Q8N103 (TAGAP_HUMAN) Reviewed, UniProtKB/Swiss-Prot
Last modified
January 25, 2012.
Version 76.
History...
Names·Attributes·General annotation·Ontologies·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: T-cell activation Rho GTPase-activating protein Alternative name(s): T-cell activation GTPase-activating protein | ||||||
| Gene names |
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| Organism | Homo sapiens (Human) | ||||||
| Taxonomic identifier | 9606 [NCBI] | ||||||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo |
Protein attributes
| Sequence length | 731 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at transcript level |
General annotation (Comments)
| Function | May function as a GTPase-activating protein and may play important roles during T-cell activation. Ref.1 |
| Sequence similarities | Contains 1 Rho-GAP domain. |
Ontologies
| Keywords | |
|---|---|
| Coding sequence diversity | Alternative splicing Polymorphism |
| Molecular function | Guanine-nucleotide releasing factor |
| Technical term | Complete proteome Reference proteome |
| Gene Ontology (GO) | |
| Biological process | regulation of small GTPase mediated signal transduction Traceable author statement. Source: Reactome small GTPase mediated signal transductionTraceable author statement. Source: Reactome |
| Cellular component | cytosol Traceable author statement. Source: Reactome |
| Molecular function | guanyl-nucleotide exchange factor activity Inferred from electronic annotation. Source: UniProtKB-KW |
| Complete GO annotation... | |
Alternative products
| This entry describes 4 isoforms produced by alternative splicing. [Align] [Select] | ||||||
| Isoform 1 (identifier: Q8N103-1) This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry. | ||||||
| Isoform 2 (identifier: Q8N103-2) The sequence of this isoform differs from the canonical sequence as follows: 1-178: Missing. | ||||||
| Isoform 3 (identifier: Q8N103-3) Also known as: FKSG15; The sequence of this isoform differs from the canonical sequence as follows: 1-209: Missing. 210-261: KHLVYVLHLI...FEAQKDLNNK → MAATAAAVVA...LALEEQEKVE | ||||||
| Note: No experimental confirmation available. Dubious isoform. The N-terminus appears to be derived from exons of the FGFR1OP locus which is located on the opposing strand of chromosome 6 at a distance of several Mb. | ||||||
| Isoform 4 (identifier: Q8N103-4) The sequence of this isoform differs from the canonical sequence as follows: 263-266: KTLV → CSAY 267-731: Missing. | ||||||
| Note: No experimental confirmation available. |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 731 | 731 | T-cell activation Rho GTPase-activating protein | PRO_0000056719 | |||||
Regions | |||||||||
| Domain | 88 – 277 | 190 | Rho-GAP | ||||||
Natural variations | |||||||||
| Alternative sequence | 1 – 209 | 209 | Missing in isoform 3. | VSP_015868 | |||||
| Alternative sequence | 1 – 178 | 178 | Missing in isoform 2. | VSP_015869 | |||||
| Alternative sequence | 210 – 261 | 52 | KHLVY…DLNNK → MAATAAAVVAEEDTELRDLL VQTLENSGVLNRIKAELRAA VFLALEEQEKVE in isoform 3. | VSP_015870 | |||||
| Alternative sequence | 263 – 266 | 4 | KTLV → CSAY in isoform 4. | VSP_015871 | |||||
| Alternative sequence | 267 – 731 | 465 | Missing in isoform 4. | VSP_015872 | |||||
| Natural variant | 346 | 1 | G → D. Corresponds to variant rs35263580 [ dbSNP | Ensembl ]. | VAR_049146 | |||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "T lymphocyte activation gene identification by coregulated expression on DNA microarrays." Mao M., Biery M.C., Kobayashi S.V., Ward T., Schimmack G., Burchard J., Schelter J.M., Dai H., He Y.D., Linsley P.S. Genomics 83:989-999(2004) [PubMed: 15177553] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORMS 1 AND 2), FUNCTION. |
| [2] | "FKSG15, a novel 57 kDa protein, shares the N-terminal region with FOP." Wang Y.-G., Gong L. Submitted (OCT-2000) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 3). |
