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Unreviewed, UniProtKB/TrEMBL Q8LCQ9 (Q8LCQ9_ARATH)

Last modified June 16, 2009. Version 43. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Binary interactions · Sequences · References · Cross-references · Entry information

Names and origin

Protein namesSubmitted name:
    NADP-dependent malate dehydrogenase EMBL AAM63456.1
OrganismArabidopsis thaliana (Mouse-ear cress) EMBL AAM63456.1
Taxonomic identifier3702 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonscore eudicotyledonsrosidseurosids IIBrassicalesBrassicaceaeArabidopsis

Protein attributes

Sequence length441 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existenceEvidence at protein level.

General annotation (Comments)

Binary interactions

With

Entry

#Exp.

IntAct

Notes

TRX3Q424031EBI-449272,EBI-449157

Sequences

Sequence LengthMass (Da)Tools
Q8LCQ9-1 [UniParc].

Last modified October 1, 2002. Version 1.
Checksum: 8E629EDA96D815C1

FASTA44148,130
        10         20         30         40         50         60 
MAELSTPKTT SPFLNSSSRL RLSSKLHLSN HFRHLLLPPL HTTTPNSKIS CSVSQNSQAP 

        70         80         90        100        110        120 
VAVQENGLVK TKKECYGVFC LTYDLKAEEE TRSWKKLINI AVSGAAGMIS NHLLFKLASG 

       130        140        150        160        170        180 
EVFGPDQPIA LKLLGSERSI QALEGVAMEL EDSLFPLLRE VDIGTDPNEV FQDVEWAILI 

       190        200        210        220        230        240 
GAKPRGPGME RADLLDINGQ IFAEQGKALN KAASPNVKVL VVGNPCNTNA LICLKNAPNI 

       250        260        270        280        290        300 
PAKNFHALTR LDENRAKCQL ALKAGVFYDK VSNMTIWGNH STTQVPDFLN ARINGLPVKE 

       310        320        330        340        350        360 
VITDHKWLEE GFTESVQKRG GLLIQKWGRS SAASTAVSIV DAIKSLVTPT PEGDWFSTGV 

       370        380        390        400        410        420 
YTDGNPYGIE EGLVFSMLCR SKGDGDYELV KDVEIDDYLR QRIAKSEAEL LAEKRCVAHL 

       430        440 
TGEGIAYCDL GPVDTMLPGE V 

« Hide

References

[1]"Full-length messenger RNA sequences greatly improve genome annotation."
Haas B.J., Volfovsky N., Town C.D., Troukhan M., Alexandrov N., Feldmann K.A., Flavell R.B., White O., Salzberg S.L.
Genome Biol. 3:RESEARCH0029-RESEARCH0029(2002) [PubMed: 12093376] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
[2]"Features of Arabidopsis genes and genome discovered using full-length cDNAs."
Alexandrov N.A., Troukhan M.E., Brover V.V., Flavell R.B., Feldmann K.A.
Plant Mol. Biol. 60:71-87(2006)
Cited for: NUCLEOTIDE SEQUENCE.
[3]Brover V., Troukhan M., Alexandrov N., Lu Y.-P., Flavell R., Feldmann K.
Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.

Cross-references

Sequence databases

AY086453 mRNA. Translation: AAM63456.1.
IPIIPI00518845.

3D structure databases

HSSPHSSP built from PDB template 7MDH based on UniProtKB P17606.
SMRQ8LCQ9. Positions 72-438.
ModBaseSearch...

Protein-protein interaction databases

IntActQ8LCQ9. 1 interaction.

Family and domain databases

InterProIPR001236. Lactate/malate_DH.
IPR015955. Lactate_DH/Glyco_Ohase_4_C.
IPR001252. Malate_DH_AS.
IPR011273. Malate_DH_NADP-dep_pln.
IPR010945. Malate_DH_SF1.
IPR016040. NAD(P)-bd_dom.
[Graphical view]
Gene3DG3DSA:3.90.110.10. lact_mal_DH. 1 hit.
G3DSA:3.40.50.720. NAD(P)-bd. 1 hit.
PANTHERPTHR23382. MDH_SF1. 1 hit.
PfamPF02866. Ldh_1_C. 1 hit.
PF00056. Ldh_1_N. 1 hit.
[Graphical view]
ProDomPD003052. Mal_dehydrog. 1 hit.
[Graphical view] [Entries sharing at least one domain]
TIGRFAMsTIGR01757. Malate-DH_plant. 1 hit.
TIGR01759. MalateDH-SF1. 1 hit.
PROSITEPS00068. MDH. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ8LCQ9_ARATH
AccessionPrimary (citable) accession number: Q8LCQ9
Entry history
Integrated into UniProtKB/TrEMBL: October 1, 2002
Last sequence update: October 1, 2002
Last modified: June 16, 2009
This is version 43 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Binary interactions · Sequences · References · Cross-references · Entry information