Unreviewed, UniProtKB/TrEMBL Q8L5Y6 (Q8L5Y6_ARATH)

Names and origin

Protein names

Submitted name:
    At2g02560 EMBL AAQ22603.1
Submitted name:
    Putative uncharacterized protein At2g02560 EMBL AAM20708.1

Gene names

Ordered Locus Names:

At2g02560 EMBL AAM20708.1 TAIR At2g02560

Organism

Arabidopsis thaliana (Mouse-ear cress) [Complete proteome]

Taxonomic identifier

3702 [NCBI]

Taxonomic lineage

Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › eurosids II › Brassicales › Brassicaceae › Arabidopsis

Protein attributes

Sequence length	1219 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Evidence at transcript level.

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	response to auxin stimulus Inferred from mutant phenotype. Source: TAIR vegetative to reproductive phase transition Inferred from mutant phenotype. Source: TAIR xylem and phloem pattern formation Inferred from mutant phenotype. Source: TAIR
Cellular component	cell wall Inferred from direct assay. Source: TAIR plasma membrane Inferred from direct assay. Source: TAIR
Molecular function	protein binding Inferred from physical interaction. Source: IntAct
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q8L5Y6-1 [UniParc]. Last modified October 1, 2002. Version 1. Checksum: B0F5769754DE6040	FASTA	1,219	134,897
	10 20 30 40 50 60 MANLQVSGIL EKFQMTGKDK DYRYMATSDL LNELNKDSFK IDLDLEVRLS SIILQQLDDV 70 80 90 100 110 120 AGDVSGLAVK CLAPLVKKVG EERIVEMTNK LCDKLLHGKD QHRDTASIAL RTVVAQIAPT 130 140 150 160 170 180 LAPSILVTLT PQMIGGISGQ GMSSGIKCEC LEIMCDVVQK YGSLMTDDHE KLLNTLLLQL 190 200 210 220 230 240 GCNQATVRKK TVTCIASLAS SLSDDLLAKA TVEVVKNLSN RNAKSEITRT NIQMIGALCR 250 260 270 280 290 300 AVGYRFGTHL GNTVPVLINY CTSASENDEE LREYSLQALE SFLLRCPRDI SPYCDEILNL 310 320 330 340 350 360 TLEYISYDPN FTDNMEEDTD NETLEDEEDD ESANEYTDDE DASWKVRRAA AKCLAGLIVS 370 380 390 400 410 420 RSEMLTKVYQ EACPKLIDRF KEREENVKMD VFNTFIDLLR QTGNVTKGQT DTDESSPKWL 430 440 450 460 470 480 LKQEVSKIVK SINRQLREKS VKTKVGAFSV LRELVVVLPD CLADHIGSLV PGIERALNDK 490 500 510 520 530 540 SSTSNLKIEA LVFTKLVLAS HAPPVFHPYI KALSSPVLAA VGERYYKVTA EALRVCGELV 550 560 570 580 590 600 RVVRPSTAGM GFDFKPFVHP IYNAIMSRLT NQDQDQEVKE CAITCMGLVI STFGDQLRAE 610 620 630 640 650 660 LPSCLPVLVD RMGNEITRLT AVKAFSVIAT SPLHINLSCV LDHLIAELTG FLRKANRVLR 670 680 690 700 710 720 QATLITMNTL VTAYGDKIGS EAYEVILVEL SSLISVSDLH MTALALELCC TLMTGKSCSE 730 740 750 760 770 780 NISLAVRNKV LPQALTLVKS PLLQGQALLD LQKFFEALVY HANTSFYTLL ESLLSCAKPS 790 800 810 820 830 840 PQSGGVPKQA LYSIAQCVAV LCLAAGDKNC SSTVKMLMEI LKDDSGTNSA KQHLALLSLG 850 860 870 880 890 900 EIGRRKDLSA HAGIETIVIE SFQSPFEEIK SAASYALGNI AVGNLSNYLP FILDQIDNQQ 910 920 930 940 950 960 KKQYILLHSL KEVIVRQSVD KADFQNSSVE KILALLFNHC ESEEEGVRNV VAECLGKMAL 970 980 990 1000 1010 1020 IEPEKLVPAL QVRTTSPAAF TRATVVTAVK YSVVERPEKL DEIIFPQISS FLMLIKDGDR 1030 1040 1050 1060 1070 1080 HVRRAAVSAL STFAHYKPNL IKGLLPELLP LLYDQTVIKK ELIRTVDLGP FKHVVDDGLE 1090 1100 1110 1120 1130 1140 LRKAAFECVF TLVDSCLDQV NPSSFIVPFL KSGLEDHYDL KMLCHLILSL LADKCPSAVL 1150 1160 1170 1180 1190 1200 AVLDSLVEPL HKTISFKPKQ DAVKQEHDRN EDMIRSALRA ISSLDRINGV DYSHKFKGLM 1210 GDMKRSVPLW EKFQTIRNE

References

[1]

Nguyen M., Karlin-Neumann G., Southwick A., Lam B., Miranda M., Palm C.J., Bowser L., Jones T., Banh J., Carninci P., Chen H., Cheuk R., Chung M.K., Hayashizaki Y., Ishida J., Kamiya A., Kawai J., Kim C. , Lin J., Liu S.X., Narusaka M., Pham P.K., Sakano H., Sakurai T., Satou M., Seki M., Shinn P., Yamada K., Shinozaki K., Ecker J., Theologis A., Davis R.W. Submitted (APR-2002) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.

[2]

"Arabidopsis ORF clones." Cheuk R., Chen H., Kim C.J., Shinn P., Bowser L., Carninci P., Dale J.M., Hayashizaki Y., Ishida J., Jones T., Kamiya A., Karlin-Neumann G., Kawai J., Lam B., Lin J., Miranda M., Narusaka M., Nguyen M. , Onodera C.S., Palm C.J., Quach H.L., Sakurai T., Satou M., Seki M., Southwick A., Toriumi M., Wong C., Wu H.C., Yamada K., Yu G., Shinozaki K., Davis R.W., Theologis A., Ecker J.R. Submitted (AUG-2003) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.

Cross-references

Sequence databases
EMBLGenBankDDBJ	AY099857 mRNA. Translation: AAM20708.1. BT010134 mRNA. Translation: AAQ22603.1.
IPI	IPI00524474.
RefSeq	NP_178360.2.
UniGene	At.41482
3D structure databases
ModBase	Search...
Protein-protein interaction databases
IntAct	Q8L5Y6. 1 interaction.
Proteomic databases
PRIDE	Q8L5Y6.
Genome annotation databases
GeneID	814786.
GenomeReviews	Gene locus AT2G02560 in contig CT485783_GR.
NMPDR	fig|3702.1.peg.7850.
Organism-specific databases
TAIR	At2g02560.
Phylogenomic databases
OMA	Q8L5Y6. MLEFFQA.
Family and domain databases
InterPro	IPR011989. ARM-like. IPR000357. HEAT. IPR013932. TATA_bd_TIP120. [Graphical view]
Gene3D	G3DSA:1.25.10.10. ARM-like. 1 hit.
Pfam	PF02985. HEAT. 1 hit. PF08623. TIP120. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q8L5Y6_ARATH

Accession

Primary (citable) accession number: Q8L5Y6

Entry history

Integrated into UniProtKB/TrEMBL:	October 1, 2002
Last sequence update:	October 1, 2002
Last modified:	June 16, 2009
This is version 40 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)