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Protein

ABC transporter E family member 2

Gene

ABCE2

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at transcript leveli

Functioni

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Nucleotide bindingi110 – 1178ATPPROSITE-ProRule annotation
Nucleotide bindingi381 – 3888ATPPROSITE-ProRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Transport

Keywords - Ligandi

4Fe-4S, ATP-binding, Iron, Iron-sulfur, Metal-binding, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
ABC transporter E family member 2
Short name:
ABC transporter ABCE.2
Short name:
AtABCE2
Alternative name(s):
RNase L inhibitor-like protein 2
Short name:
AtRLI2
Short name:
AthaRLI2
Gene namesi
Name:ABCE2
Synonyms:RLI2
Ordered Locus Names:At4g19210
ORF Names:T18B16.180
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 4

Organism-specific databases

TAIRiAT4G19210.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 605605ABC transporter E family member 2PRO_0000379138Add
BLAST

Proteomic databases

PaxDbiQ8LPJ4.
PRIDEiQ8LPJ4.

PTM databases

iPTMnetiQ8LPJ4.

Expressioni

Tissue specificityi

Expressed in roots, stems, leaves, flowers and siliques.1 Publication

Inductioni

In plants undergoing RNA interference.1 Publication

Gene expression databases

GenevisibleiQ8LPJ4. AT.

Interactioni

Protein-protein interaction databases

BioGridi12954. 8 interactions.
IntActiQ8LPJ4. 8 interactions.
STRINGi3702.AT4G19210.1.

Structurei

3D structure databases

ProteinModelPortaliQ8LPJ4.
SMRiQ8LPJ4. Positions 1-605.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini46 – 75304Fe-4S ferredoxin-typePROSITE-ProRule annotationAdd
BLAST
Domaini70 – 315246ABC transporter 1PROSITE-ProRule annotationAdd
BLAST
Domaini344 – 568225ABC transporter 2PROSITE-ProRule annotationAdd
BLAST

Sequence similaritiesi

Contains 1 4Fe-4S ferredoxin-type domain.PROSITE-ProRule annotation
Contains 2 ABC transporter domains.PROSITE-ProRule annotation

Keywords - Domaini

Repeat

Phylogenomic databases

eggNOGiKOG0063. Eukaryota.
COG1245. LUCA.
HOGENOMiHOG000222803.
InParanoidiQ8LPJ4.
KOiK06174.
OMAiAYKPQYI.
OrthoDBiEOG093604PR.
PhylomeDBiQ8LPJ4.

Family and domain databases

Gene3Di3.40.50.300. 2 hits.
InterProiIPR017896. 4Fe4S_Fe-S-bd.
IPR017900. 4Fe4S_Fe_S_CS.
IPR003593. AAA+_ATPase.
IPR003439. ABC_transporter-like.
IPR017871. ABC_transporter_CS.
IPR013283. ABCE.
IPR027417. P-loop_NTPase.
IPR007209. RNaseL-inhib_metal-bd_dom.
[Graphical view]
PANTHERiPTHR19248. PTHR19248. 1 hit.
PfamiPF00005. ABC_tran. 2 hits.
PF00037. Fer4. 1 hit.
PF04068. RLI. 1 hit.
[Graphical view]
PRINTSiPR01868. ABCEFAMILY.
SMARTiSM00382. AAA. 2 hits.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 2 hits.
PROSITEiPS00198. 4FE4S_FER_1. 1 hit.
PS51379. 4FE4S_FER_2. 1 hit.
PS00211. ABC_TRANSPORTER_1. 1 hit.
PS50893. ABC_TRANSPORTER_2. 2 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q8LPJ4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MADRLTRIAI VSSDRCKPKK CRQECKKSCP VVKTGKLCIE VTVGSKLAFI
60 70 80 90 100
SEELCIGCGI CVKKCPFEAI QIINLPRDLE KDTTHRYGAN TFKLHRLPVP
110 120 130 140 150
RPGQVLGLVG TNGIGKSTAL KILAGKLKPN LGRFTSPPDW QEILTHFRGS
160 170 180 190 200
ELQNYFTRIL EDNLKAIIKP QYVDHIPRAV KGNVGEVLDQ KDERDKKAEL
210 220 230 240 250
CADLELNQVI DRDVENLSGG ELQRFAIAVV AIQNAEIYMF DEPSSYLDVK
260 270 280 290 300
QRLKAAQVVR SLLRPNSYVI VVEHDLSVLD YLSDFICCLY GKPGAYGVVT
310 320 330 340 350
LPFSVREGIN IFLAGFVPTE NLRFRDESLT FKVAETPQES AEEIQSYARY
360 370 380 390 400
KYPTMTKTQG NFRLRVSEGE FTDSQIIVML GENGTGKTTF IRMLAGLLKP
410 420 430 440 450
DDTEGPDREI PEFNVSYKPQ KISPKFQNSV RHLLHQKIRD SYMHPQFMSD
460 470 480 490 500
VMKPLQIEQL MDQEVVNLSG GELQRVALTL CLGKPADIYL IDEPSAYLDS
510 520 530 540 550
EQRIVASKVI KRFILHAKKT AFVVEHDFIM ATYLADRVIV YEGQPSIDCT
560 570 580 590 600
ANCPQSLLSG MNLFLSHLNI TFRRDPTNFR PRINKLESTK DREQKSAGSY

