Q8L9X2 (Q8L9X2_ARATH) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Chaperonin-like RbcX protein EMBL AED92757.1

Submitted name:
Putative uncharacterized protein At5g19855 EMBL AAO42050.1

Gene names

Ordered Locus Names:	At5g19855 TAIR At5g19855
ORF Names:	AT5G19855 EMBL AED92757.1

Organism

Arabidopsis thaliana (Mouse-ear cress) [Reference proteome] EMBL AAM65713.1

Taxonomic identifier

3702 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Viridiplantae › Streptophyta › Streptophytina › Embryophyta › Tracheophyta › Euphyllophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › malvids › Brassicales › Brassicaceae › Camelineae › Arabidopsis

Protein attributes

Sequence length	203 AA.
Sequence status	Complete.
Protein existence	Evidence at protein level

Ontologies

Keywords
Technical term	3D-structure PDB 4GR6 Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	chaperone-mediated protein folding Inferred from direct assay PubMed 21922322. Source: TAIR
Cellular_component	chloroplast stroma Inferred from direct assay PubMed 21922322. Source: TAIR
Molecular_function	protein binding involved in protein folding Inferred from direct assay PubMed 21922322. Source: TAIR
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q8L9X2 [UniParc]. Last modified October 1, 2002. Version 1. Checksum: C84E24AF978FCBA2	FASTA	203	23,476
	10 20 30 40 50 60 MVSAWFVVGS PVMDSSSSPC LCLDAHTTGT IRRKKILGKA RNLELGSSFT GSRIVFRLSP 70 80 90 100 110 120 KRVSRIANRK SKKLLIVNED VAGNYDDTFG DVQKQIVNYF TYKAVRTVLH QLYEMNPPQY 130 140 150 160 170 180 TWFYNHIITN RPTDGKRFLR ALGKESQELA ERVMITRLHL YGKWIKKCDH GKIYQEISDE 190 200 NLALMRERLM ETVIWPSDDT NSR

References

[1]	"Full-length messenger RNA sequences greatly improve genome annotation." Haas B.J., Volfovsky N., Town C.D., Troukhan M., Alexandrov N., Feldmann K.A., Flavell R.B., White O., Salzberg S.L. Genome Biol. 3:RESEARCH0029-RESEARCH0029(2002) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE.
[2]	Brover V., Troukhan M., Alexandrov N., Lu Y.-P., Flavell R., Feldmann K. Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.
[3]	"Arabidopsis Full Length cDNA Clones." Yamada K., Chan M.M., Chang C.H., Dale J.M., Hsuan V.W., Lee J.M., Onodera C.S., Quach H.L., Tang C., Toriumi M., Wong C., Wu H.C., Yu G., Yuan S., Carninci P., Chen H., Cheuk R., Hayashizaki Y. , Ishida J., Jones T., Kamiya A., Kawai J., Kim C.J., Narusaka M., Nguyen M., Palm C.J., Sakurai T., Satou M., Seki M., Shinn P., Southwick A., Tripp M.G., Wu T., Shinozaki K., Davis R.W., Ecker J.R., Theologis A. Submitted (FEB-2003) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.
[4]	"Arabidopsis Open Reading Frame (ORF) Clones." Yamada K., Chan M.M., Chang C.H., Dale J.M., Hsuan V.W., Lee J.M., Onodera C.S., Quach H.L., Tang C., Toriumi M., Wong C., Wu H.C., Yu G., Yuan S., Carninci P., Chen H., Cheuk R., Hayashizaki Y. , Ishida J., Jones T., Kamiya A., Kawai J., Kim C.J., Narusaka M., Nguyen M., Palm C.J., Sakurai T., Satou M., Seki M., Shinn P., Southwick A., Tripp M.G., Wu T., Shinozaki K., Davis R.W., Ecker J.R., Theologis A. Submitted (MAR-2003) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.
[5]	"Features of Arabidopsis genes and genome discovered using full-length cDNAs." Alexandrov N.A., Troukhan M.E., Brover V.V., Flavell R.B., Feldmann K.A. Plant Mol. Biol. 60:71-87(2006) Cited for: NUCLEOTIDE SEQUENCE.
[6]	The Arabidopsis Information Resource (TAIR) Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases Cited for: GENOME REANNOTATION. Strain: cv. Columbia.
[7]	"Insights into eukaryotic Rubisco assembly - Crystal structures of RbcX chaperones from Arabidopsis thaliana." Kolesinski P., Golik P., Grudnik P., Piechota J., Markiewicz M., Tarnawski M., Dubin G., Szczepaniak A. Biochim. Biophys. Acta 1830:2899-2906(2013) [PubMed] [Europe PMC] [Abstract] Cited for: X-RAY CRYSTALLOGRAPHY (2.00 ANGSTROMS) OF 79-203.
+	Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ

AY088169 mRNA. Translation: AAM65713.1.
BT004014 mRNA. Translation: AAO42050.1.
BT005149 mRNA. Translation: AAO50682.1.
CP002688 Genomic DNA. Translation: AED92757.1.

IPI

IPI00527508.

RefSeq

NP_568382.1. NM_121991.3.

UniGene

At.31246.

3D structure databases

PDBe
RCSB PDB
PDBj

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
4GR6	X-ray	2.00	A/B	79-203	[»]

SMR

Q8L9X2. Positions 94-193.

ModBase

Search...

Protein-protein interaction databases

STRING

3702.AT5G19855.1-P.

Protocols and materials databases

StructuralBiologyKnowledgebase

Search...

Genome annotation databases

EnsemblPlants

AT5G19855.1; AT5G19855.1; AT5G19855.

GeneID

832106.

KEGG

ath:AT5G19855.

Organism-specific databases

TAIR

At5g19855.

Phylogenomic databases

eggNOG

NOG14198.

HOGENOM

HOG000240504.

InParanoid

Q8L9X2.

OMA

HIITNRP.

ProtClustDB

CLSN2713656.

Gene expression databases

Genevestigator

Q8L9X2.

Family and domain databases

InterPro

IPR003435. Chaperonin_RcbX.
[Graphical view]

Pfam

PF02341. RcbX. 1 hit.
[Graphical view]

ProtoNet

Search...

Entry information

Entry name

Q8L9X2_ARATH

Accession

Primary (citable) accession number: Q8L9X2

Entry history

Integrated into UniProtKB/TrEMBL:	October 1, 2002
Last sequence update:	October 1, 2002
Last modified:	May 1, 2013
This is version 54 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)