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Protein

Endoglucanase 3

Gene

GLU8

Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at transcript leveli

Functioni

Catalytic activityi

Endohydrolysis of (1->4)-beta-D-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans.

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei416 – 4161PROSITE-ProRule annotation
Active sitei467 – 4671PROSITE-ProRule annotation
Active sitei476 – 4761PROSITE-ProRule annotation

GO - Molecular functioni

  1. cellulase activity Source: UniProtKB-EC

GO - Biological processi

  1. cellulose catabolic process Source: UniProtKB-KW
  2. cell wall organization Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

Glycosidase, Hydrolase

Keywords - Biological processi

Carbohydrate metabolism, Cell wall biogenesis/degradation, Cellulose degradation, Polysaccharide degradation

Protein family/group databases

CAZyiGH9. Glycoside Hydrolase Family 9.

Names & Taxonomyi

Protein namesi
Recommended name:
Endoglucanase 3 (EC:3.2.1.4)
Alternative name(s):
Endo-1,4-beta glucanase 3
OsGLU8
Gene namesi
Name:GLU8
Ordered Locus Names:Os01g0312800, LOC_Os01g21070
ORF Names:B1011A07.26
OrganismiOryza sativa subsp. japonica (Rice)
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza
ProteomesiUP000000763 Componenti: Chromosome 1

Organism-specific databases

GrameneiQ8LQ92.

Subcellular locationi

Secreted By similarity

GO - Cellular componenti

  1. extracellular region Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

Secreted

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 1919Sequence AnalysisAdd
BLAST
Chaini20 – 499480Endoglucanase 3PRO_0000249280Add
BLAST

Expressioni

Tissue specificityi

Expressed in flowers.1 Publication

Gene expression databases

ExpressionAtlasiQ8LQ92. baseline.

Structurei

3D structure databases

ProteinModelPortaliQ8LQ92.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiNOG05134.
InParanoidiQ8LQ92.
OMAiEYKGHAD.

Family and domain databases

Gene3Di1.50.10.10. 1 hit.
InterProiIPR008928. 6-hairpin_glycosidase-like.
IPR012341. 6hp_glycosidase.
IPR001701. Glyco_hydro_9.
IPR018221. Glyco_hydro_9_AS.
[Graphical view]
PfamiPF00759. Glyco_hydro_9. 1 hit.
[Graphical view]
SUPFAMiSSF48208. SSF48208. 1 hit.
PROSITEiPS00592. GLYCOSYL_HYDROL_F9_1. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q8LQ92-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MALLRCLFLL AVLLPHRNAA VVAAASPHHG PAPHDYRDAL TKSILFFEGQ
60 70 80 90 100
RSGKLPPSQR VSWRGDSGLS DGSSIKVDLV GGYYDAGDNM KFGFPLAFSM
110 120 130 140 150
TMLAWSVVEF GGLMKGELQH ARDAVRWGSD YLLKATAHPD TVYVQVGDAN
160 170 180 190 200
RDHACWERPE DMDTPRTVYK VDPSTPGTDV AAETAAALAA ASLVFRKSDP
210 220 230 240 250
AYASRLVARA KRVFEFADKH RGTYSTRLSP YVCPYYCSYS GYQDELLWGA
260 270 280 290 300
AWLHRATKNP TYLSYIQMNG QVLGADEQDN TFGWDNKHAG ARILIAKAFL
310 320 330 340 350
VQKVAALHEY KGHADSFICS MVPGTPTDQT QYTRGGLLFK LSDSNMQYVT
360 370 380 390 400
SSSFLLLTYA KYLAFSKTTV SCGGAAVTPA RLRAIARQQV DYLLGSNPMG
410 420 430 440 450
MSYMVGYGAK YPRRIHHRAS SLPSVAAHPA RIGCSQGFTA LYSGVANPNV
460 470 480 490
LVGAVVGGPN LQDQFPDQRS DHEHSEPATY INAPLVGALA YLAHSYGQL
Length:499
Mass (Da):54,427
Last modified:September 30, 2002 - v1
Checksum:i73B3C65F02005791
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti94 – 941F → S in AK106887 (PubMed:12869764).Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP003722 Genomic DNA. Translation: BAB92772.1.
AP008207 Genomic DNA. Translation: BAF04781.2.
AK106887 mRNA. No translation available.
RefSeqiNP_001042867.2. NM_001049402.1.
UniGeneiOs.28032.

