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Unreviewed, UniProtKB/TrEMBL Q8LE56 (Q8LE56_ARATH)

Last modified May 5, 2009. Version 30. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · Ontologies · Sequences · References · Cross-references · Entry information

Names and origin

Protein namesSubmitted name:
    Putative uncharacterized protein EMBL AAM62831.1
Submitted name:
    Putative uncharacterized protein At4g37240 EMBL AAO63958.1
    Putative uncharacterized protein At4g37240/C7A10_120 EMBL BAC42928.1
Gene names
Name: At4g37240/C7A10_120 EMBL BAC42928.1
Ordered Locus Names: At4g37240 TAIR At4g37240
OrganismArabidopsis thaliana (Mouse-ear cress) [Complete proteome]
Taxonomic identifier3702 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonscore eudicotyledonsrosidseurosids IIBrassicalesBrassicaceaeArabidopsis

Protein attributes

Sequence length168 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existenceEvidence at transcript level.

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular functionprotein binding

Inferred from physical interaction. Source: IntAct

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q8LE56-1 [UniParc].

Last modified October 1, 2002. Version 1.
Checksum: 4372376F5DE43B8F

FASTA16818,028
        10         20         30         40         50         60 
MGICSSSEST QVATAKLILQ DGRMMEFANP VKVGYVLLKY PMCFICNSDD MDFDDAVAAI 

        70         80         90        100        110        120 
SADEELQLGQ IYFALPLCWL RQPLKAEEMA ALAVKASSAL MRGGGGGCRR KCVEPIVSDK 

       130        140        150        160 
LRMRVGSGDD TVGSGSGRRK VRNGDGGGSV SSSRRRKCYA AELSTIDE 

« Hide

References

[1]"Full-length messenger RNA sequences greatly improve genome annotation."
Haas B.J., Volfovsky N., Town C.D., Troukhan M., Alexandrov N., Feldmann K.A., Flavell R.B., White O., Salzberg S.L.
Genome Biol. 3:RESEARCH0029-RESEARCH0029(2002) [PubMed: 12093376] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
[2]"Features of Arabidopsis genes and genome discovered using full-length cDNAs."
Alexandrov N.A., Troukhan M.E., Brover V.V., Flavell R.B., Feldmann K.A.
Plant Mol. Biol. 60:71-87(2006)
Cited for: NUCLEOTIDE SEQUENCE.
[3]Brover V., Troukhan M., Alexandrov N., Lu Y.-P., Flavell R., Feldmann K.
Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[4]"Arabidopsis Open Reading Frame (ORF) Clones."
Yamada K., Chan M.M., Chang C.H., Dale J.M., Hsuan V.W., Lee J.M., Onodera C.S., Quach H.L., Tang C., Toriumi M., Wong C., Wu H.C., Yu G., Yuan S., Carninci P., Chen H., Cheuk R., Hayashizaki Y. expand/collapse author list , Ishida J., Jones T., Kamiya A., Kawai J., Kim C.J., Narusaka M., Nguyen M., Palm C.J., Sakurai T., Satou M., Seki M., Shinn P., Southwick A., Tripp M.G., Wu T., Shinozaki K., Davis R.W., Ecker J.R., Theologis A.
Submitted (MAR-2003) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[5]"Arabidopsis thaliana full-length cDNA."
Seki M., Iida K., Satou M., Sakurai T., Akiyama K., Ishida J., Nakajima M., Enju A., Kamiya A., Narusaka M., Carninci P., Kawai J., Hayashizaki Y., Shinozaki K.
Submitted (NOV-2002) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.

Cross-references

Sequence databases

AY085610 mRNA. Translation: AAM62831.1.
BT005538 mRNA. Translation: AAO63958.1.
AK118312 mRNA. Translation: BAC42928.1.
IPIIPI00533280.
RefSeqNP_568020.1.
UniGeneAt.43110

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

IntActQ8LE56. 8 interactions.

Genome annotation databases

GeneID829878.
KEGGath:AT4G37240.
NMPDRfig|3702.1.peg.21834.

Organism-specific databases

TAIRAt4g37240.

Phylogenomic databases

OMAQ8LE56. CESTHVA.

Family and domain databases

ProtoNetSearch...

Entry information

Entry nameQ8LE56_ARATH
AccessionPrimary (citable) accession number: Q8LE56
Entry history
Integrated into UniProtKB/TrEMBL: October 1, 2002
Last sequence update: October 1, 2002
Last modified: May 5, 2009
This is version 30 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
Names and origin · Protein attributes · Ontologies · Sequences · References · Cross-references · Entry information