Putative blue light receptor - Chlamydomonas reinhardtii

Preferred order of sections

Names and origin

Protein names

Submitted name:
Putative blue light receptor EMBL CAC94940.1

Gene names

Name:

phot EMBL CAC94940.1

Organism

Chlamydomonas reinhardtii (Chlamydomonas smithii) EMBL CAC94940.1

Taxonomic identifier

3055 [NCBI]

Taxonomic lineage

Eukaryota › Viridiplantae › Chlorophyta › Chlorophyceae › Chlamydomonadales › Chlamydomonadaceae › Chlamydomonas

Protein attributes

Sequence length	750 AA.
Sequence status	Complete.
Protein existence	Evidence at protein level

General annotation (Comments)

Catalytic activity

ATP + a protein = ADP + a phosphoprotein. SAAS SAAS000961

Ontologies

Keywords
Ligand	ATP-binding SAAS SAAS000961 FMN PDB 1N9L PDB 1N9N PDB 1N9O Flavoprotein PDB 1N9L PDB 1N9N PDB 1N9O Nucleotide-binding
Molecular function	Kinase Receptor EMBL CAC94940.1 Serine/threonine-protein kinase SAAS SAAS000961 Transferase
Technical term	3D-structure PDB 1N9L PDB 1N9N PDB 1N9O
Gene Ontology (GO)
Biological process	regulation of transcription, DNA-dependent Inferred from electronic annotation. Source: InterPro
Molecular function	ATP binding Inferred from electronic annotation. Source: UniProtKB-KW protein serine/threonine kinase activity Inferred from electronic annotation. Source: UniProtKB-KW receptor activity Inferred from electronic annotation. Source: UniProtKB-KW two-component sensor activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

Feature key

Position(s)

Length

Description

Graphical view

Feature identifier

Regions

Nucleotide binding

56 – 61

6

FMN PDB 1N9L PDB 1N9N PDB 1N9O

Sites

Binding site

74

1

FMN PDB 1N9L PDB 1N9N PDB 1N9O

Binding site

89

1

FMN PDB 1N9L PDB 1N9N PDB 1N9O

Binding site

99

1

FMN PDB 1N9L PDB 1N9N

Binding site

120

1

FMN PDB 1N9L PDB 1N9O

Sequences

Sequence

Length

Mass (Da)

Tools

Q8LPE0 [UniParc].

Last modified October 1, 2002. Version 1.
Checksum: E5B649BC8732C2A1
Show »

FASTA

750

81,480

        10         20         30         40         50         60 
MAGVPAPASQ LTKVLAGLRH TFVVADATLP DCPLVYASEG FYAMTGYGPD EVLGHNCRFL 

        70         80         90        100        110        120 
QGEGTDPKEV QKIRDAIKKG EACSVRLLNY RKDGTPFWNL LTVTPIKTPD GRVSKFVGVQ 

       130        140        150        160        170        180 
VDVTSKTEGK ALADNSGVPL LVKYDHRLRD NVARTIVDDV TIAVEKAEGV EPGQASAVAA 

       190        200        210        220        230        240 
AAPLGAKGPR GTAPKSFPRV ALDLATTVER IQQNFCISDP TLPDCPIVFA SDAFLELTGY 

       250        260        270        280        290        300 
SREEVLGRNC RFLQGAGTDR GTVDQIRAAI KEGSELTVRI LNYTKAGKAF WNMFTLAPMR 

       310        320        330        340        350        360 
DQDGHARFFV GVQVDVTAQS TSPDKAPVWN KTPEEEVAKA KMGAEAASLI SSALQGMAAP 

       370        380        390        400        410        420 
TTANPWAAIS GVIMRRKPHK ADDKAYQALL QLQERDGKMK LMHFRRVKQL GAGDVGLVDL 

       430        440        450        460        470        480 
VQLQGSELKF AMKTLDKFEM QERNKVARVL TESAILAAVD HPFLATLYCT IQTDTHLHFV 

