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Q8L9X2

- Q8L9X2_ARATH

UniProt

Q8L9X2 - Q8L9X2_ARATH

Protein
Submitted name:

Chaperonin-like RbcX protein

Gene

At5g19855

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli
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    • History
      Entry version 65 (01 Oct 2014)
      Sequence version 1 (01 Oct 2002)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. protein binding involved in protein folding Source: TAIR

    GO - Biological processi

    1. chaperone-mediated protein folding Source: TAIR

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Chaperonin-like RbcX proteinImported
    Submitted name:
    Putative uncharacterized protein At5g19855Imported
    Gene namesi
    Ordered Locus Names:At5g19855Imported
    OrganismiArabidopsis thaliana (Mouse-ear cress)Imported
    Taxonomic identifieri3702 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
    ProteomesiUP000006548: Chromosome 5

    Organism-specific databases

    TAIRiAT5G19855.

    Subcellular locationi

    GO - Cellular componenti

    1. chloroplast stroma Source: TAIR

    Expressioni

    Gene expression databases

    GenevestigatoriQ8L9X2.

    Interactioni

    Protein-protein interaction databases

    STRINGi3702.AT5G19855.1-P.

    Structurei

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    4GR6X-ray2.00A/B79-203[»]
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiNOG14198.
    HOGENOMiHOG000240504.
    InParanoidiQ8L9X2.
    OMAiHIITNRP.

    Family and domain databases

    InterProiIPR003435. Chaperonin_RcbX.
    [Graphical view]
    PfamiPF02341. RcbX. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q8L9X2-1 [UniParc]FASTAAdd to Basket

    « Hide

    MVSAWFVVGS PVMDSSSSPC LCLDAHTTGT IRRKKILGKA RNLELGSSFT    50
    GSRIVFRLSP KRVSRIANRK SKKLLIVNED VAGNYDDTFG DVQKQIVNYF 100
    TYKAVRTVLH QLYEMNPPQY TWFYNHIITN RPTDGKRFLR ALGKESQELA 150
    ERVMITRLHL YGKWIKKCDH GKIYQEISDE NLALMRERLM ETVIWPSDDT 200
    NSR 203
    Length:203
    Mass (Da):23,476
    Last modified:October 1, 2002 - v1
    Checksum:iC84E24AF978FCBA2
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AY088169 mRNA. Translation: AAM65713.1.
    BT004014 mRNA. Translation: AAO42050.1.
    BT005149 mRNA. Translation: AAO50682.1.
    CP002688 Genomic DNA. Translation: AED92757.1.
    RefSeqiNP_568382.1. NM_121991.3.
    UniGeneiAt.31246.

    Genome annotation databases

    EnsemblPlantsiAT5G19855.1; AT5G19855.1; AT5G19855.
    GeneIDi832106.
    KEGGiath:AT5G19855.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AY088169 mRNA. Translation: AAM65713.1 .
    BT004014 mRNA. Translation: AAO42050.1 .
    BT005149 mRNA. Translation: AAO50682.1 .
    CP002688 Genomic DNA. Translation: AED92757.1 .
    RefSeqi NP_568382.1. NM_121991.3.
    UniGenei At.31246.

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    4GR6 X-ray 2.00 A/B 79-203 [» ]
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 3702.AT5G19855.1-P.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblPlantsi AT5G19855.1 ; AT5G19855.1 ; AT5G19855 .
    GeneIDi 832106.
    KEGGi ath:AT5G19855.

    Organism-specific databases

    TAIRi AT5G19855.

    Phylogenomic databases

    eggNOGi NOG14198.
    HOGENOMi HOG000240504.
    InParanoidi Q8L9X2.
    OMAi HIITNRP.

    Gene expression databases

    Genevestigatori Q8L9X2.

