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Protein
Submitted name:

At4g22290

Gene

At4g22290

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

Hydrolase, ProteaseImported

Names & Taxonomyi

Protein namesi
Submitted name:
At4g22290Imported
Submitted name:
Ubiquitin-specific protease C19-related proteinImported
Gene namesi
Ordered Locus Names:At4g22290Imported
OrganismiArabidopsis thaliana (Mouse-ear cress)Imported
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 4

Organism-specific databases

TAIRiAT4G22290.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei180 – 20122HelicalSequence analysisAdd
BLAST
Transmembranei207 – 22923HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiENOG410IVKQ. Eukaryota.
ENOG4111BIQ. LUCA.
HOGENOMiHOG000242640.
OMAiKAMVWAV.
PhylomeDBiQ8L6X7.

Sequencei

Sequence statusi: Complete.

Q8L6X7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAGRIQSHQL PNGLYVSGKL EQPKERPPTM AARAVPYTGG DIKKSGELGR
60 70 80 90 100
MFDISVVDSA SFQGPPPLIV GGNSSGGTSR LQAPPRVSGS SSNPNSGSVR
110 120 130 140 150
SGPNSGSVKK FSGPLSQLQP TGLITSGSLG SSGPILSGSR RSGQLDHQLS
160 170 180 190 200
NLASSKPKYG SSVTSLNVDP VRVGFKVPKA MVWAVLIVAA MGLLVGAFLT
210 220 230 240 250
VAVKKPVVIA AVLAAVCPAI VVLVWNCVWR RKGLLSFIKK YPDAELRGAI
260 270 280 290 300
DGQFVKVTGV VTCGSIPLES SFQRTPRCVY VSTELYEYKG FGGKSANPKH
310 320 330 340 350
RCFSWGSRHA EKYVSDFYIS DFQSGLRALV KAGYGSKVSP FVKPATVANV
360 370 380 390 400
TTQNKDLSPS FLKWLSDRNL SADDRVMRLK EGYIKEGSTV SVMGMVRRHD
410 420 430 440
NVLMIVPPAE AVSSGCRWWH CLFPTYADGL IITCDDNQNA DVIPV
Length:445
Mass (Da):47,537
Last modified:October 1, 2002 - v1
Checksum:iEEAA7EB23BD84665
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY140104 mRNA. Translation: AAM98245.1.
BT006592 mRNA. Translation: AAP31936.1.
CP002687 Genomic DNA. Translation: AEE84588.1.
RefSeqiNP_193960.2. NM_118355.2.
UniGeneiAt.47267.
At.71029.

Genome annotation databases

EnsemblPlantsiAT4G22290.1; AT4G22290.1; AT4G22290.
GeneIDi828324.
GrameneiAT4G22290.1; AT4G22290.1; AT4G22290.
KEGGiath:AT4G22290.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY140104 mRNA. Translation: AAM98245.1.
BT006592 mRNA. Translation: AAP31936.1.
CP002687 Genomic DNA. Translation: AEE84588.1.
RefSeqiNP_193960.2. NM_118355.2.
UniGeneiAt.47267.
At.71029.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiAT4G22290.1; AT4G22290.1; AT4G22290.
GeneIDi828324.
GrameneiAT4G22290.1; AT4G22290.1; AT4G22290.
KEGGiath:AT4G22290.

Organism-specific databases

TAIRiAT4G22290.

Phylogenomic databases

eggNOGiENOG410IVKQ. Eukaryota.
ENOG4111BIQ. LUCA.
HOGENOMiHOG000242640.
OMAiKAMVWAV.
PhylomeDBiQ8L6X7.

