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Protein

Putative clathrin assembly protein At2g25430

Gene

At2g25430

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Biological processEndocytosis

Names & Taxonomyi

Protein namesi
Recommended name:
Putative clathrin assembly protein At2g25430
Gene namesi
Ordered Locus Names:At2g25430
ORF Names:F13B15.9
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 2

Organism-specific databases

AraportiAT2G25430
TAIRilocus:2040115 AT2G25430

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Coated pit, Cytoplasmic vesicle, Golgi apparatus, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001870681 – 653Putative clathrin assembly protein At2g25430Add BLAST653

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei221PhosphoserineBy similarity1
Modified residuei244PhosphothreonineCombined sources1

Keywords - PTMi

Phosphoprotein

Proteomic databases

PaxDbiQ8LF20
PRIDEiQ8LF20

PTM databases

iPTMnetiQ8LF20

Expressioni

Gene expression databases

ExpressionAtlasiQ8LF20 baseline and differential
GenevisibleiQ8LF20 AT

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

STRINGi3702.AT2G25430.1

Structurei

3D structure databases

ProteinModelPortaliQ8LF20
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini23 – 159ENTHPROSITE-ProRule annotationAdd BLAST137

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Compositional biasi198 – 236Gly-richAdd BLAST39
Compositional biasi391 – 431Pro-richAdd BLAST41

Phylogenomic databases

eggNOGiKOG0251 Eukaryota
ENOG410XQ90 LUCA
HOGENOMiHOG000238534
InParanoidiQ8LF20
OMAiGYGGVPK
OrthoDBiEOG09360683
PhylomeDBiQ8LF20

Family and domain databases

Gene3Di1.20.58.150, 1 hit
1.25.40.90, 1 hit
InterProiView protein in InterPro
IPR011417 ANTH_dom
IPR014712 Clathrin_AP_dom2
IPR013809 ENTH
IPR008942 ENTH_VHS
PfamiView protein in Pfam
PF07651 ANTH, 2 hits
SMARTiView protein in SMART
SM00273 ENTH, 1 hit
SUPFAMiSSF48464 SSF48464, 1 hit
PROSITEiView protein in PROSITE
PS50942 ENTH, 1 hit

Sequencei

Sequence statusi: Complete.

Q8LF20-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAPSIRKAIG AVKDQTSIGI AKVASNMAPD LEVAIVKATS HDDDPASEKY
60 70 80 90 100
IREILNLTSL SRGYILACVT SVSRRLSKTR DWVVALKALM LVHRLLNEGD
110 120 130 140 150
PIFQEEILYS TRRGTRMLNM SDFRDEAHSS SWDHSAFVRT YAGYLDQRLE
160 170 180 190 200
LALFERKSGV SVNSGGNSSH HSNNDDRYGR GRDDFRSPPP RSYDYENGGG
210 220 230 240 250
GGSDFRGDNN GYGGVPKRSR SYGDMTEMGG GGGGGGRDEK KVVTPLREMT
260 270 280 290 300
PERIFGKMGH LQRLLDRFLS LRPTGLAKNS RMILIALYPV VRESFKLYAD
310 320 330 340 350
ICEVLAVLLD KFFDMEYSDC VKAFDAYASA AKQIDELIAF YNWCKETGVA
360 370 380 390 400
RSSEYPEVQR ITSKLLETLE EFVRDRAKRG KSPERKEIEA PPPVVEEEEP
410 420 430 440 450
EPDMNEIKAL PPPENYTPPP PPEPEPQPEK PQFTEDLVNL REDEVTADDQ
460 470 480 490 500
GNKFALALFA GPPGNNGKWE AFSSNGVTSA WQNPAAEPGK ADWELALVET
510 520 530 540 550
TSNLEKQTAA LGGGFDNLLL NGMYDQGMVR QHVSTSQLTG GSASSVALPL
560 570 580 590 600
PGKTNNQVLA LPAPDGTVEK VNQDPFAASL TIPPPSYVQM AEMEKKQYLL
610 620 630 640 650
SQEQQLWQQY QRDGMRGQAS LAKMNTGPVP AYGMPPVNGM GPPPTGYYYN

NPY
Length:653
Mass (Da):72,084
Last modified:April 13, 2004 - v2
Checksum:iA61B21EBA98206D0
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sequence conflicti203Missing in AAM61646 (Ref. 4) Curated1
Sequence conflicti236G → GG in AAM61646 (Ref. 4) Curated1
Sequence conflicti501T → A in AAM61646 (Ref. 4) Curated1
Sequence conflicti631A → T in AAM61646 (Ref. 4) Curated1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC006300 Genomic DNA Translation: AAD20703.1
CP002685 Genomic DNA Translation: AEC07701.1
AY139760 mRNA Translation: AAM98081.1
BT008299 mRNA Translation: AAP37658.1
AY085092 mRNA Translation: AAM61646.1
PIRiC84648
RefSeqiNP_565595.1, NM_128100.4
UniGeneiAt.20747

Genome annotation databases

EnsemblPlantsiAT2G25430.1; AT2G25430.1; AT2G25430
GeneIDi817081
GrameneiAT2G25430.1; AT2G25430.1; AT2G25430
KEGGiath:AT2G25430

Similar proteinsi

Entry informationi

Entry nameiCAP2_ARATH
AccessioniPrimary (citable) accession number: Q8LF20
Secondary accession number(s): Q9SKK6
Entry historyiIntegrated into UniProtKB/Swiss-Prot: April 13, 2004
Last sequence update: April 13, 2004
Last modified: April 25, 2018
This is version 103 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome
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Main funding by: National Institutes of Health