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Q8L7B2

- SCP20_ARATH

UniProt

Q8L7B2 - SCP20_ARATH

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Protein

Serine carboxypeptidase-like 20

Gene

SCPL20

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed - Annotation score: 3 out of 5- Experimental evidence at transcript leveli

Functioni

Probable carboxypeptidase.By similarity

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei186 – 1861By similarity
Active sitei421 – 4211By similarity
Active sitei474 – 4741By similarity

GO - Molecular functioni

  1. serine-type carboxypeptidase activity Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Carboxypeptidase, Hydrolase, Protease

Enzyme and pathway databases

BioCyciARA:AT4G12910-MONOMER.

Protein family/group databases

MEROPSiS10.A11.

Names & Taxonomyi

Protein namesi
Recommended name:
Serine carboxypeptidase-like 20 (EC:3.4.16.-)
Gene namesi
Name:SCPL20
Ordered Locus Names:At4g12910
ORF Names:F25G13.7
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
ProteomesiUP000006548: Chromosome 4

Organism-specific databases

TAIRiAT4G12910.

Subcellular locationi

Secreted Curated

GO - Cellular componenti

  1. extracellular region Source: UniProtKB-KW
  2. peroxisome Source: TAIR
  3. vacuole Source: TAIR
Complete GO annotation...

Keywords - Cellular componenti

Secreted

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2929Sequence AnalysisAdd
BLAST
Chaini30 – 497468Serine carboxypeptidase-like 20PRO_0000274636Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Disulfide bondi90 ↔ 386By similarity
Glycosylationi111 – 1111N-linked (GlcNAc...)Sequence Analysis
Glycosylationi146 – 1461N-linked (GlcNAc...)Sequence Analysis
Glycosylationi249 – 2491N-linked (GlcNAc...)Sequence Analysis
Disulfide bondi254 ↔ 266By similarity
Disulfide bondi289 ↔ 353By similarity
Glycosylationi405 – 4051N-linked (GlcNAc...)Sequence Analysis
Glycosylationi463 – 4631N-linked (GlcNAc...)Sequence Analysis

Keywords - PTMi

Disulfide bond, Glycoprotein

Proteomic databases

PaxDbiQ8L7B2.
PRIDEiQ8L7B2.

Expressioni

Tissue specificityi

Ubiquitous.1 Publication

Gene expression databases

GenevestigatoriQ8L7B2.

Interactioni

Protein-protein interaction databases

STRINGi3702.AT4G12910.1-P.

Structurei

3D structure databases

ProteinModelPortaliQ8L7B2.
SMRiQ8L7B2. Positions 35-494.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Motif

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Motifi495 – 4973Microbody targeting signalSequence Analysis

Sequence similaritiesi

Belongs to the peptidase S10 family.Curated

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiCOG2939.
HOGENOMiHOG000198297.
InParanoidiQ8L7B2.
KOiK16296.
OMAiDYLVTHD.
PhylomeDBiQ8L7B2.

Family and domain databases

Gene3Di3.40.50.1820. 2 hits.
InterProiIPR029058. AB_hydrolase.
IPR001563. Peptidase_S10.
IPR018202. Peptidase_S10_AS.
[Graphical view]
PANTHERiPTHR11802. PTHR11802. 1 hit.
PfamiPF00450. Peptidase_S10. 1 hit.
[Graphical view]
PRINTSiPR00724. CRBOXYPTASEC.
SUPFAMiSSF53474. SSF53474. 2 hits.
PROSITEiPS00560. CARBOXYPEPT_SER_HIS. 1 hit.
PS00131. CARBOXYPEPT_SER_SER. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q8L7B2-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MSIITMVWLM KVFVFVTLLS LVFVITESAP ESALITKLPG FEGTFPSKHY
60 70 80 90 100
SGYVTIDKEH GKNLWYYFIE SEKNPSKDPV VLWLNGGPGC SSMDGFVYEH
110 120 130 140 150
GPFNFELPKK NNSLPLLHLN PYSWSKVSNI IYLDSPVGVG FSYSNNKSDY
160 170 180 190 200
ITGDIKTAVD SHAFLLKWFQ MFPEFQSNPF FISGESYAGV YVPTLASEVV
210 220 230 240 250
IGNKNGVKPA LNFKGYLVGN GVADPKFDGN AFVPFAHGMG LISDELFENV
260 270 280 290 300
TKACKGNFYE IEGLECEEQY TKVNDDTNQL NIYNILEPCY HGTSLSAFDI
310 320 330 340 350
RSLPSSLLQL GKTEKRLPIR KRMFGRAWPV RAPVHPGIVP SWSQLLADVT
360 370 380 390 400
VPCIDDRVAT AWLNDPEIRK AIHTKEESEI GRWELCSGKL SFYHDAGSMI
410 420 430 440 450
DFHRNLTLSG YRALIYSGDH DMCVPFTGSE AWTKSLGYKV IDEWRAWISN
460 470 480 490
DQVAGYTQGY ANNLTFLTIK GAGHTVPEYK PREALDFYSR FLEGSKI
Length:497
Mass (Da):55,833
Last modified:February 6, 2007 - v2
Checksum:i0258C97B8C6A9D8B
GO