       490        500        510        520        530        540 
MEYCEGGELY GLLNSQPKKR LKEEHVRFYA SEVLTALQYL HLLGYVYRDL KPENILLHHT 

       550        560        570        580        590        600 
GHVLLTDFDL SYSKGSTTPR IEKIGGAGAA GGSAPKSPKK SSSKSGGSSS GSALQLENYL 

       610        620        630        640        650        660 
LLAEPSARAN SFVGTEEYLA PEVINAAGHG PAAVDWWSLG ILIFELLYGT TPFRGARRDE 

       670        680        690        700        710        720 
TFENIIKSPL KFPSKPAVSE ECRDLIEKLL VKDVGARLGS RTGANEIKSH PWFKGINWAL 

       730        740        750 
LRHQQPPYVP RRASKAAGGS STGGAAFDNY

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References

[1]	"Isolation and characterization of a Chlamydomonas gene that encodes a putative blue-light photoreceptor of the phototropin family." Huang K., Merkle T., Beck C.F. Physiol. Plantarum 115:613-622(2002) [PubMed: 12121468] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: CW15 EMBL CAC94940.1.
[2]	"Crystal structures and molecular mechanism of a light-induced signaling switch: The Phot-LOV1 domain from Chlamydomonas reinhardtii." Fedorov R., Schlichting I., Hartmann E., Domratcheva T., Fuhrmann M., Hegemann P. Biophys. J. 84:2474-2482(2003) [PubMed: 12668455] [Abstract] Cited for: X-RAY CRYSTALLOGRAPHY (1.90 ANGSTROMS) OF 17-125 IN COMPLEX WITH FMN.
+	Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ

AJ416556 Genomic DNA. Translation: CAC94940.1.

3D structure databases

PDBe
RCSB PDB
PDBj

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
1N9L	X-ray	1.90	A	17-125	[»]
1N9N	X-ray	2.30	A	17-125	[»]
1N9O	X-ray	2.80	A	17-125	[»]

ProteinModelPortal

Q8LPE0.

SMR

Q8LPE0. Positions 17-125, 204-317.

ModBase

Search...

Proteomic databases

PRIDE

Q8LPE0.

Protocols and materials databases

StructuralBiologyKnowledgebase

Search...

Family and domain databases

InterPro

IPR000961. AGC-kinase_C.
IPR011009. Kinase-like_dom.
IPR001610. PAC.
IPR000014. PAS.
IPR000700. PAS-assoc_C.
IPR013655. PAS_fold_3.
IPR000719. Prot_kinase_cat_dom.
IPR017442. Se/Thr_kinase-like_dom.
IPR008271. Ser/Thr_kinase_AS.
IPR002290. Ser/Thr_kinase_dom.
[Graphical view]

Pfam

PF08447. PAS_3. 2 hits.
PF00069. Pkinase. 2 hits.
[Graphical view]

SMART

SM00086. PAC. 2 hits.
SM00091. PAS. 2 hits.
SM00220. S_TKc. 1 hit.
[Graphical view]

SUPFAM

SSF56112. Kinase_like. 1 hit.

TIGRFAMs

TIGR00229. Sensory_box. 2 hits.

PROSITE

PS51285. AGC_KINASE_CTER. 1 hit.
PS50113. PAC. 2 hits.
PS50112. PAS. 2 hits.
PS50011. PROTEIN_KINASE_DOM. 1 hit.
PS00108. PROTEIN_KINASE_ST. 1 hit.
[Graphical view]

ProtoNet

Search...

Entry information

Entry name

Q8LPE0_CHLRE

Accession

Primary (citable) accession number: Q8LPE0

Entry history

Integrated into UniProtKB/TrEMBL:	October 1, 2002
Last sequence update:	October 1, 2002
Last modified:	September 21, 2011
This is version 56 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)