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Q8L9X2 (Q8L9X2_ARATH) Unreviewed, UniProtKB/TrEMBL

Last modified March 19, 2014. Version 62. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names

Putative uncharacterized protein At5g19855 EMBL AAO42050.1
Gene names
Ordered Locus Names:AT5G19855 EMBL AED92757.1
OrganismArabidopsis thaliana (Mouse-ear cress) [Reference proteome] EMBL AAM65713.1
Taxonomic identifier3702 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis

Protein attributes

Sequence length203 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

Sequences

Sequence LengthMass (Da)Tools
Q8L9X2 [UniParc].

Last modified October 1, 2002. Version 1.
Checksum: C84E24AF978FCBA2

FASTA20323,476
        10         20         30         40         50         60 
MVSAWFVVGS PVMDSSSSPC LCLDAHTTGT IRRKKILGKA RNLELGSSFT GSRIVFRLSP 

        70         80         90        100        110        120 
KRVSRIANRK SKKLLIVNED VAGNYDDTFG DVQKQIVNYF TYKAVRTVLH QLYEMNPPQY 

       130        140        150        160        170        180 
TWFYNHIITN RPTDGKRFLR ALGKESQELA ERVMITRLHL YGKWIKKCDH GKIYQEISDE 

       190        200 
NLALMRERLM ETVIWPSDDT NSR 

« Hide

References

[1]"Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana."
Kazusa DNA Research Institute, Cold Spring Harbor and Washington University in St Louis Sequencing Consortium, European Union Arabidopsis Genome Sequencing Consortium
Tabata S., Kaneko T., Nakamura Y., Kotani H., Kato T., Asamizu E., Miyajima N., Sasamoto S., Kimura T., Hosouchi T., Kawashima K., Kohara M., Matsumoto M., Matsuno A., Muraki A., Nakayama S., Nakazaki N., Naruo K. expand/collapse author list , Okumura S., Shinpo S., Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Sato S., de la Bastide M., Huang E., Spiegel L., Gnoj L., O'Shaughnessy A., Preston R., Habermann K., Murray J., Johnson D., Rohlfing T., Nelson J., Stoneking T., Pepin K., Spieth J., Sekhon M., Armstrong J., Becker M., Belter E., Cordum H., Cordes M., Courtney L., Courtney W., Dante M., Du H., Edwards J., Fryman J., Haakensen B., Lamar E., Latreille P., Leonard S., Meyer R., Mulvaney E., Ozersky P., Riley A., Strowmatt C., Wagner-McPherson C., Wollam A., Yoakum M., Bell M., Dedhia N., Parnell L., Shah R., Rodriguez M., See L.H., Vil D., Baker J., Kirchoff K., Toth K., King L., Bahret A., Miller B., Marra M., Martienssen R., McCombie W.R., Wilson R.K., Murphy G., Bancroft I., Volckaert G., Wambutt R., Dusterhoft A., Stiekema W., Pohl T., Entian K.D., Terryn N., Hartley N., Bent E., Johnson S., Langham S.A., McCullagh B., Robben J., Grymonprez B., Zimmermann W., Ramsperger U., Wedler H., Balke K., Wedler E., Peters S., van Staveren M., Dirkse W., Mooijman P., Lankhorst R.K., Weitzenegger T., Bothe G., Rose M., Hauf J., Berneiser S., Hempel S., Feldpausch M., Lamberth S., Villarroel R., Gielen J., Ardiles W., Bents O., Lemcke K., Kolesov G., Mayer K., Rudd S., Schoof H., Schueller C., Zaccaria P., Mewes H.W., Bevan M., Fransz P.
Nature 408:823-826(2000) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
[2]"Full-length messenger RNA sequences greatly improve genome annotation."
Haas B.J., Volfovsky N., Town C.D., Troukhan M., Alexandrov N., Feldmann K.A., Flavell R.B., White O., Salzberg S.L.
Genome Biol. 3:RESEARCH0029-RESEARCH0029(2002) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
