300
DPKVLQSYYY AVSDFSVGGR CKCNGHASEC GPDVAGQLAC RCQHNTTGTD
310 320 330 340 350
CERCLPFFQD RPWARGTAEA AHECLPCNCS GRSEECTFDR ELFRSTGHGG
360 370 380 390 400
RCHHCRDHTA GPHCERCQEN FYHWDPRMPC QPCDCQSAGS LHLQCDDTGT
410 420 430 440 450
CACKPTVTGW KCDRCLPGFH SLSEGGCRPC TCNPAGSLDT CDPRSGRCPC
460 470 480 490 500
KENVEGNLCD RCRPGTFNLQ PHNPSSRSCR SRASRVTSPR SAPTNRTWRP
510 520
FCTACPRTVP AGSEGCPDPR HTLPHLLFT
Length:529
Mass (Da):57,969
Last modified:September 30, 2002 - v1
Checksum:i281138B9D63FAF4D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK075536 mRNA. Translation: BAC11679.1.
RefSeqiNP_006050.3. NM_006059.3.
UniGeneiHs.201805.

Genome annotation databases

GeneIDi10319.
KEGGihsa:10319.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK075536 mRNA. Translation: BAC11679.1.
RefSeqiNP_006050.3. NM_006059.3.
UniGeneiHs.201805.

3D structure databases

ProteinModelPortaliQ8N2D6.
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

PRIDEiQ8N2D6.

Protocols and materials databases

DNASUi10319.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi10319.
KEGGihsa:10319.

Organism-specific databases

CTDi10319.
PharmGKBiPA30282.

Phylogenomic databases

HOGENOMiHOG000286017.
KOiK06247.

Miscellaneous databases

GenomeRNAii10319.
NextBioi39119.

Family and domain databases

Gene3Di2.60.120.260. 1 hit.
InterProiIPR002049. EGF_laminin.
IPR008979. Galactose-bd-like.
IPR008211. Laminin_N.
[Graphical view]
PfamiPF00053. Laminin_EGF. 4 hits.
PF00055. Laminin_N. 1 hit.
[Graphical view]
SMARTiSM00180. EGF_Lam. 4 hits.
SM00136. LamNT. 1 hit.
[Graphical view]
PROSITEiPS01248. EGF_LAM_1. 4 hits.
PS50027. EGF_LAM_2. 4 hits.
PS51117. LAMININ_NTER. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Signal sequence and keyword trap in silico for selection of full-length human cDNAs encoding secretion or membrane proteins from oligo-capped cDNA libraries."
    Otsuki T., Ota T., Nishikawa T., Hayashi K., Suzuki Y., Yamamoto J., Wakamatsu A., Kimura K., Sakamoto K., Hatano N., Kawai Y., Ishii S., Saito K., Kojima S., Sugiyama T., Ono T., Okano K., Yoshikawa Y.
    , Aotsuka S., Sasaki N., Hattori A., Okumura K., Nagai K., Sugano S., Isogai T.
    DNA Res. 12:117-126(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Tissue: Whole embryoImported.

Entry informationi

Entry nameiQ8N2D6_HUMAN
AccessioniPrimary (citable) accession number: Q8N2D6
Entry historyi
Integrated into UniProtKB/TrEMBL: September 30, 2002
Last sequence update: September 30, 2002
Last modified: September 30, 2014
This is version 77 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.