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Protein
Submitted name:

At2g29210/F16P2.41

Gene

At2g29210

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Biological processi

  • mRNA processing Source: InterPro
  • RNA splicing Source: TAIR

Enzyme and pathway databases

ReactomeiR-ATH-72163 mRNA Splicing - Major Pathway
R-ATH-72187 mRNA 3'-end processing

Names & Taxonomyi

Protein namesi
Submitted name:
At2g29210/F16P2.41Imported
Submitted name:
Splicing factor PWI domain-containing proteinImported
Gene namesi
Ordered Locus Names:At2g29210Imported
ORF Names:F16P2.41Imported, F16P2_41Imported
OrganismiArabidopsis thaliana (Mouse-ear cress)Imported
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 2

Organism-specific databases

AraportiAT2G29210
TAIRilocus:2043172 AT2G29210

Expressioni

Gene expression databases

ExpressionAtlasiQ8L7W3 differential

Interactioni

Binary interactionsi

WithEntry#Exp.IntActNotes
At4g33690Q6NPE92EBI-4430408,EBI-4430370

Protein-protein interaction databases

IntActiQ8L7W3, 5 interactors
STRINGi3702.AT2G29210.1

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini27 – 125PWIInterPro annotationAdd BLAST99

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili789 – 822Sequence analysisAdd BLAST34

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiKOG2146 Eukaryota
ENOG4111IMU LUCA
HOGENOMiHOG000148632
OMAiNARQFMG
OrthoDBiEOG09360FY3

Family and domain databases

InterProiView protein in InterPro
IPR002483 PWI_dom
IPR036483 PWI_dom_sf
PfamiView protein in Pfam
PF01480 PWI, 1 hit
SMARTiView protein in SMART
SM00311 PWI, 1 hit
SUPFAMiSSF101233 SSF101233, 1 hit
PROSITEiView protein in PROSITE
PS51025 PWI, 1 hit

Sequencei

Sequence statusi: Complete.

Q8L7W3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSGGFFRGTS AEQDTRFSNK QAKLMKSQKF APELENLVDI TKVKMDVMKP
60 70 80 90 100
WIATRVTELL GIEDEVLINF IYGLLDGKVV NGKEIQITLT GFMEKNTGKF
110 120 130 140 150
MKELWTLLLS AQNNPSGVPQ QFLDARAAET KKKQEEANEI MKKREGDKKN
160 170 180 190 200
IEHDILRKID SGVEHKETNG MDAKPSRDRP EDGRRADEKN GVKERRRDLI
210 220 230 240 250
PPRRGDASRS PLRGSRSRSI SKTNSGSKSY SGERKSRSTS QSSDASISPR
260 270 280 290 300
KRRLSNSRRR SRSRSVRRSL SPRRRRIHSP FRSRSRSPIR RHRRPTHEGR
310 320 330 340 350
RQSPAPSRRR RSPSPPARRR RSPSPPARRR RSPSPPARRH RSPTPPARQR
360 370 380 390 400
RSPSPPARRH RSPPPARRRR SPSPPARRRR SPSPPARRRR SPSPLYRRNR
410 420 430 440 450
SPSPLYRRNR SRSPLAKRGR SDSPGRSPSP VARLRDPTGA RLPSPSIEQR
460 470 480 490 500
LPSPPVAQRL PSPPPRRAGL PSPPPAQRLP SPPPRRAGLP SPMRIGGSHA
510 520 530 540 550
ANHLESPSPS SLSPPGRKKV LPSPPVRRRR SLTPDEERVS LSQGGRHTSP
560 570 580 590 600
SHIKQDGSMS PVRGRGKSSP SSRHQKARSP VRRRSPTPVN RRSRRSSSAS
610 620 630 640 650
RSPDRRRRRS PSSSRSPSRS RSPPVLHRSP SPRGRKHQRE RRSPGRLSEE
660 670 680 690 700
QDRVQNSKLL KRTSVPDTDK RKQLPEKLLE VGRVEHYKEQ ERKSDKLSEK
710 720 730 740 750
RSVHRHHGSQ MSPVENSEGR SRPVSSKVKD SEQVEKEDNS DLDANLSCDS
760 770 780 790 800
KDTIRHQIKD KNRRKNKRSS REEVSSDDNG SSDSDVDDRK EAKRRRKEEK
810 820 830 840 850
KTRKEEKKRR REERHRKREE RRGGKEKHKK QELSDTSEGE VEARPKIKKG
860 870
EESDPKRLEI ELRNKALESL KAKKGISH
Length:878
Mass (Da):100,479
Last modified:October 1, 2002 - v1
Checksum:iAB236ED2854D760B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY125501 mRNA Translation: AAM78093.1
BT000633 mRNA Translation: AAN18199.1
CP002685 Genomic DNA Translation: AEC08223.1
RefSeqiNP_180484.2, NM_128477.4
UniGeneiAt.25482

Genome annotation databases

EnsemblPlantsiAT2G29210.1; AT2G29210.1; AT2G29210
GeneIDi817470
GrameneiAT2G29210.1; AT2G29210.1; AT2G29210

Similar proteinsi

Entry informationi

Entry nameiQ8L7W3_ARATH
AccessioniPrimary (citable) accession number: Q8L7W3
Entry historyiIntegrated into UniProtKB/TrEMBL: October 1, 2002
Last sequence update: October 1, 2002
Last modified: May 23, 2018
This is version 114 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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