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Unreviewed, UniProtKB/TrEMBL Q8LE52 (Q8LE52_ARATH)

Last modified June 16, 2009. Version 56. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Binary interactions · Sequences · References · Cross-references · Entry information

Names and origin

Protein namesSubmitted name:
    Dehydroascorbate reductase EMBL AAM62837.1
Gene names
Name: At5g16705 EMBL BAD44633.1
Synonyms: At5g16705/At5g16710 EMBL BAC43202.1
Ordered Locus Names: At5g16710 TAIR At5g16710
OrganismArabidopsis thaliana (Mouse-ear cress) [Complete proteome]
Taxonomic identifier3702 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonscore eudicotyledonsrosidseurosids IIBrassicalesBrassicaceaeArabidopsis

Protein attributes

Sequence length258 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existenceEvidence at protein level.

General annotation (Comments)

Binary interactions

With

Entry

#Exp.

IntAct

Notes

TRX3Q424031EBI-449357,EBI-449157

Sequences

Sequence LengthMass (Da)Tools
Q8LE52-1 [UniParc].

Last modified October 1, 2002. Version 1.
Checksum: 35AC1A8EFDD3E77C

FASTA25828,514
        10         20         30         40         50         60 
MISLRFQPST TAGVLSASVS RAGFIKRCGS TKPGRVGRFV TMATAASPLE ICVKASITTP 

        70         80         90        100        110        120 
NKLGDCPFCQ KVLLTMEEKN VPYDMKMVDL SNKPEWFLKI SPEGKVPVVK FDEKWVPDSD 

       130        140        150        160        170        180 
VITQALEEKY PEPPLATPPE KASVGSKIFS TFVGFLKSKD SGDGTEQVLL DELTTFNDYI 

       190        200        210        220        230        240 
KDNGPFINGE KISAADLSLA PKLYHMKIAL GHYKNWSVPD SLPFVKSYME NVFSRESFTN 

       250 
TRAETEDVIA GWRPKVMG 

« Hide

References

[1]"Full-length messenger RNA sequences greatly improve genome annotation."
Haas B.J., Volfovsky N., Town C.D., Troukhan M., Alexandrov N., Feldmann K.A., Flavell R.B., White O., Salzberg S.L.
Genome Biol. 3:RESEARCH0029-RESEARCH0029(2002) [PubMed: 12093376] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
[2]"Features of Arabidopsis genes and genome discovered using full-length cDNAs."
Alexandrov N.A., Troukhan M.E., Brover V.V., Flavell R.B., Feldmann K.A.
Plant Mol. Biol. 60:71-87(2006)
Cited for: NUCLEOTIDE SEQUENCE.
[3]Brover V., Troukhan M., Alexandrov N., Lu Y.-P., Flavell R., Feldmann K.
Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[4]"Large-scale analysis of RIKEN Arabidopsis full-length (RAFL) cDNAs."
Totoki Y., Seki M., Ishida J., Nakajima M., Enju A., Kamiya A., Narusaka M., Shin-i T., Nakagawa M., Sakamoto N., Oishi K., Kohara Y., Kobayashi M., Toyoda A., Sakaki Y., Sakurai T., Iida K., Akiyama K. expand/collapse author list , Satou M., Toyoda T., Konagaya A., Carninci P., Kawai J., Hayashizaki Y., Shinozaki K.
Submitted (SEP-2004) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[5]"Arabidopsis thaliana full-length cDNA."
Seki M., Iida K., Satou M., Sakurai T., Akiyama K., Ishida J., Nakajima M., Enju A., Kamiya A., Narusaka M., Carninci P., Kawai J., Hayashizaki Y., Shinozaki K.
Submitted (NOV-2002) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.

Cross-references

Sequence databases

AY085616 mRNA. Translation: AAM62837.1.
AK118603 mRNA. Translation: BAC43202.1.
AK175537 mRNA. Translation: BAD43300.1.
AK175798 mRNA. Translation: BAD43561.1.
AK176039 mRNA. Translation: BAD43802.1.
AK176071 mRNA. Translation: BAD43834.1.
AK176708 mRNA. Translation: BAD44471.1.
AK176870 mRNA. Translation: BAD44633.1.
IPIIPI00540932.
RefSeqNP_568336.1.
UniGeneAt.16881

3D structure databases

HSSPHSSP built from PDB template 1OYJ based on UniProtKB O65032.
ModBaseSearch...

Protein-protein interaction databases

IntActQ8LE52. 1 interaction.

Proteomic databases

PRIDEQ8LE52.
ProMEXQ8LE52.

Genome annotation databases

GeneID831532.
KEGGath:AT5G16710.

Organism-specific databases

TAIRAt5g16710.

Phylogenomic databases

OMAQ8LE52. RHRESNT.

Family and domain databases

InterProIPR010987. Glutathione-S-Trfase_C-like.
IPR004045. Glutathione_S-Trfase_N.
IPR017933. Glutathione_S_Trfase/Cl_chnl_C.
IPR012335. Thioredoxin_fold.
[Graphical view]
Gene3DG3DSA:1.20.1050.10. GST_C_like. 1 hit.
G3DSA:3.40.30.10. Thioredoxin_fold. 1 hit.
PfamPF02798. GST_N. 1 hit.
[Graphical view]
PROSITEPS50405. GST_CTER. 1 hit.
PS50404. GST_NTER. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ8LE52_ARATH
AccessionPrimary (citable) accession number: Q8LE52
Entry history
Integrated into UniProtKB/TrEMBL: October 1, 2002
Last sequence update: October 1, 2002
Last modified: June 16, 2009
This is version 56 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Binary interactions · Sequences · References · Cross-references · Entry information