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Q8L9X2

- Q8L9X2_ARATH

UniProt

Q8L9X2 - Q8L9X2_ARATH

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Protein
Submitted name:

Chaperonin-like RbcX protein

Gene

At5g19855

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  1. protein binding involved in protein folding Source: TAIR

GO - Biological processi

  1. chaperone-mediated protein folding Source: TAIR
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Chaperonin-like RbcX proteinImported
Submitted name:
Putative uncharacterized protein At5g19855Imported
Gene namesi
Ordered Locus Names:At5g19855Imported
OrganismiArabidopsis thaliana (Mouse-ear cress)Imported
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
ProteomesiUP000006548: Chromosome 5

Organism-specific databases

TAIRiAT5G19855.

Subcellular locationi

GO - Cellular componenti

  1. chloroplast stroma Source: TAIR
Complete GO annotation...

Expressioni

Gene expression databases

GenevestigatoriQ8L9X2.

Interactioni

Protein-protein interaction databases

STRINGi3702.AT5G19855.1-P.

Structurei

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
4GR6X-ray2.00A/B79-203[»]
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiNOG14198.
HOGENOMiHOG000240504.
OMAiHIITNRP.

Family and domain databases

InterProiIPR003435. Chaperonin_RcbX.
[Graphical view]
PfamiPF02341. RcbX. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q8L9X2-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MVSAWFVVGS PVMDSSSSPC LCLDAHTTGT IRRKKILGKA RNLELGSSFT
60 70 80 90 100
GSRIVFRLSP KRVSRIANRK SKKLLIVNED VAGNYDDTFG DVQKQIVNYF
110 120 130 140 150
TYKAVRTVLH QLYEMNPPQY TWFYNHIITN RPTDGKRFLR ALGKESQELA
160 170 180 190 200
ERVMITRLHL YGKWIKKCDH GKIYQEISDE NLALMRERLM ETVIWPSDDT

NSR
Length:203
Mass (Da):23,476
Last modified:October 1, 2002 - v1
Checksum:iC84E24AF978FCBA2
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AY088169 mRNA. Translation: AAM65713.1.
BT004014 mRNA. Translation: AAO42050.1.
BT005149 mRNA. Translation: AAO50682.1.
CP002688 Genomic DNA. Translation: AED92757.1.
RefSeqiNP_568382.1. NM_121991.3.
UniGeneiAt.31246.

Genome annotation databases

EnsemblPlantsiAT5G19855.1; AT5G19855.1; AT5G19855.
GeneIDi832106.
KEGGiath:AT5G19855.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AY088169 mRNA. Translation: AAM65713.1 .
BT004014 mRNA. Translation: AAO42050.1 .
BT005149 mRNA. Translation: AAO50682.1 .
CP002688 Genomic DNA. Translation: AED92757.1 .
RefSeqi NP_568382.1. NM_121991.3.
UniGenei At.31246.

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
4GR6 X-ray 2.00 A/B 79-203 [» ]
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 3702.AT5G19855.1-P.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblPlantsi AT5G19855.1 ; AT5G19855.1 ; AT5G19855 .
GeneIDi 832106.
KEGGi ath:AT5G19855.

Organism-specific databases

TAIRi AT5G19855.

Phylogenomic databases

eggNOGi NOG14198.
HOGENOMi HOG000240504.
OMAi HIITNRP.

Gene expression databases

Genevestigatori Q8L9X2.

