Q8L7W3 (Q8L7W3_ARATH) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
At2g29210/F16P2.41 EMBL AAM78093.1

Submitted name:
Serine/arginine repetitive matrix protein 1 EMBL AEC08223.1

Gene names

Ordered Locus Names:

AT2G29210 EMBL AEC08223.1, At2g29210 TAIR At2g29210

Organism

Arabidopsis thaliana (Mouse-ear cress) [Reference proteome] EMBL AAM78093.1

Taxonomic identifier

3702 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Viridiplantae › Streptophyta › Streptophytina › Embryophyta › Tracheophyta › Euphyllophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › malvids › Brassicales › Brassicaceae › Camelineae › Arabidopsis

Protein attributes

Sequence length	878 AA.
Sequence status	Complete.
Protein existence	Evidence at protein level

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	RNA splicing Non-traceable author statement PubMed 16807317. Source: TAIR mRNA processing Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Binary interactions

With	Entry	#Exp.	IntAct	Notes
At4g33690	Q6NPE9	2	EBI-4430408,EBI-4430370

Sequences

	Sequence		Length	Mass (Da)
	Q8L7W3 [UniParc]. Last modified October 1, 2002. Version 1. Checksum: AB236ED2854D760B	FASTA	878	100,479
	10 20 30 40 50 60 MSGGFFRGTS AEQDTRFSNK QAKLMKSQKF APELENLVDI TKVKMDVMKP WIATRVTELL 70 80 90 100 110 120 GIEDEVLINF IYGLLDGKVV NGKEIQITLT GFMEKNTGKF MKELWTLLLS AQNNPSGVPQ 130 140 150 160 170 180 QFLDARAAET KKKQEEANEI MKKREGDKKN IEHDILRKID SGVEHKETNG MDAKPSRDRP 190 200 210 220 230 240 EDGRRADEKN GVKERRRDLI PPRRGDASRS PLRGSRSRSI SKTNSGSKSY SGERKSRSTS 250 260 270 280 290 300 QSSDASISPR KRRLSNSRRR SRSRSVRRSL SPRRRRIHSP FRSRSRSPIR RHRRPTHEGR 310 320 330 340 350 360 RQSPAPSRRR RSPSPPARRR RSPSPPARRR RSPSPPARRH RSPTPPARQR RSPSPPARRH 370 380 390 400 410 420 RSPPPARRRR SPSPPARRRR SPSPPARRRR SPSPLYRRNR SPSPLYRRNR SRSPLAKRGR 430 440 450 460 470 480 SDSPGRSPSP VARLRDPTGA RLPSPSIEQR LPSPPVAQRL PSPPPRRAGL PSPPPAQRLP 490 500 510 520 530 540 SPPPRRAGLP SPMRIGGSHA ANHLESPSPS SLSPPGRKKV LPSPPVRRRR SLTPDEERVS 550 560 570 580 590 600 LSQGGRHTSP SHIKQDGSMS PVRGRGKSSP SSRHQKARSP VRRRSPTPVN RRSRRSSSAS 610 620 630 640 650 660 RSPDRRRRRS PSSSRSPSRS RSPPVLHRSP SPRGRKHQRE RRSPGRLSEE QDRVQNSKLL 670 680 690 700 710 720 KRTSVPDTDK RKQLPEKLLE VGRVEHYKEQ ERKSDKLSEK RSVHRHHGSQ MSPVENSEGR 730 740 750 760 770 780 SRPVSSKVKD SEQVEKEDNS DLDANLSCDS KDTIRHQIKD KNRRKNKRSS REEVSSDDNG 790 800 810 820 830 840 SSDSDVDDRK EAKRRRKEEK KTRKEEKKRR REERHRKREE RRGGKEKHKK QELSDTSEGE 850 860 870 VEARPKIKKG EESDPKRLEI ELRNKALESL KAKKGISH