    Family and domain databases

    InterProi IPR003435. Chaperonin_RcbX.
    [Graphical view ]
    Pfami PF02341. RcbX. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana."
      Kazusa DNA Research Institute, Cold Spring Harbor and Washington University in St Louis Sequencing Consortium, European Union Arabidopsis Genome Sequencing Consortium
      Tabata S., Kaneko T., Nakamura Y., Kotani H., Kato T., Asamizu E., Miyajima N., Sasamoto S., Kimura T., Hosouchi T., Kawashima K., Kohara M., Matsumoto M., Matsuno A., Muraki A., Nakayama S., Nakazaki N., Naruo K.
      , Okumura S., Shinpo S., Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Sato S., de la Bastide M., Huang E., Spiegel L., Gnoj L., O'Shaughnessy A., Preston R., Habermann K., Murray J., Johnson D., Rohlfing T., Nelson J., Stoneking T., Pepin K., Spieth J., Sekhon M., Armstrong J., Becker M., Belter E., Cordum H., Cordes M., Courtney L., Courtney W., Dante M., Du H., Edwards J., Fryman J., Haakensen B., Lamar E., Latreille P., Leonard S., Meyer R., Mulvaney E., Ozersky P., Riley A., Strowmatt C., Wagner-McPherson C., Wollam A., Yoakum M., Bell M., Dedhia N., Parnell L., Shah R., Rodriguez M., Hoon See L., Vil D., Baker J., Kirchoff K., Toth K., King L., Bahret A., Miller B., Marra M.A., Martienssen R., McCombie W.R., Wilson R.K., Murphy G., Bancroft I., Volckaert G., Wambutt R., Duesterhoeft A., Stiekema W., Pohl T., Entian K.-D., Terryn N., Hartley N., Bent E., Johnson S., Langham S.-A., McCullagh B., Robben J., Grymonprez B., Zimmermann W., Ramsperger U., Wedler H., Balke K., Wedler E., Peters S., van Staveren M., Dirkse W., Mooijman P., Klein Lankhorst R., Weitzenegger T., Bothe G., Rose M., Hauf J., Berneiser S., Hempel S., Feldpausch M., Lamberth S., Villarroel R., Gielen J., Ardiles W., Bents O., Lemcke K., Kolesov G., Mayer K.F.X., Rudd S., Schoof H., Schueller C., Zaccaria P., Mewes H.-W., Bevan M., Fransz P.F.
      Nature 408:823-826(2000) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. ColumbiaImported.
    2. "Full-length messenger RNA sequences greatly improve genome annotation."
      Haas B.J., Volfovsky N., Town C.D., Troukhan M., Alexandrov N., Feldmann K.A., Flavell R.B., White O., Salzberg S.L.
      Genome Biol. 3:RESEARCH0029-RESEARCH0029(2002) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
    3. Brover V., Troukhan M., Alexandrov N., Lu Y.-P., Flavell R., Feldmann K.
      Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
    4. Cited for: NUCLEOTIDE SEQUENCE.
    5. Cited for: NUCLEOTIDE SEQUENCE.
    6. "Features of Arabidopsis genes and genome discovered using full-length cDNAs."
      Alexandrov N.A., Troukhan M.E., Brover V.V., Flavell R.B., Feldmann K.A.
      Plant Mol. Biol. 60:71-87(2006)
      Cited for: NUCLEOTIDE SEQUENCE.
    7. TAIR
      Swarbreck D., Lamesch P., Wilks C., Huala E.
      Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
    8. The Arabidopsis Information Resource (TAIR)
      Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
      Cited for: GENOME REANNOTATION.
      Strain: cv. ColumbiaImported.
    9. "Insights into eukaryotic Rubisco assembly - crystal structures of RbcX chaperones from Arabidopsis thaliana."
      Kolesinski P., Golik P., Grudnik P., Piechota J., Markiewicz M., Tarnawski M., Dubin G., Szczepaniak A.
      Biochim. Biophys. Acta 1830:2899-2906(2013) [PubMed] [Europe PMC] [Abstract]
      Cited for: X-RAY CRYSTALLOGRAPHY (2.00 ANGSTROMS) OF 79-203.

    Entry informationi

    Entry nameiQ8L9X2_ARATH
    AccessioniPrimary (citable) accession number: Q8L9X2
    Entry historyi
    Integrated into UniProtKB/TrEMBL: October 1, 2002
    Last sequence update: October 1, 2002
    Last modified: October 1, 2014
    This is version 65 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    3D-structureImported, Complete proteome, Reference proteomeImported

    External Data

    Dasty 3