Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

Q8L4L4 (RL52_ORYSJ) Reviewed, UniProtKB/Swiss-Prot

Last modified April 16, 2014. Version 51. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
60S ribosomal protein L5-2
Gene names
Name:RPL5B
Ordered Locus Names:Os01g0896700, LOC_Os01g67134
ORF Names:P0674H09.11, P0696G06.29
OrganismOryza sativa subsp. japonica (Rice) [Reference proteome]
Taxonomic identifier39947 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza

Protein attributes

Sequence length304 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

This protein binds 5S RNA By similarity. HAMAP-Rule MF_01337_A

Sequence similarities

Belongs to the ribosomal protein L18P family.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 30430460S ribosomal protein L5-2 HAMAP-Rule MF_01337_A
PRO_0000131448

Experimental info

Sequence conflict1 – 44MSLQ → M in BAD82173. Ref.1
Sequence conflict561V → VVRF in BAD82173. Ref.1

Sequences

Sequence LengthMass (Da)Tools
Q8L4L4 [UniParc].

Last modified October 1, 2002. Version 1.
Checksum: 6C0307C860FB6905

FASTA30434,663
        10         20         30         40         50         60 
MSLQGGFVKT QKTHAYFKRF QVKFKRRRQG KTDYRARIRL TNQDKNKYNT PKYRFVTNKD 

        70         80         90        100        110        120 
ITAQIVYATI AGDIVMAAAY SHELPRYGLE VGLTNYAAAY CTGLLLARRV LTLRGLDQEY 

       130        140        150        160        170        180 
EGNVEATGED YYVEPADERR PFRALLDVGL IRTTTGNRVF GALKGALDGG LDIPHSDKRF 

       190        200        210        220        230        240 
AGFKKDEKQL DSDIHRKYIY GGHVADYMRS MAEEEPEKFQ AHFSEYLKKG IDADGMESLY 

       250        260        270        280        290        300 
KKVHAAIRAD PTMAKSTKKE PATHKRYNLK KLTYEQRKAS LVERLNALNS SAGADDDDEE 


EDDE 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AP003316 Genomic DNA. Translation: BAC06272.1.
AP003349 Genomic DNA. Translation: BAD82173.1.

3D structure databases

ProteinModelPortalQ8L4L4.
SMRQ8L4L4. Positions 15-247.
ModBaseSearch...
MobiDBSearch...

Proteomic databases

PaxDbQ8L4L4.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Organism-specific databases

GrameneQ8L4L4.

Phylogenomic databases

eggNOGCOG0256.

Family and domain databases

HAMAPMF_01337_A. Ribosomal_L18_A.
InterProIPR005485. Rbsml_L5_euk/L18_arc.
IPR025607. Rbsml_L5e/L18P_C.
IPR005484. Ribosomal_L18/L5.
[Graphical view]
PANTHERPTHR23410. PTHR23410. 1 hit.
PfamPF14204. Ribosomal_L18_c. 1 hit.
PF00861. Ribosomal_L18p. 1 hit.
[Graphical view]
PRINTSPR00058. RIBOSOMALL5.
ProtoNetSearch...

Entry information

Entry nameRL52_ORYSJ
AccessionPrimary (citable) accession number: Q8L4L4
Secondary accession number(s): Q5N8N3
Entry history
Integrated into UniProtKB/Swiss-Prot: November 23, 2004
Last sequence update: October 1, 2002
Last modified: April 16, 2014
This is version 51 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Oryza sativa (rice)

Index of Oryza sativa entries and their corresponding gene designations

Ribosomal proteins

Ribosomal proteins families and list of entries