Unreviewed, UniProtKB/TrEMBL Q8KKZ2 (Q8KKZ2_RHIEC)

Names and origin

Protein names

Submitted name:
    Pectate lyase secreted protein EMBL AAM54988.2

Gene names

Ordered Locus Names:

RHE_PD00062

Encoded on

Plasmid sym p42d

Organism

Rhizobium etli (strain CFN 42 / ATCC 51251) [Complete proteome] [HAMAP]

Taxonomic identifier

347834 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Rhizobiaceae › Rhizobium/Agrobacterium group › Rhizobium

Protein attributes

Sequence length	304 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Predicted.

Ontologies

Keywords
Molecular function	Lyase
Technical term	Complete proteome Plasmid
Gene Ontology (GO)
Cellular component	extracellular region Inferred from electronic annotation. Source: InterPro
Molecular function	pectate lyase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q8KKZ2-1 [UniParc]. Last modified April 4, 2006. Version 2. Checksum: 56AB422792AEB492	FASTA	304	32,596
	10 20 30 40 50 60 MCGVDGQRPI DFDRTSRFDL ESDCLGGSNR ADTDFTTIRT RKVSPFEDFS GNPPTLTSYV 70 80 90 100 110 120 PNSRETSENG MDSDPKDLLR KHINWQSDSK KVDPSDEKQA TTLQTTTEKP DLSKEGSVIV 130 140 150 160 170 180 VNEPIVVDGG VFDGKGATYT ASSKLGDGGQ SETQSPLFIL KNGATLKNVD LGENGADGIH 190 200 210 220 230 240 VYDGATLENV NWQNVGEDAL TVKSAGDITI IGGSAKGATD KIFQINADTR FYLKDFVADG 250 260 270 280 290 300 FTTLVRTNGG KQIDADVTID GGAFSHGSNV FRTDSSLASV TFLSDITLDD VKNWTRVGDN QSGV

References

[1]

"The mosaic structure of the symbiotic plasmid of Rhizobium etli CFN42 and its relation to other symbiotic genome compartments." Gonzalez V., Bustos P., Ramirez-Romero M.A., Medrano-Soto A., Salgado H., Hernandez-Gonzalez I., Hernandez-Celis J.C., Quintero V., Moreno-Hagelsieb G., Girard L., Rodriguez O., Flores M., Cevallos M.A., Collado-Vides J., Romero D., Davila G. Genome Biol. 4:RESEARCH36.1-RESEARCH36.13(2003) [PubMed: 12801410] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

[2]

"The partitioned Rhizobium etli genome: genetic and metabolic redundancy in seven interacting replicons." Gonzalez V., Santamaria R.I., Bustos P., Hernandez-Gonzalez I., Medrano-Soto A., Moreno-Hagelsieb G., Janga S.C., Ramirez M.A., Jimenez-Jacinto V., Collado-Vides J., Davila G. Proc. Natl. Acad. Sci. U.S.A. 103:3834-3839(2006) [PubMed: 16505379] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBLGenBankDDBJ	U80928 Genomic DNA. Translation: AAM54988.2.
RefSeq	NP_659975.2.
3D structure databases
ModBase	Search...
Protein family/group databases
CAZy	PL3. Polysaccharide Lyase Family 3.
Genome annotation databases
GeneID	1005160.
GenomeReviews	Gene locus RHE_PD00062 in contig U80928_GR.
KEGG	ret:RHE_PD00062.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	Q8KKZ2.
OMA	Q8KKZ2. ETSENGM.
Family and domain databases
InterPro	IPR004898. Pectate_lyase_cat. IPR012334. Pectin_lyas_fold. [Graphical view]
Gene3D	G3DSA:2.160.20.10. Pectin_lyas_fold. 1 hit.
Pfam	PF03211. Pectate_lyase. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q8KKZ2_RHIEC

Accession

Primary (citable) accession number: Q8KKZ2

Entry history

Integrated into UniProtKB/TrEMBL:	October 1, 2002
Last sequence update:	April 4, 2006
Last modified:	June 16, 2009
This is version 27 of the entry and version 2 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)