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Q8L7W3

- Q8L7W3_ARATH

UniProt

Q8L7W3 - Q8L7W3_ARATH

Protein
Submitted name:

At2g29210/F16P2.41

Gene

At2g29210

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli
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    • History
      Entry version 79 (01 Oct 2014)
      Sequence version 1 (01 Oct 2002)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. protein binding Source: IntAct

    GO - Biological processi

    1. mRNA processing Source: InterPro
    2. RNA splicing Source: TAIR

    Enzyme and pathway databases

    ReactomeiREACT_180054. mRNA Splicing - Major Pathway.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    At2g29210/F16P2.41Imported
    Submitted name:
    Serine/arginine repetitive matrix protein 1-like proteinImported
    Gene namesi
    Ordered Locus Names:At2g29210Imported
    OrganismiArabidopsis thaliana (Mouse-ear cress)Imported
    Taxonomic identifieri3702 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
    ProteomesiUP000006548: Chromosome 2

    Organism-specific databases

    TAIRiAT2G29210.

    Expressioni

    Gene expression databases

    GenevestigatoriQ8L7W3.

    Interactioni

    Binary interactionsi

    WithEntry#Exp.IntActNotes
    At4g33690Q6NPE92EBI-4430408,EBI-4430370

    Protein-protein interaction databases

    STRINGi3702.AT2G29210.1-P.

    Structurei

    3D structure databases

    SMRiQ8L7W3. Positions 29-133.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiNOG242213.
    HOGENOMiHOG000148632.
    InParanoidiQ8L7W3.
    KOiK13171.
    OMAiIRPWIAN.

    Family and domain databases

    Gene3Di1.20.1390.10. 1 hit.
    InterProiIPR002483. PWI_dom.
    [Graphical view]
    PfamiPF01480. PWI. 1 hit.
    [Graphical view]
    SMARTiSM00311. PWI. 1 hit.
    [Graphical view]
    SUPFAMiSSF101233. SSF101233. 1 hit.
    PROSITEiPS51025. PWI. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q8L7W3-1 [UniParc]FASTAAdd to Basket

    « Hide

    MSGGFFRGTS AEQDTRFSNK QAKLMKSQKF APELENLVDI TKVKMDVMKP    50
    WIATRVTELL GIEDEVLINF IYGLLDGKVV NGKEIQITLT GFMEKNTGKF 100
    MKELWTLLLS AQNNPSGVPQ QFLDARAAET KKKQEEANEI MKKREGDKKN 150
    IEHDILRKID SGVEHKETNG MDAKPSRDRP EDGRRADEKN GVKERRRDLI 200
    PPRRGDASRS PLRGSRSRSI SKTNSGSKSY SGERKSRSTS QSSDASISPR 250
    KRRLSNSRRR SRSRSVRRSL SPRRRRIHSP FRSRSRSPIR RHRRPTHEGR 300
    RQSPAPSRRR RSPSPPARRR RSPSPPARRR RSPSPPARRH RSPTPPARQR 350
    RSPSPPARRH RSPPPARRRR SPSPPARRRR SPSPPARRRR SPSPLYRRNR 400
    SPSPLYRRNR SRSPLAKRGR SDSPGRSPSP VARLRDPTGA RLPSPSIEQR 450
    LPSPPVAQRL PSPPPRRAGL PSPPPAQRLP SPPPRRAGLP SPMRIGGSHA 500
    ANHLESPSPS SLSPPGRKKV LPSPPVRRRR SLTPDEERVS LSQGGRHTSP 550
    SHIKQDGSMS PVRGRGKSSP SSRHQKARSP VRRRSPTPVN RRSRRSSSAS 600
    RSPDRRRRRS PSSSRSPSRS RSPPVLHRSP SPRGRKHQRE RRSPGRLSEE 650
    QDRVQNSKLL KRTSVPDTDK RKQLPEKLLE VGRVEHYKEQ ERKSDKLSEK 700
    RSVHRHHGSQ MSPVENSEGR SRPVSSKVKD SEQVEKEDNS DLDANLSCDS 750
    KDTIRHQIKD KNRRKNKRSS REEVSSDDNG SSDSDVDDRK EAKRRRKEEK 800
    KTRKEEKKRR REERHRKREE RRGGKEKHKK QELSDTSEGE VEARPKIKKG 850
    EESDPKRLEI ELRNKALESL KAKKGISH 878
    Length:878
    Mass (Da):100,479
    Last modified:October 1, 2002 - v1
    Checksum:iAB236ED2854D760B
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AY125501 mRNA. Translation: AAM78093.1.
    BT000633 mRNA. Translation: AAN18199.1.
    CP002685 Genomic DNA. Translation: AEC08223.1.
    RefSeqiNP_180484.2. NM_128477.3.
    UniGeneiAt.25482.

