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Q8LD60 (Q8LD60_ARATH) Unreviewed, UniProtKB/TrEMBL

Last modified November 16, 2011. Version 25. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
OrganismArabidopsis thaliana (Mouse-ear cress) EMBL AAM64263.1
Taxonomic identifier3702 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonscore eudicotyledonsrosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis

Protein attributes

Sequence length273 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

Ontologies

Gene Ontology (GO)
   Cellular componentmembrane

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q8LD60 [UniParc].

Last modified October 1, 2002. Version 1.
Checksum: 21979838934FA983

FASTA27331,603
        10         20         30         40         50         60 
MTTIVVLLHT PTFSVFSDEE ETESSSPIYL NGSLHLNIHI VSSEAKVENF HTLRTRTPIV 

        70         80         90        100        110        120 
QLNASEASEA VISRKRRKRK KRKKTKDDLI LTDPPPAPRH VLSSSERRAL SLPPKKALTY 

       130        140        150        160        170        180 
AKLEIQRAPE VINDTDLFAP LFRNLSVFKR SYELMELILK VYIYPDGDKP IFHEPHLNGI 

       190        200        210        220        230        240 
YASEGWFMKL MESNTQFVTK NPEKAHLFYM PYSVKQLQKS IFVPGSHNIK PLSIFLRDYV 

       250        260        270 
NMLSIKYPFW NRTHGSDHFL VACHDWVSKM FLC 

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References

[1]"Full-length messenger RNA sequences greatly improve genome annotation."
Haas B.J., Volfovsky N., Town C.D., Troukhan M., Alexandrov N., Feldmann K.A., Flavell R.B., White O., Salzberg S.L.
Genome Biol. 3:RESEARCH0029-RESEARCH0029(2002) [PubMed: 12093376] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
[2]"Features of Arabidopsis genes and genome discovered using full-length cDNAs."
Alexandrov N.A., Troukhan M.E., Brover V.V., Flavell R.B., Feldmann K.A.
Plant Mol. Biol. 60:71-87(2006)
Cited for: NUCLEOTIDE SEQUENCE.
[3]Brover V., Troukhan M., Alexandrov N., Lu Y.-P., Flavell R., Feldmann K.
Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AY086184 mRNA. Translation: AAM64263.1.
IPIIPI00522184.

3D structure databases

ModBaseSearch...

Protein family/group databases

CAZyGT47. Glycosyltransferase Family 47.

Proteomic databases

PRIDEQ8LD60.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Phylogenomic databases

eggNOGKOG1021.
GeneTreeEPGT00070000028744.

Gene expression databases

GenevestigatorQ8LD60.

Family and domain databases

InterProIPR004263. Exostosin.
[Graphical view]
PfamPF03016. Exostosin. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ8LD60_ARATH
AccessionPrimary (citable) accession number: Q8LD60
Entry history
Integrated into UniProtKB/TrEMBL: October 1, 2002
Last sequence update: October 1, 2002
Last modified: November 16, 2011
This is version 25 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)