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Q8LQ36

- ATX3_ORYSJ

UniProt

Q8LQ36 - ATX3_ORYSJ

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Protein

Putative ataxin-3 homolog

Gene

Os01g0851400

Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed - Annotation score: 3 out of 5- Protein inferred from homologyi

Functioni

Interacts with key regulators of transcription and represses transcription. Acts as a histone-binding protein that regulates transcription. Acts as a deubiquitinating enzyme By similarity.By similarity

Catalytic activityi

Thiol-dependent hydrolysis of ester, thioester, amide, peptide and isopeptide bonds formed by the C-terminal Gly of ubiquitin (a 76-residue protein attached to proteins as an intracellular targeting signal).

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei23 – 231NucleophilePROSITE-ProRule annotation
Active sitei132 – 1321Proton acceptorPROSITE-ProRule annotation
Active sitei147 – 1471PROSITE-ProRule annotation

GO - Molecular functioni

  1. cysteine-type peptidase activity Source: UniProtKB-KW
  2. omega peptidase activity Source: EnsemblPlants/Gramene

GO - Biological processi

  1. D-xylose metabolic process Source: EnsemblPlants/Gramene
  2. regulation of transcription, DNA-templated Source: UniProtKB-KW
  3. response to chitin Source: EnsemblPlants/Gramene
  4. transcription, DNA-templated Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

Hydrolase, Protease, Thiol protease

Keywords - Biological processi

Transcription, Transcription regulation, Ubl conjugation pathway

Protein family/group databases

MEROPSiC86.A01.

Names & Taxonomyi

Protein namesi
Recommended name:
Putative ataxin-3 homolog (EC:3.4.19.12)
Gene namesi
Ordered Locus Names:Os01g0851400, LOC_Os01g63250
ORF Names:P0529H11.31
OrganismiOryza sativa subsp. japonica (Rice)
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza
ProteomesiUP000000763: Chromosome 1

Organism-specific databases

GrameneiQ8LQ36.

Subcellular locationi

Nucleus By similarity

GO - Cellular componenti

  1. nucleus Source: UniProtKB-KW
Complete GO annotation...

Keywords - Cellular componenti

Nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 336336Putative ataxin-3 homologPRO_0000053837Add
BLAST

Expressioni

Gene expression databases

ExpressionAtlasiQ8LQ36. baseline.

Structurei

3D structure databases

ProteinModelPortaliQ8LQ36.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini10 – 193184JosephinPROSITE-ProRule annotationAdd
BLAST
Repeati244 – 26320UIMAdd
BLAST

Sequence similaritiesi

Contains 1 Josephin domain.PROSITE-ProRule annotation

Phylogenomic databases

eggNOGiNOG327234.
InParanoidiQ8LQ36.
KOiK11863.
OMAiLMDTGGP.

Family and domain databases

InterProiIPR006155. Josephin.
[Graphical view]
PfamiPF02099. Josephin. 1 hit.
[Graphical view]
PRINTSiPR01233. JOSEPHIN.
PROSITEiPS50957. JOSEPHIN. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q8LQ36-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MEEAAAASNG GLLYHEVQEG KLCAVHCVNT TLQGPFFSEF DLSALAVDLD
60 70 80 90 100
QRERQVMSEG AAGAATTAAG DFLAEGEGSH NVSLGGDFSI QVLQKALEVW
110 120 130 140 150
DLQVIPLDSP DVGSCLFDPE LETAFICHLQ DHWFCIRKVN GEWYNFNSLY
160 170 180 190 200
PAPEHLSKFY LSAFIDTLKG SGWSIFAVRG NFPKECPMAT EGSNGFGQWL
210 220 230 240 250
TPDDARRITS SCNQVQTPTQ QAGVSLVADQ SEEMSEMDMI AAQQEEADLN
260 270 280 290 300
AAIAASLMDT GGPFANYAAH EESRSQDAFA IESTSGEMSK DGNLEEQGAN
310 320 330
KSETSEPNSD NIESASGSNP KQNTTSLEGK ESIKED
Length:336
Mass (Da):36,205
Last modified:October 1, 2002 - v1
Checksum:i84020FBEA78E8715
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AP004072 Genomic DNA. Translation: BAB92851.1.
RefSeqiNP_001044821.2. NM_001051356.2.
UniGeneiOs.7799.

Genome annotation databases

EnsemblPlantsiOS01T0851400-01; OS01T0851400-01; OS01G0851400.
GeneIDi4324808.
KEGGiosa:4324808.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AP004072 Genomic DNA. Translation: BAB92851.1 .
RefSeqi NP_001044821.2. NM_001051356.2.
UniGenei Os.7799.

3D structure databases

ProteinModelPortali Q8LQ36.
ModBasei Search...
MobiDBi Search...

Protein family/group databases

MEROPSi C86.A01.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblPlantsi OS01T0851400-01 ; OS01T0851400-01 ; OS01G0851400 .
GeneIDi 4324808.
KEGGi osa:4324808.

Organism-specific databases

Gramenei Q8LQ36.

Phylogenomic databases

eggNOGi NOG327234.
InParanoidi Q8LQ36.
KOi K11863.
OMAi LMDTGGP.

Gene expression databases

ExpressionAtlasi Q8LQ36. baseline.

Family and domain databases

InterProi IPR006155. Josephin.
[Graphical view ]
Pfami PF02099. Josephin. 1 hit.
[Graphical view ]
PRINTSi PR01233. JOSEPHIN.
PROSITEi PS50957. JOSEPHIN. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "The genome sequence and structure of rice chromosome 1."
    Sasaki T., Matsumoto T., Yamamoto K., Sakata K., Baba T., Katayose Y., Wu J., Niimura Y., Cheng Z., Nagamura Y., Antonio B.A., Kanamori H., Hosokawa S., Masukawa M., Arikawa K., Chiden Y., Hayashi M., Okamoto M.
    , Ando T., Aoki H., Arita K., Hamada M., Harada C., Hijishita S., Honda M., Ichikawa Y., Idonuma A., Iijima M., Ikeda M., Ikeno M., Ito S., Ito T., Ito Y., Ito Y., Iwabuchi A., Kamiya K., Karasawa W., Katagiri S., Kikuta A., Kobayashi N., Kono I., Machita K., Maehara T., Mizuno H., Mizubayashi T., Mukai Y., Nagasaki H., Nakashima M., Nakama Y., Nakamichi Y., Nakamura M., Namiki N., Negishi M., Ohta I., Ono N., Saji S., Sakai K., Shibata M., Shimokawa T., Shomura A., Song J., Takazaki Y., Terasawa K., Tsuji K., Waki K., Yamagata H., Yamane H., Yoshiki S., Yoshihara R., Yukawa K., Zhong H., Iwama H., Endo T., Ito H., Hahn J.H., Kim H.-I., Eun M.-Y., Yano M., Jiang J., Gojobori T.
    Nature 420:312-316(2002) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Nipponbare.

Entry informationi

Entry nameiATX3_ORYSJ
AccessioniPrimary (citable) accession number: Q8LQ36
Entry historyi
Integrated into UniProtKB/Swiss-Prot: January 24, 2006
Last sequence update: October 1, 2002
Last modified: October 29, 2014
This is version 59 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Oryza sativa (rice)
    Index of Oryza sativa entries and their corresponding gene designations
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3