Sequence cautioni

The sequence CAB53091.1 differs from that shown. Reason: Frameshift at position 479.
The sequence CAB78333.1 differs from that shown. Reason: Frameshift at position 479.
The sequence CAB53091.1 differs from that shown. Reason: Erroneous gene model prediction.
The sequence CAB78333.1 differs from that shown. Reason: Erroneous gene model prediction.

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti221 – 2211G → V in AAM97031. (PubMed:14593172)Curated
Sequence conflicti221 – 2211G → V in AAN15500. (PubMed:14593172)Curated

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AL079349 Genomic DNA. Translation: CAB53091.1. Sequence problems.
AL161535 Genomic DNA. Translation: CAB78333.1. Sequence problems.
CP002687 Genomic DNA. Translation: AEE83202.1.
AY136365 mRNA. Translation: AAM97031.1.
BT000181 mRNA. Translation: AAN15500.1.
PIRiA85139.
RefSeqiNP_193027.5. NM_117360.7.
UniGeneiAt.45003.

Genome annotation databases

EnsemblPlantsiAT4G12910.1; AT4G12910.1; AT4G12910.
GeneIDi826903.
KEGGiath:AT4G12910.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AL079349 Genomic DNA. Translation: CAB53091.1 . Sequence problems.
AL161535 Genomic DNA. Translation: CAB78333.1 . Sequence problems.
CP002687 Genomic DNA. Translation: AEE83202.1 .
AY136365 mRNA. Translation: AAM97031.1 .
BT000181 mRNA. Translation: AAN15500.1 .
PIRi A85139.
RefSeqi NP_193027.5. NM_117360.7.
UniGenei At.45003.

3D structure databases

ProteinModelPortali Q8L7B2.
SMRi Q8L7B2. Positions 35-494.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 3702.AT4G12910.1-P.

Protein family/group databases

MEROPSi S10.A11.

Proteomic databases

PaxDbi Q8L7B2.
PRIDEi Q8L7B2.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblPlantsi AT4G12910.1 ; AT4G12910.1 ; AT4G12910 .
GeneIDi 826903.
KEGGi ath:AT4G12910.

Organism-specific databases

TAIRi AT4G12910.

Phylogenomic databases

eggNOGi COG2939.
HOGENOMi HOG000198297.
InParanoidi Q8L7B2.
KOi K16296.
OMAi DYLVTHD.
PhylomeDBi Q8L7B2.

Enzyme and pathway databases

BioCyci ARA:AT4G12910-MONOMER.

Gene expression databases

Genevestigatori Q8L7B2.

