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Q8L7W3 (Q8L7W3_ARATH) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 74. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names

Serine/arginine repetitive matrix protein 1-like protein EMBL AEC08223.1
Gene names
Ordered Locus Names:AT2G29210 EMBL AEC08223.1, At2g29210 TAIR AT2G29210
OrganismArabidopsis thaliana (Mouse-ear cress) [Reference proteome] EMBL AAM78093.1
Taxonomic identifier3702 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis

Protein attributes

Sequence length878 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

Ontologies

Binary interactions

With

Entry

#Exp.

IntAct

Notes

At4g33690Q6NPE92EBI-4430408,EBI-4430370

Sequences

Sequence LengthMass (Da)Tools
Q8L7W3 [UniParc].

Last modified October 1, 2002. Version 1.
Checksum: AB236ED2854D760B

FASTA878100,479
        10         20         30         40         50         60 
MSGGFFRGTS AEQDTRFSNK QAKLMKSQKF APELENLVDI TKVKMDVMKP WIATRVTELL 

        70         80         90        100        110        120 
GIEDEVLINF IYGLLDGKVV NGKEIQITLT GFMEKNTGKF MKELWTLLLS AQNNPSGVPQ 

       130        140        150        160        170        180 
QFLDARAAET KKKQEEANEI MKKREGDKKN IEHDILRKID SGVEHKETNG MDAKPSRDRP 

       190        200        210        220        230        240 
EDGRRADEKN GVKERRRDLI PPRRGDASRS PLRGSRSRSI SKTNSGSKSY SGERKSRSTS 

       250        260        270        280        290        300 
QSSDASISPR KRRLSNSRRR SRSRSVRRSL SPRRRRIHSP FRSRSRSPIR RHRRPTHEGR 

       310        320        330        340        350        360 
RQSPAPSRRR RSPSPPARRR RSPSPPARRR RSPSPPARRH RSPTPPARQR RSPSPPARRH 

       370        380        390        400        410        420 
RSPPPARRRR SPSPPARRRR SPSPPARRRR SPSPLYRRNR SPSPLYRRNR SRSPLAKRGR 

       430        440        450        460        470        480 
SDSPGRSPSP VARLRDPTGA RLPSPSIEQR LPSPPVAQRL PSPPPRRAGL PSPPPAQRLP 

       490        500        510        520        530        540 
SPPPRRAGLP SPMRIGGSHA ANHLESPSPS SLSPPGRKKV LPSPPVRRRR SLTPDEERVS 

       550        560        570        580        590        600 
LSQGGRHTSP SHIKQDGSMS PVRGRGKSSP SSRHQKARSP VRRRSPTPVN RRSRRSSSAS 

       610        620        630        640        650        660 
RSPDRRRRRS PSSSRSPSRS RSPPVLHRSP SPRGRKHQRE RRSPGRLSEE QDRVQNSKLL 

       670        680        690        700        710        720 
KRTSVPDTDK RKQLPEKLLE VGRVEHYKEQ ERKSDKLSEK RSVHRHHGSQ MSPVENSEGR 

       730        740        750        760        770        780 
SRPVSSKVKD SEQVEKEDNS DLDANLSCDS KDTIRHQIKD KNRRKNKRSS REEVSSDDNG 

       790        800        810        820        830        840 
SSDSDVDDRK EAKRRRKEEK KTRKEEKKRR REERHRKREE RRGGKEKHKK QELSDTSEGE 

       850        860        870 
VEARPKIKKG EESDPKRLEI ELRNKALESL KAKKGISH 

« Hide

References

« Hide 'large scale' references
[1]"Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana."
Lin X., Kaul S., Rounsley S.D., Shea T.P., Benito M.-I., Town C.D., Fujii C.Y., Mason T.M., Bowman C.L., Barnstead M.E., Feldblyum T.V., Buell C.R., Ketchum K.A., Lee J.J., Ronning C.M., Koo H.L., Moffat K.S., Cronin L.A. expand/collapse author list , Shen M., Pai G., Van Aken S., Umayam L., Tallon L.J., Gill J.E., Adams M.D., Carrera A.J., Creasy T.H., Goodman H.M., Somerville C.R., Copenhaver G.P., Preuss D., Nierman W.C., White O., Eisen J.A., Salzberg S.L., Fraser C.M., Venter J.C.
Nature 402:761-768(1999) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Columbia.
[2]"Arabidopsis cDNA clones."
Shinn P., Chen H., Cheuk R., Kim C.J., Banh J., Bowser L., Carninci P., Chang E., Dale J.M., Goldsmith A.D., Hayashizaki Y., Ishida J., Jones T., Kamiya A., Karlin-Neumann G., Kawai J., Lam B., Lee J.M. expand/collapse author list , Lin J., Miranda M., Narusaka M., Nguyen M., Onodera C.S., Palm C.J., Quach H.L., Sakurai T., Satou M., Seki M., Southwick A., Tang C.C., Toriumi M., Wu H.C., Yamada K., Yamamura Y., Yu G., Yu S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R.
Submitted (JUN-2002) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[3]"Arabidopsis ORF clones."
Cheuk R., Chen H., Kim C.J., Shinn P., Bowser L., Carninci P., Chan M.M., Chang C.H., Dale J.M., Deng J.M., Hayashizaki Y., Hsuan V.W., Ishida J., Jones T., Kamiya A., Karlin-Neumann G., Kawai J., Lam B. expand/collapse author list , Lee J.M., Lin J., Miranda M., Narusaka M., Nguyen M., Palm C.J., Quach H.L., Sakurai T., Satou M., Seki M., Southwick A., Tang C.C., Toriumi M., Wallender E.K., Wong C., Wu H.C., Yamada K., Yu G., Yuan S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R.
Submitted (SEP-2002) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[4]TAIR
Swarbreck D., Lamesch P., Wilks C., Huala E.
Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[5]The Arabidopsis Information Resource (TAIR)
Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
Cited for: GENOME REANNOTATION.
Strain: cv. Columbia.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AY125501 mRNA. Translation: AAM78093.1.
BT000633 mRNA. Translation: AAN18199.1.
CP002685 Genomic DNA. Translation: AEC08223.1.
RefSeqNP_180484.2. NM_128477.3.
UniGeneAt.25482.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING3702.AT2G29210.1-P.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsAT2G29210.1; AT2G29210.1; AT2G29210.
GeneID817470.
KEGGath:AT2G29210.

Organism-specific databases

TAIRAt2g29210.
AT2G29210.

Phylogenomic databases

eggNOGNOG242213.
HOGENOMHOG000148632.
InParanoidQ8L7W3.
KOK13171.
OMAIRPWIAN.
ProtClustDBCLSN2721845.

Gene expression databases

GenevestigatorQ8L7W3.

Family and domain databases

Gene3D1.20.1390.10. 1 hit.
InterProIPR002483. PWI_dom.
[Graphical view]
PfamPF01480. PWI. 1 hit.
[Graphical view]
SMARTSM00311. PWI. 1 hit.
[Graphical view]
SUPFAMSSF101233. SSF101233. 1 hit.
PROSITEPS51025. PWI. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

PROQ8L7W3.

Entry information

Entry nameQ8L7W3_ARATH
AccessionPrimary (citable) accession number: Q8L7W3
Entry history
Integrated into UniProtKB/TrEMBL: October 1, 2002
Last sequence update: October 1, 2002
Last modified: April 16, 2014
This is version 74 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)