    Genome annotation databases

    EnsemblPlantsiAT2G29210.1; AT2G29210.1; AT2G29210.
    GeneIDi817470.
    KEGGiath:AT2G29210.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AY125501 mRNA. Translation: AAM78093.1 .
    BT000633 mRNA. Translation: AAN18199.1 .
    CP002685 Genomic DNA. Translation: AEC08223.1 .
    RefSeqi NP_180484.2. NM_128477.3.
    UniGenei At.25482.

    3D structure databases

    SMRi Q8L7W3. Positions 29-133.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 3702.AT2G29210.1-P.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblPlantsi AT2G29210.1 ; AT2G29210.1 ; AT2G29210 .
    GeneIDi 817470.
    KEGGi ath:AT2G29210.

    Organism-specific databases

    TAIRi AT2G29210.

    Phylogenomic databases

    eggNOGi NOG242213.
    HOGENOMi HOG000148632.
    InParanoidi Q8L7W3.
    KOi K13171.
    OMAi IRPWIAN.

    Enzyme and pathway databases

    Reactomei REACT_180054. mRNA Splicing - Major Pathway.

    Miscellaneous databases

    PROi Q8L7W3.

    Gene expression databases

    Genevestigatori Q8L7W3.

    Family and domain databases

    Gene3Di 1.20.1390.10. 1 hit.
    InterProi IPR002483. PWI_dom.
    [Graphical view ]
    Pfami PF01480. PWI. 1 hit.
    [Graphical view ]
    SMARTi SM00311. PWI. 1 hit.
    [Graphical view ]
    SUPFAMi SSF101233. SSF101233. 1 hit.
    PROSITEi PS51025. PWI. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. ColumbiaImported.
    2. Cited for: NUCLEOTIDE SEQUENCE.
    3. Cited for: NUCLEOTIDE SEQUENCE.
    4. "Phosphoproteomics reveals extensive in vivo phosphorylation of Arabidopsis proteins involved in RNA metabolism."
      de la Fuente van Bentem S., Anrather D., Roitinger E., Djamei A., Hufnagl T., Barta A., Csaszar E., Dohnal I., Lecourieux D., Hirt H.
      Nucleic Acids Res. 34:3267-3278(2006) [PubMed] [Europe PMC] [Abstract]
      Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
    5. "Phosphoproteomic analysis of nuclei-enriched fractions from Arabidopsis thaliana."
      Jones A.M., MacLean D., Studholme D.J., Serna-Sanz A., Andreasson E., Rathjen J.P., Peck S.C.
      J. Proteomics 72:439-451(2009) [PubMed] [Europe PMC] [Abstract]
      Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
    6. "Large-scale Arabidopsis phosphoproteome profiling reveals novel chloroplast kinase substrates and phosphorylation networks."
      Reiland S., Messerli G., Baerenfaller K., Gerrits B., Endler A., Grossmann J., Gruissem W., Baginsky S.
      Plant Physiol. 150:889-903(2009) [PubMed] [Europe PMC] [Abstract]
      Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
    7. TAIR
      Swarbreck D., Lamesch P., Wilks C., Huala E.
      Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
    8. The Arabidopsis Information Resource (TAIR)
      Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
      Cited for: GENOME REANNOTATION.
      Strain: cv. ColumbiaImported.

    Entry informationi

    Entry nameiQ8L7W3_ARATH
    AccessioniPrimary (citable) accession number: Q8L7W3
    Entry historyi
    Integrated into UniProtKB/TrEMBL: October 1, 2002
    Last sequence update: October 1, 2002
    Last modified: October 1, 2014
    This is version 79 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3