Family and domain databases

Gene3Di 3.40.50.1820. 2 hits.
InterProi IPR029058. AB_hydrolase.
IPR001563. Peptidase_S10.
IPR018202. Peptidase_S10_AS.
[Graphical view ]
PANTHERi PTHR11802. PTHR11802. 1 hit.
Pfami PF00450. Peptidase_S10. 1 hit.
[Graphical view ]
PRINTSi PR00724. CRBOXYPTASEC.
SUPFAMi SSF53474. SSF53474. 2 hits.
PROSITEi PS00560. CARBOXYPEPT_SER_HIS. 1 hit.
PS00131. CARBOXYPEPT_SER_SER. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana."
    Mayer K.F.X., Schueller C., Wambutt R., Murphy G., Volckaert G., Pohl T., Duesterhoeft A., Stiekema W., Entian K.-D., Terryn N., Harris B., Ansorge W., Brandt P., Grivell L.A., Rieger M., Weichselgartner M., de Simone V., Obermaier B.
    , Mache R., Mueller M., Kreis M., Delseny M., Puigdomenech P., Watson M., Schmidtheini T., Reichert B., Portetelle D., Perez-Alonso M., Boutry M., Bancroft I., Vos P., Hoheisel J., Zimmermann W., Wedler H., Ridley P., Langham S.-A., McCullagh B., Bilham L., Robben J., van der Schueren J., Grymonprez B., Chuang Y.-J., Vandenbussche F., Braeken M., Weltjens I., Voet M., Bastiaens I., Aert R., Defoor E., Weitzenegger T., Bothe G., Ramsperger U., Hilbert H., Braun M., Holzer E., Brandt A., Peters S., van Staveren M., Dirkse W., Mooijman P., Klein Lankhorst R., Rose M., Hauf J., Koetter P., Berneiser S., Hempel S., Feldpausch M., Lamberth S., Van den Daele H., De Keyser A., Buysshaert C., Gielen J., Villarroel R., De Clercq R., van Montagu M., Rogers J., Cronin A., Quail M.A., Bray-Allen S., Clark L., Doggett J., Hall S., Kay M., Lennard N., McLay K., Mayes R., Pettett A., Rajandream M.A., Lyne M., Benes V., Rechmann S., Borkova D., Bloecker H., Scharfe M., Grimm M., Loehnert T.-H., Dose S., de Haan M., Maarse A.C., Schaefer M., Mueller-Auer S., Gabel C., Fuchs M., Fartmann B., Granderath K., Dauner D., Herzl A., Neumann S., Argiriou A., Vitale D., Liguori R., Piravandi E., Massenet O., Quigley F., Clabauld G., Muendlein A., Felber R., Schnabl S., Hiller R., Schmidt W., Lecharny A., Aubourg S., Chefdor F., Cooke R., Berger C., Monfort A., Casacuberta E., Gibbons T., Weber N., Vandenbol M., Bargues M., Terol J., Torres A., Perez-Perez A., Purnelle B., Bent E., Johnson S., Tacon D., Jesse T., Heijnen L., Schwarz S., Scholler P., Heber S., Francs P., Bielke C., Frishman D., Haase D., Lemcke K., Mewes H.-W., Stocker S., Zaccaria P., Bevan M., Wilson R.K., de la Bastide M., Habermann K., Parnell L., Dedhia N., Gnoj L., Schutz K., Huang E., Spiegel L., Sekhon M., Murray J., Sheet P., Cordes M., Abu-Threideh J., Stoneking T., Kalicki J., Graves T., Harmon G., Edwards J., Latreille P., Courtney L., Cloud J., Abbott A., Scott K., Johnson D., Minx P., Bentley D., Fulton B., Miller N., Greco T., Kemp K., Kramer J., Fulton L., Mardis E., Dante M., Pepin K., Hillier L.W., Nelson J., Spieth J., Ryan E., Andrews S., Geisel C., Layman D., Du H., Ali J., Berghoff A., Jones K., Drone K., Cotton M., Joshu C., Antonoiu B., Zidanic M., Strong C., Sun H., Lamar B., Yordan C., Ma P., Zhong J., Preston R., Vil D., Shekher M., Matero A., Shah R., Swaby I.K., O'Shaughnessy A., Rodriguez M., Hoffman J., Till S., Granat S., Shohdy N., Hasegawa A., Hameed A., Lodhi M., Johnson A., Chen E., Marra M.A., Martienssen R., McCombie W.R.
    Nature 402:769-777(1999) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Columbia.
  2. The Arabidopsis Information Resource (TAIR)
    Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: GENOME REANNOTATION.
    Strain: cv. Columbia.
  3. "Empirical analysis of transcriptional activity in the Arabidopsis genome."
    Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M., Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G., Liu S.X., Lam B., Sakano H., Wu T., Yu G.
    , Miranda M., Quach H.L., Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C., Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J., Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A., Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C., Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X., Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M., Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K., Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R.
    Science 302:842-846(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: cv. Columbia.
  4. "An expression and bioinformatics analysis of the Arabidopsis serine carboxypeptidase-like gene family."
    Fraser C.M., Rider L.W., Chapple C.
    Plant Physiol. 138:1136-1148(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENE FAMILY, TISSUE SPECIFICITY, NOMENCLATURE.

Entry informationi

Entry nameiSCP20_ARATH
AccessioniPrimary (citable) accession number: Q8L7B2
Secondary accession number(s): Q9SV78
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 6, 2007
Last sequence update: February 6, 2007
Last modified: October 29, 2014
This is version 73 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. Peptidase families
    Classification of peptidase families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3