References

[1]	"Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana." Lin X., Kaul S., Rounsley S., Shea T.P., Benito M.I., Town C.D., Fujii C.Y., Mason T., Bowman C.L., Barnstead M., Feldblyum T.V., Buell C.R., Ketchum K.A., Lee J., Ronning C.M., Koo H.L., Moffat K.S., Cronin L.A. , Shen M., Pai G., Van Aken S., Umayam L., Tallon L.J., Gill J.E., Adams M.D., Carrera A.J., Creasy T.H., Goodman H.M., Somerville C.R., Copenhaver G.P., Preuss D., Nierman W.C., White O., Eisen J.A., Salzberg S.L., Fraser C.M., Venter J.C. Nature 402:761-768(1999) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE.
[2]	"Arabidopsis cDNA clones." Shinn P., Chen H., Cheuk R., Kim C.J., Banh J., Bowser L., Carninci P., Chang E., Dale J.M., Goldsmith A.D., Hayashizaki Y., Ishida J., Jones T., Kamiya A., Karlin-Neumann G., Kawai J., Lam B., Lee J.M. , Lin J., Miranda M., Narusaka M., Nguyen M., Onodera C.S., Palm C.J., Quach H.L., Sakurai T., Satou M., Seki M., Southwick A., Tang C.C., Toriumi M., Wu H.C., Yamada K., Yamamura Y., Yu G., Yu S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R. Submitted (JUN-2002) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.
[3]	"Arabidopsis ORF clones." Cheuk R., Chen H., Kim C.J., Shinn P., Bowser L., Carninci P., Chan M.M., Chang C.H., Dale J.M., Deng J.M., Hayashizaki Y., Hsuan V.W., Ishida J., Jones T., Kamiya A., Karlin-Neumann G., Kawai J., Lam B. , Lee J.M., Lin J., Miranda M., Narusaka M., Nguyen M., Palm C.J., Quach H.L., Sakurai T., Satou M., Seki M., Southwick A., Tang C.C., Toriumi M., Wallender E.K., Wong C., Wu H.C., Yamada K., Yu G., Yuan S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R. Submitted (SEP-2002) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.
[4]	TAIR Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.
[5]	The Arabidopsis Information Resource (TAIR) Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases Cited for: GENOME REANNOTATION. Strain: cv. Columbia.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AY125501 mRNA. Translation: AAM78093.1. BT000633 mRNA. Translation: AAN18199.1. CP002685 Genomic DNA. Translation: AEC08223.1.
IPI	IPI00546855.
RefSeq	NP_180484.2. NM_128477.3.
UniGene	At.25482.
3D structure databases
SMR	Q8L7W3. Positions 29-133.
ModBase	Search...
Protein-protein interaction databases
IntAct	Q8L7W3. 5 interactions.
STRING	3702.AT2G29210.1-P.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblPlants	AT2G29210.1; AT2G29210.1; AT2G29210.
GeneID	817470.
KEGG	ath:AT2G29210.
Organism-specific databases
TAIR	At2g29210.
Phylogenomic databases
eggNOG	NOG242213.
HOGENOM	HOG000148632.
InParanoid	Q8L7W3.
KO	K13171.
OMA	HAGEESP.
ProtClustDB	CLSN2721845.
Gene expression databases
Genevestigator	Q8L7W3.
Family and domain databases
Gene3D	1.20.1390.10. 1 hit.
InterPro	IPR002483. PWI_dom. [Graphical view]
Pfam	PF01480. PWI. 1 hit. [Graphical view]
SMART	SM00311. PWI. 1 hit. [Graphical view]
SUPFAM	SSF101233. PWI. 1 hit.
PROSITE	PS51025. PWI. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q8L7W3_ARATH

Accession

Primary (citable) accession number: Q8L7W3

Entry history

Integrated into UniProtKB/TrEMBL:	October 1, 2002
Last sequence update:	October 1, 2002
Last modified:	May 29, 2013
This is version 64 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)