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Protein

Probable 6-phosphogluconolactonase 3

Gene

At5g24420

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

Hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate.By similarity

Catalytic activityi

6-phospho-D-glucono-1,5-lactone + H2O = 6-phospho-D-gluconate.

Pathwayi

GO - Molecular functioni

  1. 6-phosphogluconolactonase activity Source: UniProtKB-EC

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
  2. pentose-phosphate shunt Source: UniProtKB-UniPathway
Complete GO annotation...

Keywords - Molecular functioni

Hydrolase

Enzyme and pathway databases

BioCyciARA:AT5G24420-MONOMER.
BRENDAi3.1.1.31. 399.
ReactomeiREACT_281719. Pentose phosphate pathway (hexose monophosphate shunt).
UniPathwayiUPA00115; UER00409.

Names & Taxonomyi

Protein namesi
Recommended name:
Probable 6-phosphogluconolactonase 3 (EC:3.1.1.31)
Short name:
6PGL 3
Gene namesi
Ordered Locus Names:At5g24420
ORF Names:K16H17.13
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
ProteomesiUP000006548 Componenti: Chromosome 5

Organism-specific databases

TAIRiAT5G24420.

Subcellular locationi

GO - Cellular componenti

  1. cytosol Source: TAIR
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 252252Probable 6-phosphogluconolactonase 3PRO_0000288670Add
BLAST

Proteomic databases

PaxDbiQ8LEV7.
PRIDEiQ8LEV7.

Expressioni

Gene expression databases

GenevestigatoriQ8LEV7.

Interactioni

Protein-protein interaction databases

STRINGi3702.AT5G24420.1-P.

Structurei

3D structure databases

SMRiQ8LEV7. Positions 8-252.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG0363.
HOGENOMiHOG000256285.
InParanoidiQ8LEV7.
KOiK01057.
OMAiKLAWCLP.
PhylomeDBiQ8LEV7.

Family and domain databases

InterProiIPR005900. 6-phosphogluconolactonase_DevB.
IPR006148. Glc/Gal-6P_isomerase.
[Graphical view]
PfamiPF01182. Glucosamine_iso. 1 hit.
[Graphical view]
TIGRFAMsiTIGR01198. pgl. 1 hit.

Sequencei

Sequence statusi: Complete.

Q8LEV7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAQRKMIVFP TKNELSEAMA EYTANLSAKF IKEKGLFTVV LSGGDLIDWL
60 70 80 90 100
CKLVQPPYID SIEWPKWHVF WVDERVCAWE DPDSNYKLAM EGFLSKVPIP
110 120 130 140 150
DKNIYAIDKH LAADGNAEHC ATLYEECLKN LVKEKIIPIS KKTGYPEFDL
160 170 180 190 200
QLLGMGPDGH MASLFPNHPQ INEKQKWVTY ITDSPKPPPK RITFTLPVIN
210 220 230 240 250
STLYNLMAIC DKAPAKSVAE IMKHNNLSLP SAHLSAQVEN VWYLDQAAAS

EL
Length:252
Mass (Da):28,476
Last modified:May 29, 2007 - v2
Checksum:iFAFEECE1F712FDA1
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti65 – 651P → S in AAM61753 (Ref. 4) Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB016884 Genomic DNA. Translation: BAB11235.1.
CP002688 Genomic DNA. Translation: AED93309.1.
AF378879 mRNA. Translation: AAK55682.1.
AY052737 mRNA. Translation: AAK96451.1.
AY085203 mRNA. Translation: AAM61753.1.
RefSeqiNP_197830.1. NM_122350.3.
UniGeneiAt.8628.

Genome annotation databases

EnsemblPlantsiAT5G24420.1; AT5G24420.1; AT5G24420.
GeneIDi832513.
KEGGiath:AT5G24420.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB016884 Genomic DNA. Translation: BAB11235.1.
CP002688 Genomic DNA. Translation: AED93309.1.
AF378879 mRNA. Translation: AAK55682.1.
AY052737 mRNA. Translation: AAK96451.1.
AY085203 mRNA. Translation: AAM61753.1.
RefSeqiNP_197830.1. NM_122350.3.
UniGeneiAt.8628.

3D structure databases

SMRiQ8LEV7. Positions 8-252.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi3702.AT5G24420.1-P.

Proteomic databases

PaxDbiQ8LEV7.
PRIDEiQ8LEV7.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiAT5G24420.1; AT5G24420.1; AT5G24420.
GeneIDi832513.
KEGGiath:AT5G24420.

Organism-specific databases

TAIRiAT5G24420.

Phylogenomic databases

eggNOGiCOG0363.
HOGENOMiHOG000256285.
InParanoidiQ8LEV7.
KOiK01057.
OMAiKLAWCLP.
PhylomeDBiQ8LEV7.

Enzyme and pathway databases

UniPathwayiUPA00115; UER00409.
BioCyciARA:AT5G24420-MONOMER.
BRENDAi3.1.1.31. 399.
ReactomeiREACT_281719. Pentose phosphate pathway (hexose monophosphate shunt).

Gene expression databases

GenevestigatoriQ8LEV7.

Family and domain databases

InterProiIPR005900. 6-phosphogluconolactonase_DevB.
IPR006148. Glc/Gal-6P_isomerase.
[Graphical view]
PfamiPF01182. Glucosamine_iso. 1 hit.
[Graphical view]
TIGRFAMsiTIGR01198. pgl. 1 hit.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Structural analysis of Arabidopsis thaliana chromosome 5. VIII. Sequence features of the regions of 1,081,958 bp covered by seventeen physically assigned P1 and TAC clones."
    Asamizu E., Sato S., Kaneko T., Nakamura Y., Kotani H., Miyajima N., Tabata S.
    DNA Res. 5:379-391(1997) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Columbia.
  2. The Arabidopsis Information Resource (TAIR)
    Submitted (MAR-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: GENOME REANNOTATION.
    Strain: cv. Columbia.
  3. "Empirical analysis of transcriptional activity in the Arabidopsis genome."
    Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M., Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G., Liu S.X., Lam B., Sakano H., Wu T., Yu G.
    , Miranda M., Quach H.L., Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C., Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J., Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A., Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C., Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X., Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M., Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K., Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R.
    Science 302:842-846(2002) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: cv. Columbia.
  4. "Full-length cDNA from Arabidopsis thaliana."
    Brover V.V., Troukhan M.E., Alexandrov N.A., Lu Y.-P., Flavell R.B., Feldmann K.A.
    Submitted (FEB-2002) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].

Entry informationi

Entry namei6PGL3_ARATH
AccessioniPrimary (citable) accession number: Q8LEV7
Secondary accession number(s): Q9FIN0
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 29, 2007
Last sequence update: May 29, 2007
Last modified: April 1, 2015
This is version 71 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.