[3]Brover V., Troukhan M., Alexandrov N., Lu Y.-P., Flavell R., Feldmann K.
Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[4]"Arabidopsis Full Length cDNA Clones."
Yamada K., Chan M.M., Chang C.H., Dale J.M., Hsuan V.W., Lee J.M., Onodera C.S., Quach H.L., Tang C., Toriumi M., Wong C., Wu H.C., Yu G., Yuan S., Carninci P., Chen H., Cheuk R., Hayashizaki Y. expand/collapse author list , Ishida J., Jones T., Kamiya A., Kawai J., Kim C.J., Narusaka M., Nguyen M., Palm C.J., Sakurai T., Satou M., Seki M., Shinn P., Southwick A., Tripp M.G., Wu T., Shinozaki K., Davis R.W., Ecker J.R., Theologis A.
Submitted (FEB-2003) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[5]"Arabidopsis Open Reading Frame (ORF) Clones."
Yamada K., Chan M.M., Chang C.H., Dale J.M., Hsuan V.W., Lee J.M., Onodera C.S., Quach H.L., Tang C., Toriumi M., Wong C., Wu H.C., Yu G., Yuan S., Carninci P., Chen H., Cheuk R., Hayashizaki Y. expand/collapse author list , Ishida J., Jones T., Kamiya A., Kawai J., Kim C.J., Narusaka M., Nguyen M., Palm C.J., Sakurai T., Satou M., Seki M., Shinn P., Southwick A., Tripp M.G., Wu T., Shinozaki K., Davis R.W., Ecker J.R., Theologis A.
Submitted (MAR-2003) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[6]"Features of Arabidopsis genes and genome discovered using full-length cDNAs."
Alexandrov N.A., Troukhan M.E., Brover V.V., Flavell R.B., Feldmann K.A.
Plant Mol. Biol. 60:71-87(2006)
Cited for: NUCLEOTIDE SEQUENCE.
[7]TAIR
Swarbreck D., Lamesch P., Wilks C., Huala E.
Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[8]The Arabidopsis Information Resource (TAIR)
Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
Cited for: GENOME REANNOTATION.
Strain: cv. Columbia.
[9]"Insights into eukaryotic Rubisco assembly - crystal structures of RbcX chaperones from Arabidopsis thaliana."
Kolesinski P., Golik P., Grudnik P., Piechota J., Markiewicz M., Tarnawski M., Dubin G., Szczepaniak A.
Biochim. Biophys. Acta 1830:2899-2906(2013) [PubMed] [Europe PMC] [Abstract]
Cited for: X-RAY CRYSTALLOGRAPHY (2.00 ANGSTROMS) OF 79-203.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AY088169 mRNA. Translation: AAM65713.1.
BT004014 mRNA. Translation: AAO42050.1.
BT005149 mRNA. Translation: AAO50682.1.
CP002688 Genomic DNA. Translation: AED92757.1.
RefSeqNP_568382.1. NM_121991.3.
UniGeneAt.31246.

3D structure databases

PDBe
RCSB PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
4GR6X-ray2.00A/B79-203[»]
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING3702.AT5G19855.1-P.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsAT5G19855.1; AT5G19855.1; AT5G19855.
GeneID832106.
KEGGath:AT5G19855.

Organism-specific databases

TAIRAt5g19855.

Phylogenomic databases

eggNOGNOG14198.
HOGENOMHOG000240504.
InParanoidQ8L9X2.
OMAHIITNRP.
ProtClustDBCLSN2713656.

Gene expression databases

GenevestigatorQ8L9X2.

Family and domain databases

InterProIPR003435. Chaperonin_RcbX.
[Graphical view]
PfamPF02341. RcbX. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ8L9X2_ARATH
AccessionPrimary (citable) accession number: Q8L9X2
Entry history
Integrated into UniProtKB/TrEMBL: October 1, 2002
Last sequence update: October 1, 2002
Last modified: March 19, 2014
This is version 62 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)