Reviewed,
UniProtKB/Swiss-Prot Q8KTB2 (EFG_RICTY)
Last modified
November 24, 2009.
Version 45.
History...
Clusters with 100%,
90%,
50% identity |
Documents (2) |
Third-party data |
Customize display | text xml rdf/xml gff fasta |
Names and origin
| Protein names | Recommended name: Elongation factor G Short name=EF-G | ||||
| Gene names |
| ||||
| Organism | Rickettsia typhi [Complete proteome] [HAMAP] | ||||
| Taxonomic identifier | 785 [NCBI] | ||||
| Taxonomic lineage | Bacteria › Proteobacteria › Alphaproteobacteria › Rickettsiales › Rickettsiaceae › Rickettsieae › Rickettsia › typhus group |
Protein attributes
| Sequence length | 699 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is not processed. |
| Protein existence | Inferred from homology. |
General annotation (Comments)
| Function | This protein promotes the GTP-dependent translocation of the nascent protein chain from the A-site to the P-site of the ribosome. HAMAP MF_00054 |
| Subcellular location | |
| Sequence similarities | Belongs to the GTP-binding elongation factor family. EF-G/EF-2 subfamily. |
Ontologies
| Keywords | |
|---|---|
| Biological process | Protein biosynthesis |
| Cellular component | Cytoplasm |
| Ligand | GTP-binding Nucleotide-binding |
| Molecular function | Elongation factor |
| Technical term | Complete proteome |
| Gene Ontology (GO) | |
| Biological process | translational elongation Inferred from electronic annotation. Source: HAMAP |
| Cellular component | cytoplasm Inferred from electronic annotation. Source: UniProtKB-SubCell |
| Molecular function | GTP binding Inferred from electronic annotation. Source: HAMAP GTPase activityInferred from electronic annotation. Source: InterPro translation elongation factor activityInferred from electronic annotation. Source: HAMAP |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 699 | 699 | Elongation factor G HAMAP MF_00054 | PRO_0000091205 | |||||
Regions | |||||||||
| Nucleotide binding | 17 – 24 | 8 | GTP By similarity | ||||||
| Nucleotide binding | 81 – 85 | 5 | GTP By similarity | ||||||
| Nucleotide binding | 135 – 138 | 4 | GTP By similarity | ||||||
Experimental info | |||||||||
| Sequence conflict | 263 | 1 | F → L in AAM90925. Ref.1 | ||||||
| Sequence conflict | 306 | 1 | T → L in AAM90925. Ref.1 | ||||||
| Sequence conflict | 641 | 1 | S → K in AAM90925. Ref.1 | ||||||
Sequences
| ||||||||||||||||||
References
| « Hide 'large scale' references | |
| [1] | "Proliferation and deterioration of Rickettsia palindromic elements." Amiri H., Alsmark C.M., Andersson S.G.E. Mol. Biol. Evol. 19:1234-1243(2002) [PubMed: 12140235] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA]. |
| [2] | "Complete genome sequence of Rickettsia typhi and comparison with sequences of other Rickettsiae." McLeod M.P., Qin X., Karpathy S.E., Gioia J., Highlander S.K., Fox G.E., McNeill T.Z., Jiang H., Muzny D., Jacob L.S., Hawes A.C., Sodergren E., Gill R., Hume J., Morgan M., Fan G., Amin A.G., Gibbs R.A. Weinstock G.M.J. Bacteriol. 186:5842-5855(2004) [PubMed: 15317790] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC VR-144 / Wilmington. |
Cross-references
Sequence databases | |
|---|---|
| AF502176 Genomic DNA. Translation: AAM90925.1. AE017197 Genomic DNA. Translation: AAU03607.1. | |
| RefSeq | YP_067089.1. |
3D structure databases | |
| ModBase | Search... |
Genome annotation databases | |
| GeneID | 2958765. |
| GenomeReviews | Gene locus RT0121 in contig AE017197_GR. |
| KEGG | rty:RT0121. |
Organism-specific databases | |
| CMR | Search... |
Phylogenomic databases | |
| HOGENOM | Q8KTB2. |
| OMA | QEPGKGY |
Enzyme and pathway databases | |
| BioCyc | RTYP257363:RT0121-MON. |
Family and domain databases | |
| HAMAP | MF_00054. [Tree] |
| InterPro | IPR009022. Elongation_fac_G/III/V. IPR000795. ProtSyn_GTP_bd. IPR020568. Ribosomal_S5_D2-typ_fold. IPR014721. Ribosomal_S5_D2-typ_fold_subgr. IPR005225. Small_GTP_bd. IPR004540. Transl_elong_EFG/EF2. IPR000640. Transl_elong_EFG/EF2_C. IPR005517. Transl_elong_EFG/EF2_IV. IPR004161. Transl_elong_EFTu/EF1A_2. IPR009000. Transl_elong_init/rib_B-barrel. [Graphical view] |
| Gene3D | G3DSA:3.30.230.10. Ribosomal_S5_D2-type_fold. 1 hit. |
| Pfam | PF00679. EFG_C. 1 hit. PF03764. EFG_IV. 1 hit. PF00009. GTP_EFTU. 1 hit. PF03144. GTP_EFTU_D2. 1 hit. [Graphical view] |
| PRINTS | PR00315. ELONGATNFCT. |
| SMART | SM00838. EFG_C. 1 hit. SM00889. EFG_IV. 1 hit. [Graphical view] |
| TIGRFAMs | TIGR00484. EF-G. 1 hit. TIGR00231. small_GTP. 1 hit. |
| PROSITE | PS00301. EFACTOR_GTP. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Entry information
| Entry name | EFG_RICTY | ||||||||
| Accession | Primary (citable) accession number: Q8KTB2 Secondary accession number(s): Q68XN5 | ||||||||
| Entry history |
| ||||||||
| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation project | HAMAP (High-quality Automated and Manual Annotation of microbial Proteomes) | ||||||||
Relevant documents
| Rickettsia typhi Rickettsia typhi (strain Wilmington): entries and gene names |
| SIMILARITY comments Index of protein domains and families |

Clusters with