YYLDD
Length:605
Mass (Da):68,390
Last modified:October 1, 2002 - v1
Checksum:i8CE4ADCB3023B4C7
GO

Sequence cautioni

The sequence CAA16710 differs from that shown. Reason: Erroneous gene model prediction. Curated
The sequence CAB78923 differs from that shown. Reason: Erroneous gene model prediction. Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL021687 Genomic DNA. Translation: CAA16710.1. Sequence problems.
AL161550 Genomic DNA. Translation: CAB78923.1. Sequence problems.
CP002687 Genomic DNA. Translation: AEE84160.1.
AY099697 mRNA. Translation: AAM20548.1.
BT000298 mRNA. Translation: AAN15617.1.
AK221885 mRNA. Translation: BAD94217.1.
AK226939 mRNA. Translation: BAE99009.1.
PIRiT04442.
RefSeqiNP_193656.2. NM_118041.4.
UniGeneiAt.24747.
At.43389.

Genome annotation databases

EnsemblPlantsiAT4G19210.1; AT4G19210.1; AT4G19210.
GeneIDi827661.
GrameneiAT4G19210.1; AT4G19210.1; AT4G19210.
KEGGiath:AT4G19210.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL021687 Genomic DNA. Translation: CAA16710.1. Sequence problems.
AL161550 Genomic DNA. Translation: CAB78923.1. Sequence problems.
CP002687 Genomic DNA. Translation: AEE84160.1.
AY099697 mRNA. Translation: AAM20548.1.
BT000298 mRNA. Translation: AAN15617.1.
AK221885 mRNA. Translation: BAD94217.1.
AK226939 mRNA. Translation: BAE99009.1.
PIRiT04442.
RefSeqiNP_193656.2. NM_118041.4.
UniGeneiAt.24747.
At.43389.

3D structure databases

ProteinModelPortaliQ8LPJ4.
SMRiQ8LPJ4. Positions 1-605.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi12954. 8 interactions.
IntActiQ8LPJ4. 8 interactions.
STRINGi3702.AT4G19210.1.

PTM databases

iPTMnetiQ8LPJ4.

Proteomic databases

PaxDbiQ8LPJ4.
PRIDEiQ8LPJ4.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiAT4G19210.1; AT4G19210.1; AT4G19210.
GeneIDi827661.
GrameneiAT4G19210.1; AT4G19210.1; AT4G19210.
KEGGiath:AT4G19210.

Organism-specific databases

TAIRiAT4G19210.

Phylogenomic databases

eggNOGiKOG0063. Eukaryota.
COG1245. LUCA.
HOGENOMiHOG000222803.
InParanoidiQ8LPJ4.
KOiK06174.
OMAiAYKPQYI.
OrthoDBiEOG093604PR.
PhylomeDBiQ8LPJ4.

Miscellaneous databases

PROiQ8LPJ4.

Gene expression databases

GenevisibleiQ8LPJ4. AT.

Family and domain databases

Gene3Di3.40.50.300. 2 hits.
InterProiIPR017896. 4Fe4S_Fe-S-bd.
IPR017900. 4Fe4S_Fe_S_CS.
IPR003593. AAA+_ATPase.
IPR003439. ABC_transporter-like.
IPR017871. ABC_transporter_CS.
IPR013283. ABCE.
IPR027417. P-loop_NTPase.
IPR007209. RNaseL-inhib_metal-bd_dom.
[Graphical view]
PANTHERiPTHR19248. PTHR19248. 1 hit.
PfamiPF00005. ABC_tran. 2 hits.
PF00037. Fer4. 1 hit.
PF04068. RLI. 1 hit.
[Graphical view]
PRINTSiPR01868. ABCEFAMILY.
SMARTiSM00382. AAA. 2 hits.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 2 hits.
PROSITEiPS00198. 4FE4S_FER_1. 1 hit.
PS51379. 4FE4S_FER_2. 1 hit.
PS00211. ABC_TRANSPORTER_1. 1 hit.
PS50893. ABC_TRANSPORTER_2. 2 hits.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiAB2E_ARATH
AccessioniPrimary (citable) accession number: Q8LPJ4
Secondary accession number(s): O49679, Q56WZ4
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 7, 2009
Last sequence update: October 1, 2002
Last modified: September 7, 2016
This is version 99 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.