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Protein

Putative uncharacterized protein LRRC75A-AS1, mitochondrial

Gene

LRRC75A-AS1

Organism
Homo sapiens (Human)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein uncertaini

Names & Taxonomyi

Protein namesi
Recommended name:
Putative uncharacterized protein LRRC75A-AS1, mitochondrial
Alternative name(s):
FAM211A antisense RNA 1
LRRC75A antisense RNA 1
Putative uncharacterized protein FAM211A-AS1, mitochondrial
Gene namesi
Name:LRRC75A-AS1
Synonyms:C17orf45, C17orf76-AS1, FAM211A-AS1, NCRNA00188
OrganismiHomo sapiens (Human)
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Unplaced

Organism-specific databases

HGNCiHGNC:28619. LRRC75A-AS1.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Mitochondrion

Pathology & Biotechi

Organism-specific databases

PharmGKBiPA165432227.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transit peptidei1 – 3636MitochondrionSequence analysisAdd
BLAST
Chaini37 – 13094Putative uncharacterized protein LRRC75A-AS1, mitochondrialPRO_0000286564Add
BLAST

Proteomic databases

PRIDEiQ8N1F1.

Expressioni

Gene expression databases

CleanExiHS_C17orf45.

Interactioni

Binary interactionsi

WithEntry#Exp.IntActNotes
RBPMSQ930623EBI-2872544,EBI-740322

Protein-protein interaction databases

IntActiQ8N1F1. 3 interactions.
MINTiMINT-8247518.

Structurei

3D structure databases

ProteinModelPortaliQ8N1F1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

Transit peptide

Phylogenomic databases

InParanoidiQ8N1F1.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q8N1F1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MFPGSLSRGR RAAVEMAWLP GSCARVAFAA GAAARYWTAW QGSAGPNPAA
60 70 80 90 100
VAEAHGSLFC GRATSARAWS LRRPGPGSPA HSGGVQTREN WIAYPLQSAE
110 120 130
DGVATRLQIR EESASCLAAE YWSQEPAMRF
Length:130
Mass (Da):13,824
Last modified:October 1, 2002 - v1
Checksum:i1F4AAFED1A7FBC04
GO

Natural variant

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Natural varianti36 – 361Y → C.
Corresponds to variant rs35517418 [ dbSNP | Ensembl ].
VAR_032120
Natural varianti78 – 781S → T.
Corresponds to variant rs35752829 [ dbSNP | Ensembl ].
VAR_032121

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC027986 mRNA. Translation: AAH27986.1.
BC040159 mRNA. Translation: AAH40159.1.
UniGeneiHs.368934.

Keywords - Coding sequence diversityi

Polymorphism

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC027986 mRNA. Translation: AAH27986.1.
BC040159 mRNA. Translation: AAH40159.1.
UniGeneiHs.368934.

3D structure databases

ProteinModelPortaliQ8N1F1.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

IntActiQ8N1F1. 3 interactions.
MINTiMINT-8247518.

Proteomic databases

PRIDEiQ8N1F1.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Organism-specific databases

GeneCardsiLRRC75A-AS1.
HGNCiHGNC:28619. LRRC75A-AS1.
neXtProtiNX_Q8N1F1.
PharmGKBiPA165432227.
GenAtlasiSearch...

Phylogenomic databases

InParanoidiQ8N1F1.

Gene expression databases

CleanExiHS_C17orf45.

Family and domain databases

ProtoNetiSearch...

Entry informationi

Entry nameiC1AS1_HUMAN
AccessioniPrimary (citable) accession number: Q8N1F1
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 15, 2007
Last sequence update: October 1, 2002
Last modified: March 16, 2016
This is version 84 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Caution

Product of a dubious CDS prediction. Probable non-coding RNA.Curated

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Human chromosome 17
    Human chromosome 17: entries, gene names and cross-references to MIM
  2. Human entries with polymorphisms or disease mutations
    List of human entries with polymorphisms or disease mutations
  3. Human polymorphisms and disease mutations
    Index of human polymorphisms and disease mutations

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.