Family and domain databases

ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana."
    EU, CSHL and WU Arabidopsis Sequencing Project
    Mayer K.F.X., Schueller C., Wambutt R., Murphy G., Volckaert G., Pohl T., Duesterhoeft A., Stiekema W., Entian K.-D., Terryn N., Harris B., Ansorge W., Brandt P., Grivell L.A., Rieger M., Weichselgartner M., de Simone V., Obermaier B.
    , Mache R., Mueller M., Kreis M., Delseny M., Puigdomenech P., Watson M., Schmidtheini T., Reichert B., Portetelle D., Perez-Alonso M., Boutry M., Bancroft I., Vos P., Hoheisel J., Zimmermann W., Wedler H., Ridley P., Langham S.-A., McCullagh B., Bilham L., Robben J., van der Schueren J., Grymonprez B., Chuang Y.-J., Vandenbussche F., Braeken M., Weltjens I., Voet M., Bastiaens I., Aert R., Defoor E., Weitzenegger T., Bothe G., Ramsperger U., Hilbert H., Braun M., Holzer E., Brandt A., Peters S., van Staveren M., Dirkse W., Mooijman P., Klein Lankhorst R., Rose M., Hauf J., Koetter P., Berneiser S., Hempel S., Feldpausch M., Lamberth S., Van den Daele H., De Keyser A., Buysshaert C., Gielen J., Villarroel R., De Clercq R., van Montagu M., Rogers J., Cronin A., Quail M.A., Bray-Allen S., Clark L., Doggett J., Hall S., Kay M., Lennard N., McLay K., Mayes R., Pettett A., Rajandream M.A., Lyne M., Benes V., Rechmann S., Borkova D., Bloecker H., Scharfe M., Grimm M., Loehnert T.-H., Dose S., de Haan M., Maarse A.C., Schaefer M., Mueller-Auer S., Gabel C., Fuchs M., Fartmann B., Granderath K., Dauner D., Herzl A., Neumann S., Argiriou A., Vitale D., Liguori R., Piravandi E., Massenet O., Quigley F., Clabauld G., Muendlein A., Felber R., Schnabl S., Hiller R., Schmidt W., Lecharny A., Aubourg S., Chefdor F., Cooke R., Berger C., Monfort A., Casacuberta E., Gibbons T., Weber N., Vandenbol M., Bargues M., Terol J., Torres A., Perez-Perez A., Purnelle B., Bent E., Johnson S., Tacon D., Jesse T., Heijnen L., Schwarz S., Scholler P., Heber S., Francs P., Bielke C., Frishman D., Haase D., Lemcke K., Mewes H.-W., Stocker S., Zaccaria P., Bevan M., Wilson R.K., de la Bastide M., Habermann K., Parnell L., Dedhia N., Gnoj L., Schutz K., Huang E., Spiegel L., Sekhon M., Murray J., Sheet P., Cordes M., Abu-Threideh J., Stoneking T., Kalicki J., Graves T., Harmon G., Edwards J., Latreille P., Courtney L., Cloud J., Abbott A., Scott K., Johnson D., Minx P., Bentley D., Fulton B., Miller N., Greco T., Kemp K., Kramer J., Fulton L., Mardis E., Dante M., Pepin K., Hillier L.W., Nelson J., Spieth J., Ryan E., Andrews S., Geisel C., Layman D., Du H., Ali J., Berghoff A., Jones K., Drone K., Cotton M., Joshu C., Antonoiu B., Zidanic M., Strong C., Sun H., Lamar B., Yordan C., Ma P., Zhong J., Preston R., Vil D., Shekher M., Matero A., Shah R., Swaby I.K., O'Shaughnessy A., Rodriguez M., Hoffman J., Till S., Granat S., Shohdy N., Hasegawa A., Hameed A., Lodhi M., Johnson A., Chen E., Marra M.A., Martienssen R., McCombie W.R.
    Nature 402:769-777(1999) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. ColumbiaImported.
  2. Cited for: NUCLEOTIDE SEQUENCE.
  3. Cited for: NUCLEOTIDE SEQUENCE.
  4. "Large-scale Arabidopsis phosphoproteome profiling reveals novel chloroplast kinase substrates and phosphorylation networks."
    Reiland S., Messerli G., Baerenfaller K., Gerrits B., Endler A., Grossmann J., Gruissem W., Baginsky S.
    Plant Physiol. 150:889-903(2009) [PubMed] [Europe PMC] [Abstract]
    Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
  5. TAIR10
    Swarbreck D., Lamesch P., Wilks C., Huala E.
    Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
  6. The Arabidopsis Information Resource (TAIR)
    Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: GENOME REANNOTATION.
    Strain: cv. ColumbiaImported.

Entry informationi

Entry nameiQ8L6X7_ARATH
AccessioniPrimary (citable) accession number: Q8L6X7
Entry historyi
Integrated into UniProtKB/TrEMBL: October 1, 2002
Last sequence update: October 1, 2002
Last modified: April 13, 2016
This is version 80 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.