Genome annotation databases

EnsemblPlantsiOS01T0312800-01; OS01T0312800-01; OS01G0312800.
GeneIDi4327286.
KEGGiosa:4327286.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP003722 Genomic DNA. Translation: BAB92772.1.
AP008207 Genomic DNA. Translation: BAF04781.2.
AK106887 mRNA. No translation available.
RefSeqiNP_001042867.2. NM_001049402.1.
UniGeneiOs.28032.

3D structure databases

ProteinModelPortaliQ8LQ92.
ModBaseiSearch...
MobiDBiSearch...

Protein family/group databases

CAZyiGH9. Glycoside Hydrolase Family 9.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiOS01T0312800-01; OS01T0312800-01; OS01G0312800.
GeneIDi4327286.
KEGGiosa:4327286.

Organism-specific databases

GrameneiQ8LQ92.

Phylogenomic databases

eggNOGiNOG05134.
InParanoidiQ8LQ92.
OMAiEYKGHAD.

Gene expression databases

ExpressionAtlasiQ8LQ92. baseline.

Family and domain databases

Gene3Di1.50.10.10. 1 hit.
InterProiIPR008928. 6-hairpin_glycosidase-like.
IPR012341. 6hp_glycosidase.
IPR001701. Glyco_hydro_9.
IPR018221. Glyco_hydro_9_AS.
[Graphical view]
PfamiPF00759. Glyco_hydro_9. 1 hit.
[Graphical view]
SUPFAMiSSF48208. SSF48208. 1 hit.
PROSITEiPS00592. GLYCOSYL_HYDROL_F9_1. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "The genome sequence and structure of rice chromosome 1."
    Sasaki T., Matsumoto T., Yamamoto K., Sakata K., Baba T., Katayose Y., Wu J., Niimura Y., Cheng Z., Nagamura Y., Antonio B.A., Kanamori H., Hosokawa S., Masukawa M., Arikawa K., Chiden Y., Hayashi M., Okamoto M.
    , Ando T., Aoki H., Arita K., Hamada M., Harada C., Hijishita S., Honda M., Ichikawa Y., Idonuma A., Iijima M., Ikeda M., Ikeno M., Ito S., Ito T., Ito Y., Ito Y., Iwabuchi A., Kamiya K., Karasawa W., Katagiri S., Kikuta A., Kobayashi N., Kono I., Machita K., Maehara T., Mizuno H., Mizubayashi T., Mukai Y., Nagasaki H., Nakashima M., Nakama Y., Nakamichi Y., Nakamura M., Namiki N., Negishi M., Ohta I., Ono N., Saji S., Sakai K., Shibata M., Shimokawa T., Shomura A., Song J., Takazaki Y., Terasawa K., Tsuji K., Waki K., Yamagata H., Yamane H., Yoshiki S., Yoshihara R., Yukawa K., Zhong H., Iwama H., Endo T., Ito H., Hahn J.H., Kim H.-I., Eun M.-Y., Yano M., Jiang J., Gojobori T.
    Nature 420:312-316(2001) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Nipponbare.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Nipponbare.
  3. "The rice annotation project database (RAP-DB): 2008 update."
    The rice annotation project (RAP)
    Nucleic Acids Res. 36:D1028-D1033(2007) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENOME REANNOTATION.
    Strain: cv. Nipponbare.
  4. "Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice."
    The rice full-length cDNA consortium
    Science 301:376-379(2002) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: cv. Nipponbare.
  5. "OsGLU1, a putative membrane-bound endo-1,4-beta-D-glucanase from rice, affects plant internode elongation."
    Zhou H.-L., He S.-J., Cao Y.-R., Chen T., Du B.-X., Chu C.-C., Zhang J.-S., Chen S.-Y.
    Plant Mol. Biol. 60:137-151(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: TISSUE SPECIFICITY.

Entry informationi

Entry nameiGUN3_ORYSJ
AccessioniPrimary (citable) accession number: Q8LQ92
Secondary accession number(s): Q0JN97
Entry historyi
Integrated into UniProtKB/Swiss-Prot: September 4, 2006
Last sequence update: September 30, 2002
Last modified: January 6, 2015
This is version 79 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Glycosyl hydrolases
    Classification of glycosyl hydrolase families and list of entries
  2. Oryza sativa (rice)
    Index of Oryza sativa entries and their corresponding gene designations
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.