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Protein

Probable carbohydrate esterase At4g34215

Gene

At4g34215

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Active sitei311
Active sitei2351
Active sitei2381

GO - Molecular functioni

  • hydrolase activity Source: TAIR
Complete GO annotation...

Keywords - Molecular functioni

Hydrolase

Names & Taxonomyi

Protein namesi
Recommended name:
Probable carbohydrate esterase At4g34215 (EC:3.1.-.-)
Gene namesi
Ordered Locus Names:At4g34215
ORF Names:F10M10.12, F28A23_20
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 4

Organism-specific databases

TAIRiAT4G34215.

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002384631 – 260Probable carbohydrate esterase At4g34215Add BLAST260

Proteomic databases

PaxDbiQ8L9J9.

Expressioni

Gene expression databases

GenevisibleiQ8L9J9. AT.

Structurei

Secondary structure

1260
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Beta strandi22 – 30Combined sources9
Helixi31 – 34Combined sources4
Beta strandi39 – 41Combined sources3
Turni43 – 45Combined sources3
Beta strandi48 – 50Combined sources3
Helixi56 – 58Combined sources3
Beta strandi64 – 67Combined sources4
Beta strandi73 – 75Combined sources3
Turni80 – 84Combined sources5
Helixi95 – 106Combined sources12
Beta strandi113 – 117Combined sources5
Helixi125 – 128Combined sources4
Helixi133 – 145Combined sources13
Helixi146 – 148Combined sources3
Beta strandi151 – 158Combined sources8
Helixi161 – 163Combined sources3
Beta strandi164 – 166Combined sources3
Helixi167 – 187Combined sources21
Beta strandi195 – 199Combined sources5
Helixi207 – 216Combined sources10
Beta strandi222 – 226Combined sources5
Beta strandi236 – 239Combined sources4
Helixi241 – 259Combined sources19

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2APJX-ray1.60A/B/C/D1-260[»]
ProteinModelPortaliQ8L9J9.
SMRiQ8L9J9.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ8L9J9.

Family & Domainsi

Sequence similaritiesi

Belongs to the carbohydrate esterase 6 family.Curated

Phylogenomic databases

eggNOGiENOG410IJPQ. Eukaryota.
ENOG4111I8E. LUCA.
HOGENOMiHOG000240574.
OMAiTTKTCGV.
OrthoDBiEOG09360ITS.
PhylomeDBiQ8L9J9.

Family and domain databases

InterProiIPR005181. SASA.
IPR013830. SGNH_hydro.
[Graphical view]
PfamiPF03629. SASA. 1 hit.
[Graphical view]
SUPFAMiSSF52266. SSF52266. 1 hit.

Sequencei

Sequence statusi: Complete.

Q8L9J9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEGGSITPGE DKPEIQSPIP PNQIFILSGQ SNMAGRGGVF KDHHNNRWVW
60 70 80 90 100
DKILPPECAP NSSILRLSAD LRWEEAHEPL HVDIDTGKVC GVGPGMAFAN
110 120 130 140 150
AVKNRLETDS AVIGLVPCAS GGTAIKEWER GSHLYERMVK RTEESRKCGG
160 170 180 190 200
EIKAVLWYQG ESDVLDIHDA ESYGNNMDRL IKNLRHDLNL PSLPIIQVAI
210 220 230 240 250
ASGGGYIDKV REAQLGLKLS NVVCVDAKGL PLKSDNLHLT TEAQVQLGLS
260
LAQAYLSNFC
Length:260
Mass (Da):28,358
Last modified:May 30, 2006 - v2
Checksum:i90712C57F871C742
GO

Sequence cautioni

The sequence CAA17550 differs from that shown. Reason: Erroneous gene model prediction. The predicted gene At4g34220 has been split into 2 genes: At4g34215 and At4g34220.Curated
The sequence CAB80139 differs from that shown. Reason: Erroneous gene model prediction. The predicted gene At4g34220 has been split into 2 genes: At4g34215 and At4g34220.Curated

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sequence conflicti4G → E in AAM65927 (Ref. 3) Curated1
Sequence conflicti8P → S in AAM65927 (Ref. 3) Curated1
Sequence conflicti40F → V in AAM65927 (Ref. 3) Curated1
Sequence conflicti45N → H in AAM65927 (Ref. 3) Curated1
Sequence conflicti106L → V in AAM65927 (Ref. 3) Curated1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL021961 Genomic DNA. Translation: CAA17550.1. Sequence problems.
AL161585 Genomic DNA. Translation: CAB80139.1. Sequence problems.
CP002687 Genomic DNA. Translation: AEE86341.1.
CP002687 Genomic DNA. Translation: AEE86342.1.
AY088389 mRNA. Translation: AAM65927.1.
PIRiT05414.
RefSeqiNP_567960.1. NM_119585.2.
NP_849493.1. NM_179162.4.
UniGeneiAt.27025.

Genome annotation databases

EnsemblPlantsiAT4G34215.1; AT4G34215.1; AT4G34215.
AT4G34215.2; AT4G34215.2; AT4G34215.
GeneIDi829570.
GrameneiAT4G34215.1; AT4G34215.1; AT4G34215.
AT4G34215.2; AT4G34215.2; AT4G34215.
KEGGiath:AT4G34215.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL021961 Genomic DNA. Translation: CAA17550.1. Sequence problems.
AL161585 Genomic DNA. Translation: CAB80139.1. Sequence problems.
CP002687 Genomic DNA. Translation: AEE86341.1.
CP002687 Genomic DNA. Translation: AEE86342.1.
AY088389 mRNA. Translation: AAM65927.1.
PIRiT05414.
RefSeqiNP_567960.1. NM_119585.2.
NP_849493.1. NM_179162.4.
UniGeneiAt.27025.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2APJX-ray1.60A/B/C/D1-260[»]
ProteinModelPortaliQ8L9J9.
SMRiQ8L9J9.
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

PaxDbiQ8L9J9.

Protocols and materials databases

DNASUi829570.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiAT4G34215.1; AT4G34215.1; AT4G34215.
AT4G34215.2; AT4G34215.2; AT4G34215.
GeneIDi829570.
GrameneiAT4G34215.1; AT4G34215.1; AT4G34215.
AT4G34215.2; AT4G34215.2; AT4G34215.
KEGGiath:AT4G34215.

Organism-specific databases

TAIRiAT4G34215.

Phylogenomic databases

eggNOGiENOG410IJPQ. Eukaryota.
ENOG4111I8E. LUCA.
HOGENOMiHOG000240574.
OMAiTTKTCGV.
OrthoDBiEOG09360ITS.
PhylomeDBiQ8L9J9.

Miscellaneous databases

EvolutionaryTraceiQ8L9J9.
PROiQ8L9J9.

Gene expression databases

GenevisibleiQ8L9J9. AT.

Family and domain databases

InterProiIPR005181. SASA.
IPR013830. SGNH_hydro.
[Graphical view]
PfamiPF03629. SASA. 1 hit.
[Graphical view]
SUPFAMiSSF52266. SSF52266. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiCAES_ARATH
AccessioniPrimary (citable) accession number: Q8L9J9
Secondary accession number(s): O49483
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 30, 2006
Last sequence update: May 30, 2006
Last modified: November 30, 2016
This is version 86 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  3. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.