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Protein

40S ribosomal protein S26-2

Gene

RPS26B

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  • mRNA binding Source: GO_Central
  • structural constituent of ribosome Source: CAFA

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Enzyme and pathway databases

ReactomeiR-ATH-156827 L13a-mediated translational silencing of Ceruloplasmin expression
R-ATH-1799339 SRP-dependent cotranslational protein targeting to membrane
R-ATH-72689 Formation of a pool of free 40S subunits
R-ATH-72695 Formation of the ternary complex, and subsequently, the 43S complex
R-ATH-72702 Ribosomal scanning and start codon recognition
R-ATH-72706 GTP hydrolysis and joining of the 60S ribosomal subunit
R-ATH-975956 Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)
R-ATH-975957 Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)

Names & Taxonomyi

Protein namesi
Recommended name:
40S ribosomal protein S26-2
Gene namesi
Name:RPS26B
Ordered Locus Names:At2g40510
ORF Names:T2P4.14
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi

Organism-specific databases

AraportiAT2G40510
TAIRilocus:2061883 AT2G40510

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002505361 – 13340S ribosomal protein S26-2Add BLAST133

Proteomic databases

PaxDbiQ8LPJ7
PRIDEiQ8LPJ7

PTM databases

iPTMnetiQ8LPJ7

Expressioni

Gene expression databases

ExpressionAtlasiQ8LPJ7 baseline and differential
GenevisibleiQ8LPJ7 AT

Interactioni

Protein-protein interaction databases

BioGridi3984, 4 interactors
IntActiQ8LPJ7, 2 interactors
STRINGi3702.AT2G40510.1

Structurei

3D structure databases

ProteinModelPortaliQ8LPJ7
SMRiQ8LPJ7
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiKOG1768 Eukaryota
COG4830 LUCA
HOGENOMiHOG000108824
InParanoidiQ8LPJ7
KOiK02976
OMAiDIKENCI
OrthoDBiEOG09360YU3
PhylomeDBiQ8LPJ7

Family and domain databases

Gene3Di3.30.1740.20, 1 hit
InterProiView protein in InterPro
IPR000892 Ribosomal_S26e
IPR038551 Ribosomal_S26e_sf
PANTHERiPTHR12538 PTHR12538, 1 hit
PfamiView protein in Pfam
PF01283 Ribosomal_S26e, 1 hit
PROSITEiView protein in PROSITE
PS00733 RIBOSOMAL_S26E, 1 hit

Sequencei

Sequence statusi: Complete.

Q8LPJ7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTFKRRNGGR NKHNRGHVNP IRCSNCGKCC PKDKAIKRFI VRNIVEQAAI
60 70 80 90 100
RDVQEASVYE GYTLPKLYAK TQYCVSCAIH SHVVRVRSRT NRRVRTPPPR
110 120 130
FARRKEDTPK PGQPGQAPRP AGPGAAAAAA PRV
Length:133
Mass (Da):14,841
Last modified:October 3, 2006 - v2
Checksum:i17062A9855B52DB5
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sequence conflicti64L → F in AAM20524 (PubMed:14593172).Curated1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC002336 Genomic DNA Translation: AAB87594.1
CP002685 Genomic DNA Translation: AEC09839.1
AY099673 mRNA Translation: AAM20524.1
BT020291 mRNA Translation: AAV84512.1
BT026422 mRNA Translation: ABH04529.1
AY086823 mRNA Translation: AAM63871.1
PIRiD84830
RefSeqiNP_181583.1, NM_129613.5
UniGeneiAt.23445

Genome annotation databases

EnsemblPlantsiAT2G40510.1; AT2G40510.1; AT2G40510
GeneIDi818646
GrameneiAT2G40510.1; AT2G40510.1; AT2G40510
KEGGiath:AT2G40510

Similar proteinsi

Entry informationi

Entry nameiRS262_ARATH
AccessioniPrimary (citable) accession number: Q8LPJ7
Secondary accession number(s): O22884
Entry historyiIntegrated into UniProtKB/Swiss-Prot: October 3, 2006
Last sequence update: October 3, 2006
Last modified: April 25, 2018
This is version 95 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

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