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Protein
Submitted name:

Putative uncharacterized protein

Gene
N/A
Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Submitted name:
Putative uncharacterized proteinImported
OrganismiArabidopsis thaliana (Mouse-ear cress)Imported
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis

PTM / Processingi

Proteomic databases

PaxDbiQ8L9M6.

Interactioni

Protein-protein interaction databases

STRINGi3702.AT3G53980.1.

Structurei

3D structure databases

ProteinModelPortaliQ8L9M6.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiNOG285422.

Family and domain databases

InterProiIPR016140. Bifunc_inhib/LTP/seed_store.
[Graphical view]
PfamiPF14368. LTP_2. 1 hit.
[Graphical view]
SMARTiSM00499. AAI. 1 hit.
[Graphical view]
SUPFAMiSSF47699. SSF47699. 1 hit.

Sequencei

Sequence statusi: Complete.

Q8L9M6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKFLCILGLI LLIGTVVDGA GECGRSSPDN EAMKLAPCAG AAQDANSAVP
60 70 80 90 100
GGCCTQIKRF SQNPKCLCAI LLSDTAKASG VDPEVALTIP KRCNFANRPV
110
GYKCGAYTLP
Length:110
Mass (Da):11,362
Last modified:October 1, 2002 - v1
Checksum:i8E0B9513C5C7F2F1
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY088350 mRNA. Translation: AAM65889.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY088350 mRNA. Translation: AAM65889.1.

3D structure databases

ProteinModelPortaliQ8L9M6.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi3702.AT3G53980.1.

Proteomic databases

PaxDbiQ8L9M6.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Phylogenomic databases

eggNOGiNOG285422.

Family and domain databases

InterProiIPR016140. Bifunc_inhib/LTP/seed_store.
[Graphical view]
PfamiPF14368. LTP_2. 1 hit.
[Graphical view]
SMARTiSM00499. AAI. 1 hit.
[Graphical view]
SUPFAMiSSF47699. SSF47699. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Full-length messenger RNA sequences greatly improve genome annotation."
    Haas B.J., Volfovsky N., Town C.D., Troukhan M., Alexandrov N., Feldmann K.A., Flavell R.B., White O., Salzberg S.L.
    Genome Biol. 3:RESEARCH0029-RESEARCH0029(2002) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
  2. Brover V., Troukhan M., Alexandrov N., Lu Y.-P., Flavell R., Feldmann K.
    Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
  3. "Features of Arabidopsis genes and genome discovered using full-length cDNAs."
    Alexandrov N.A., Troukhan M.E., Brover V.V., Flavell R.B., Feldmann K.A.
    Plant Mol. Biol. 60:71-87(2006)
    Cited for: NUCLEOTIDE SEQUENCE.

Entry informationi

Entry nameiQ8L9M6_ARATH
AccessioniPrimary (citable) accession number: Q8L9M6
Entry historyi
Integrated into UniProtKB/TrEMBL: October 1, 2002
Last sequence update: October 1, 2002
Last modified: June 24, 2015
This is version 53 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.