| [3] | "Complete sequencing and characterization of 21,243 full-length human cDNAs." Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S. Sugano S.Nat. Genet. 36:40-45(2004) [PubMed: 14702039] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1). Tissue: Spleen. |
| [4] | "The DNA sequence and analysis of human chromosome 6." Mungall A.J., Palmer S.A., Sims S.K., Edwards C.A., Ashurst J.L., Wilming L., Jones M.C., Horton R., Hunt S.E., Scott C.E., Gilbert J.G.R., Clamp M.E., Bethel G., Milne S., Ainscough R., Almeida J.P., Ambrose K.D., Andrews T.D. Beck S.Nature 425:805-811(2003) [PubMed: 14574404] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [5] | "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed: 15489334] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORMS 1 AND 4). Tissue: Lung. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | AF385429 mRNA. Translation: AAM43830.1. AF385430 mRNA. Translation: AAM43831.1. AF314817 mRNA. Translation: AAL16675.1. AK097090 mRNA. Translation: BAC04947.1. AL035530 Genomic DNA. Translation: CAI19231.1. AL035530 Genomic DNA. Translation: CAI19232.1. AL035530 Genomic DNA. Translation: CAI19233.1. BC015859 mRNA. Translation: AAH15859.1. BC111731 mRNA. Translation: AAI11732.1. |
| IPI | IPI00160359. IPI00166033. IPI00182659. IPI00651776. |
| RefSeq | NP_473455.2. NM_054114.3. NP_620165.1. NM_138810.2. NP_687034.1. NM_152133.1. |
| UniGene | Hs.529984. |
3D structure databases | |
| ProteinModelPortal | Q8N103. |
| SMR | Q8N103. Positions 83-277. |
| ModBase | Search... |
Protein-protein interaction databases | |
| STRING | Q8N103. |
PTM databases | |
| PhosphoSite | Q8N103. |
Polymorphism databases | |
| DMDM | 74750874. |
Proteomic databases | |
| PRIDE | Q8N103. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| Ensembl | ENST00000367066; ENSP00000356033; ENSG00000164691. |
| GeneID | 117289. |
| KEGG | hsa:117289. |
| UCSC | uc003qrz.1. human. uc003qsa.1. human. uc003qsb.1. human. |
Organism-specific databases | |
| CTD | 117289. |
| GeneCards | GC06M159457. |
| H-InvDB | HIX0006337. |
| HGNC | HGNC:15669. TAGAP. |
| HPA | HPA031000. |
| MIM | 609667. gene. |
| neXtProt | NX_Q8N103. |
| PharmGKB | PA38016. |
| GenAtlas | Search... |
Phylogenomic databases | |
| eggNOG | prNOG12529. |
| HOGENOM | HBG282610. |
| HOVERGEN | HBG071607. |
| InParanoid | Q8N103. |
| OMA | RRYSEPS. |
| OrthoDB | EOG4P8FHZ. |
| PhylomeDB | Q8N103. |
Enzyme and pathway databases | |
| Reactome | REACT_111102. Signal Transduction. |
Gene expression databases | |
| ArrayExpress | Q8N103. |
| Bgee | Q8N103. |
| CleanEx | HS_TAGAP. |
| Genevestigator | Q8N103. |
| GermOnline | ENSG00000164691. Homo sapiens. |
Family and domain databases | |
| InterPro | IPR008936. Rho_GTPase_activation_prot. IPR000198. RhoGAP_dom. [Graphical view] |
| Gene3D | G3DSA:1.10.555.10. RhoGAP. 1 hit. |
| Pfam | PF00620. RhoGAP. 1 hit. [Graphical view] |
| SMART | SM00324. RhoGAP. 1 hit. [Graphical view] |
| SUPFAM | SSF48350. Rho_GAP. 1 hit. |
| PROSITE | PS50238. RHOGAP. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Other | |
| NextBio | 80198. |
| SOURCE | Search... |
Entry information
| Entry name | TAGAP_HUMAN | ||||||||
| Accession | Primary (citable) accession number: Q8N103 Secondary accession number(s): Q2NKM8 Q96QA2 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Chordata Protein Annotation Program | ||||||||
| Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. | ||||||||
Relevant documents
| Human chromosome 6 Human chromosome 6: entries, gene names and cross-references to MIM |
| Human entries with polymorphisms or disease mutations List of human entries with polymorphisms or disease mutations |
| Human polymorphisms and disease mutations Index of human polymorphisms and disease mutations |
| MIM cross-references Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot |
| SIMILARITY comments Index of protein domains and families |

Clusters with