Unreviewed, UniProtKB/TrEMBL Q8LCQ9 (Q8LCQ9_ARATH)

Names and origin

Protein names	Submitted name:     NADP-dependent malate dehydrogenase EMBL AAM63456.1
Organism	Arabidopsis thaliana (Mouse-ear cress) EMBL AAM63456.1
Taxonomic identifier	3702 [NCBI]
Taxonomic lineage	Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › eurosids II › Brassicales › Brassicaceae › Arabidopsis

Protein attributes

Sequence length	441 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Evidence at protein level.

General annotation (Comments)

Sequence similarities

Belongs to the LDH/MDH superfamily. RuleBase RU003369V0 Belongs to the LDH/MDH superfamily. MDH type 2 family. RuleBase RU000421V1

Ontologies

Keywords
Molecular function	Oxidoreductase RuleBase RU003369V0
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro malate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	malate dehydrogenase (NADP+) activity Inferred from electronic annotation. Source: InterPro protein binding Inferred from physical interaction. Source: IntAct
Complete GO annotation...

Binary interactions

With	Entry	#Exp.	IntAct	Notes
TRX3	Q42403	1	EBI-449272,EBI-449157

Sequences

	Sequence		Length	Mass (Da)
	Q8LCQ9-1 [UniParc]. Last modified October 1, 2002. Version 1. Checksum: 8E629EDA96D815C1	FASTA	441	48,130
	10 20 30 40 50 60 MAELSTPKTT SPFLNSSSRL RLSSKLHLSN HFRHLLLPPL HTTTPNSKIS CSVSQNSQAP 70 80 90 100 110 120 VAVQENGLVK TKKECYGVFC LTYDLKAEEE TRSWKKLINI AVSGAAGMIS NHLLFKLASG 130 140 150 160 170 180 EVFGPDQPIA LKLLGSERSI QALEGVAMEL EDSLFPLLRE VDIGTDPNEV FQDVEWAILI 190 200 210 220 230 240 GAKPRGPGME RADLLDINGQ IFAEQGKALN KAASPNVKVL VVGNPCNTNA LICLKNAPNI 250 260 270 280 290 300 PAKNFHALTR LDENRAKCQL ALKAGVFYDK VSNMTIWGNH STTQVPDFLN ARINGLPVKE 310 320 330 340 350 360 VITDHKWLEE GFTESVQKRG GLLIQKWGRS SAASTAVSIV DAIKSLVTPT PEGDWFSTGV 370 380 390 400 410 420 YTDGNPYGIE EGLVFSMLCR SKGDGDYELV KDVEIDDYLR QRIAKSEAEL LAEKRCVAHL 430 440 TGEGIAYCDL GPVDTMLPGE V

References

[1]	"Full-length messenger RNA sequences greatly improve genome annotation." Haas B.J., Volfovsky N., Town C.D., Troukhan M., Alexandrov N., Feldmann K.A., Flavell R.B., White O., Salzberg S.L. Genome Biol. 3:RESEARCH0029-RESEARCH0029(2002) [PubMed: 12093376] [Abstract] Cited for: NUCLEOTIDE SEQUENCE.
[2]	"Features of Arabidopsis genes and genome discovered using full-length cDNAs." Alexandrov N.A., Troukhan M.E., Brover V.V., Flavell R.B., Feldmann K.A. Plant Mol. Biol. 60:71-87(2006) Cited for: NUCLEOTIDE SEQUENCE.
[3]	Brover V., Troukhan M., Alexandrov N., Lu Y.-P., Flavell R., Feldmann K. Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.

Cross-references

Sequence databases
EMBLGenBankDDBJ	AY086453 mRNA. Translation: AAM63456.1.
IPI	IPI00518845.
3D structure databases
HSSP	HSSP built from PDB template 7MDH based on UniProtKB P17606.
SMR	Q8LCQ9. Positions 72-438.
ModBase	Search...
Protein-protein interaction databases
IntAct	Q8LCQ9. 1 interaction.
Family and domain databases
InterPro	IPR001236. Lactate/malate_DH. IPR015955. Lactate_DH/Glyco_Ohase_4_C. IPR001252. Malate_DH_AS. IPR011273. Malate_DH_NADP-dep_pln. IPR010945. Malate_DH_SF1. IPR016040. NAD(P)-bd_dom. [Graphical view]
Gene3D	G3DSA:3.90.110.10. lact_mal_DH. 1 hit. G3DSA:3.40.50.720. NAD(P)-bd. 1 hit.
PANTHER	PTHR23382. MDH_SF1. 1 hit.
Pfam	PF02866. Ldh_1_C. 1 hit. PF00056. Ldh_1_N. 1 hit. [Graphical view]
ProDom	PD003052. Mal_dehydrog. 1 hit. [Graphical view] [Entries sharing at least one domain]
TIGRFAMs	TIGR01757. Malate-DH_plant. 1 hit. TIGR01759. MalateDH-SF1. 1 hit.
PROSITE	PS00068. MDH. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q8LCQ9_ARATH

Accession

Primary (citable) accession number: Q8LCQ9

Entry history

Integrated into UniProtKB/TrEMBL:	October 1, 2002
Last sequence update:	October 1, 2002
Last modified:	June 16, 2009
This is version 43 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)