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Q8LDM8

- Q8LDM8_ARATH

UniProt

Q8LDM8 - Q8LDM8_ARATH

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Protein
Submitted name:

CCT motif family protein

Gene
At1g07050
Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Unreviewed - Annotation score: 1 out of 5 - Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Submitted name:
CCT motif family proteinImported
Submitted name:
Putative uncharacterized protein At1g07050Imported
Gene namesi
Ordered Locus Names:At1g07050Imported
OrganismiArabidopsis thaliana (Mouse-ear cress)Imported
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
ProteomesiUP000006548: Chromosome 1

Organism-specific databases

TAIRiAT1G07050.

Expressioni

Gene expression databases

GenevestigatoriQ8LDM8.

Interactioni

Protein-protein interaction databases

STRINGi3702.AT1G07050.1-P.

Family & Domainsi

Phylogenomic databases

eggNOGiNOG283732.
HOGENOMiHOG000090331.
InParanoidiQ8LDM8.
OMAiDFWEEDE.

Family and domain databases

InterProiIPR010402. CCT_domain.
[Graphical view]
PfamiPF06203. CCT. 1 hit.
[Graphical view]
PROSITEiPS51017. CCT. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q8LDM8-1 [UniParc]FASTAAdd to Basket

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MDTQRLPKKE EEEEEDHLLS STFESINGHS RDQHNHSIDD FESIFDITID    50
NLSCSNELTW DFWEEDEDED VGEEEKRSST DQEGSSFGFW ENKPTDYEDK 100
DLGLKLNLNH QEVIDAWSDH QKPLWTDTST LDNSVYRGEV PVIEEKRNMR 150
REASVLRYKE KRQSRLFSKK IRYQVRKLNA DKRPRFKGRF VKRET 195
Length:195
Mass (Da):23,320
Last modified:October 1, 2002 - v1
Checksum:i6F81EB7DFEFC3025
GO

Non-terminal residue

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei195 – 1951Imported

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AY085907 mRNA. Translation: AAM63119.1.
CP002684 Genomic DNA. Translation: AEE28072.1.
AK176556 mRNA. Translation: BAD44319.1.
AB493438 mRNA. Translation: BAH30276.1.
RefSeqiNP_563778.1. NM_100579.2.
UniGeneiAt.42316.

Genome annotation databases

EnsemblPlantsiAT1G07050.1; AT1G07050.1; AT1G07050.
GeneIDi837216.
KEGGiath:AT1G07050.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AY085907 mRNA. Translation: AAM63119.1 .
CP002684 Genomic DNA. Translation: AEE28072.1 .
AK176556 mRNA. Translation: BAD44319.1 .
AB493438 mRNA. Translation: BAH30276.1 .
RefSeqi NP_563778.1. NM_100579.2.
UniGenei At.42316.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 3702.AT1G07050.1-P.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblPlantsi AT1G07050.1 ; AT1G07050.1 ; AT1G07050 .
GeneIDi 837216.
KEGGi ath:AT1G07050.

Organism-specific databases

TAIRi AT1G07050.

Phylogenomic databases

eggNOGi NOG283732.
HOGENOMi HOG000090331.
InParanoidi Q8LDM8.
OMAi DFWEEDE.

Gene expression databases

Genevestigatori Q8LDM8.

Family and domain databases

InterProi IPR010402. CCT_domain.
[Graphical view ]
Pfami PF06203. CCT. 1 hit.
[Graphical view ]
PROSITEi PS51017. CCT. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana."
    Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O., Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E., Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K.
    , Conn L., Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P., Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D., Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J., Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L., Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A., Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A., Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M., Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M., Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P., Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D., Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D., Yu G., Fraser C.M., Venter J.C., Davis R.W.
    Nature 408:816-820(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Columbia.
  2. "Full-length messenger RNA sequences greatly improve genome annotation."
    Haas B.J., Volfovsky N., Town C.D., Troukhan M., Alexandrov N., Feldmann K.A., Flavell R.B., White O., Salzberg S.L.
    Genome Biol. 3:RESEARCH0029-RESEARCH0029(2002) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
  3. Brover V., Troukhan M., Alexandrov N., Lu Y.-P., Flavell R., Feldmann K.
    Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
  4. "Large-scale analysis of RIKEN Arabidopsis full-length (RAFL) cDNAs."
    Totoki Y., Seki M., Ishida J., Nakajima M., Enju A., Kamiya A., Narusaka M., Shin-i T., Nakagawa M., Sakamoto N., Oishi K., Kohara Y., Kobayashi M., Toyoda A., Sakaki Y., Sakurai T., Iida K., Akiyama K.
    , Satou M., Toyoda T., Konagaya A., Carninci P., Kawai J., Hayashizaki Y., Shinozaki K.
    Submitted (SEP-2004) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
  5. "Features of Arabidopsis genes and genome discovered using full-length cDNAs."
    Alexandrov N.A., Troukhan M.E., Brover V.V., Flavell R.B., Feldmann K.A.
    Plant Mol. Biol. 60:71-87(2006)
    Cited for: NUCLEOTIDE SEQUENCE.
  6. "ORF Cloning and Analysis of Arabidopsis Transcription Factor Genes."
    Fujita M.
    Submitted (MAR-2009) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
  7. TAIR
    Swarbreck D., Lamesch P., Wilks C., Huala E.
    Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
  8. The Arabidopsis Information Resource (TAIR)
    Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: GENOME REANNOTATION.
    Strain: cv. Columbia.

Entry informationi

Entry nameiQ8LDM8_ARATH
AccessioniPrimary (citable) accession number: Q8LDM8
Entry historyi
Integrated into UniProtKB/TrEMBL: October 1, 2002
Last sequence update: October 1, 2002
Last modified: September 3, 2014
This is version 63 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

External Data

Dasty 3

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