Family and domain databases

InterProi IPR003435. Chaperonin_RcbX.
[Graphical view ]
Pfami PF02341. RcbX. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana."
    Kazusa DNA Research Institute, Cold Spring Harbor and Washington University in St Louis Sequencing Consortium, European Union Arabidopsis Genome Sequencing Consortium
    Tabata S., Kaneko T., Nakamura Y., Kotani H., Kato T., Asamizu E., Miyajima N., Sasamoto S., Kimura T., Hosouchi T., Kawashima K., Kohara M., Matsumoto M., Matsuno A., Muraki A., Nakayama S., Nakazaki N., Naruo K.
    , Okumura S., Shinpo S., Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Sato S., de la Bastide M., Huang E., Spiegel L., Gnoj L., O'Shaughnessy A., Preston R., Habermann K., Murray J., Johnson D., Rohlfing T., Nelson J., Stoneking T., Pepin K., Spieth J., Sekhon M., Armstrong J., Becker M., Belter E., Cordum H., Cordes M., Courtney L., Courtney W., Dante M., Du H., Edwards J., Fryman J., Haakensen B., Lamar E., Latreille P., Leonard S., Meyer R., Mulvaney E., Ozersky P., Riley A., Strowmatt C., Wagner-McPherson C., Wollam A., Yoakum M., Bell M., Dedhia N., Parnell L., Shah R., Rodriguez M., Hoon See L., Vil D., Baker J., Kirchoff K., Toth K., King L., Bahret A., Miller B., Marra M.A., Martienssen R., McCombie W.R., Wilson R.K., Murphy G., Bancroft I., Volckaert G., Wambutt R., Duesterhoeft A., Stiekema W., Pohl T., Entian K.-D., Terryn N., Hartley N., Bent E., Johnson S., Langham S.-A., McCullagh B., Robben J., Grymonprez B., Zimmermann W., Ramsperger U., Wedler H., Balke K., Wedler E., Peters S., van Staveren M., Dirkse W., Mooijman P., Klein Lankhorst R., Weitzenegger T., Bothe G., Rose M., Hauf J., Berneiser S., Hempel S., Feldpausch M., Lamberth S., Villarroel R., Gielen J., Ardiles W., Bents O., Lemcke K., Kolesov G., Mayer K.F.X., Rudd S., Schoof H., Schueller C., Zaccaria P., Mewes H.-W., Bevan M., Fransz P.F.
    Nature 408:823-826(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. ColumbiaImported.
  2. "Full-length messenger RNA sequences greatly improve genome annotation."
    Haas B.J., Volfovsky N., Town C.D., Troukhan M., Alexandrov N., Feldmann K.A., Flavell R.B., White O., Salzberg S.L.
    Genome Biol. 3:RESEARCH0029-RESEARCH0029(2002) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
  3. Brover V., Troukhan M., Alexandrov N., Lu Y.-P., Flavell R., Feldmann K.
    Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
  4. Cited for: NUCLEOTIDE SEQUENCE.
  5. Cited for: NUCLEOTIDE SEQUENCE.
  6. "Features of Arabidopsis genes and genome discovered using full-length cDNAs."
    Alexandrov N.A., Troukhan M.E., Brover V.V., Flavell R.B., Feldmann K.A.
    Plant Mol. Biol. 60:71-87(2006)
    Cited for: NUCLEOTIDE SEQUENCE.
  7. TAIR
    Swarbreck D., Lamesch P., Wilks C., Huala E.
    Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
  8. The Arabidopsis Information Resource (TAIR)
    Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: GENOME REANNOTATION.
    Strain: cv. ColumbiaImported.
  9. "Insights into eukaryotic Rubisco assembly - crystal structures of RbcX chaperones from Arabidopsis thaliana."
    Kolesinski P., Golik P., Grudnik P., Piechota J., Markiewicz M., Tarnawski M., Dubin G., Szczepaniak A.
    Biochim. Biophys. Acta 1830:2899-2906(2013) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (2.00 ANGSTROMS) OF 79-203.

Entry informationi

Entry nameiQ8L9X2_ARATH
AccessioniPrimary (citable) accession number: Q8L9X2
Entry historyi
Integrated into UniProtKB/TrEMBL: October 1, 2002
Last sequence update: October 1, 2002
Last modified: October 29, 2014
This is version 66 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureImported, Complete proteome, Reference proteomeImported

External Data

Dasty 3