Q8KKH9 (Q8KKH9_BACCI) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Heparinase EMBL BAB91369.1

Gene names

Name:

hep EMBL BAB91369.1

Organism

Bacillus circulans EMBL BAB91369.1

Taxonomic identifier

1397 [NCBI]

Taxonomic lineage

Bacteria › Firmicutes › Bacillales › Bacillaceae › Bacillus

Protein attributes

Sequence length	1050 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Predicted

Ontologies

Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Cellular component	extracellular region Inferred from electronic annotation. Source: InterPro
Molecular function	carbohydrate binding Inferred from electronic annotation. Source: InterPro carbon-oxygen lyase activity, acting on polysaccharides Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q8KKH9 [UniParc]. Last modified October 1, 2002. Version 1. Checksum: A49239AB51D575DA	FASTA	1,050	116,490
	10 20 30 40 50 60 MRKTTIVRWT AAVLFVAVPA VAGVSVQLAK RTQPAATHAT AAAEKLPGPP VAATQAVAIR 70 80 90 100 110 120 DDGSFKKSES FEGGQIPAAW QTDGGGQLSL SAAHYKHGRQ SLQWNWAQGS RLLVIKPPNL 130 140 150 160 170 180 EQAGASKRGG IKLWLYNEKA VDGKATFRLG SEQEINSNNP RYVFEIGINF TGWRGMWIQF 190 200 210 220 230 240 REDGAYDGYK GDGKAPLEVM EIIPPAAAPQ GSLFFDVVEF EGTIPATRST DYQVPYDRKR 250 260 270 280 290 300 SNDGMGGTWD RSYYWSQMKP DLPLADRITP EQSRAFETIA KRYEGWIYGE HPDLTREPLR 310 320 330 340 350 360 IRNSALQSFI AKGLQKYAQL GLNRDGNGYI TGPPLFSSRS THGPEFGEDV AKTIFLPLVF 370 380 390 400 410 420 DYKINGRQES KNKVLDLFDY FHDQGWADGS GLETLDHETN RTNGYFHAVY LMRKELQESG 430 440 450 460 470 480 RLDRELATVR WFTNFGKTYI ADPGETTADE IRTKFMYELL YVLALDDGPA KVREMQSLLR 490 500 510 520 530 540 WMNHALAVAT GFAGTIKDDF MGFHHRGVYM SAYARQAFHM AALIAYLLHD TPFALSKQST 550 560 570 580 590 600 DNMPKRAADF SDGGEQIRRA GGLSGRFPAK DGVANEIVPA YAYMALASEP VDREMAGAFM 610 620 630 640 650 660 RLWDPSSPYL KQGLFPKADS GDVSYLDTIG GLQLALKLAD QGFAPEKSPQ FWMKPSAAFA 670 680 690 700 710 720 VMRRDDWAVS VKGWSQYVFD FESQAPKAAD SAQKALAGQN VFGRYASYGA MQVMAAGDPI 730 740 750 760 770 780 NKANNGYGLD NGWDWNRWPG ATTIRLPWER LGVSKDRPQT RSFTDQTFVG GVESEGKDGI 790 800 810 820 830 840 FAMKLHDTVY DKSFRAEKSV FFLDNEVIAL GSGIHNDDGA HSTETTLFQS YMKDTGMPIR 850 860 870 880 890 900 TGSAGSAETI AEFPYRRDFK PKENVWLMDP YGNDISYRCG GCALNEASSR RPIRAVKKRR 910 920 930 940 950 960 PAATAPPGSI TARSRRVRAT NMRCSCRLLP SRCGNTRSRR AMRCFEKTAR LISSDMRRSA 970 980 990 1000 1010 1020 RSDTSFSMRR RKCRAASSGK QAGRRSLWKN KRRTESFSAS PIRICACPSF PTKEWTTASA 1030 1040 1050 DAWNGGDGAG RAERKLAAGT AASGRHPSDG

References

[1]

"Cloning, sequencing, and expression of the gene from bacillus circulans that codes for a heparinase that degrades both heparin and heparan sulfate." Yoshida E., Arakawa S., Matsunaga T., Toriumi S., Tokuyama S., Morikawa K., Tahara Y. Biosci. Biotechnol. Biochem. 66:1873-1879(2002) [PubMed: 12400686] [Abstract] Cited for: NUCLEOTIDE SEQUENCE.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AB073927 Genomic DNA. Translation: BAB91369.1.
3D structure databases
HSSP	HSSP built from PDB template 1HN0 based on UniProtKB P59807.
ProteinModelPortal	Q8KKH9.
ModBase	Search...
Protein family/group databases
CAZy	PL8. Polysaccharide Lyase Family 8.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Enzyme and pathway databases
BRENDA	4.2.2.7. 1207.
Family and domain databases
InterPro	IPR008929. Chondroitin_lyas. IPR008979. Galactose-bd-like. IPR011013. Glyco_hydro-type_carb-bd. IPR014718. Glyco_hydro-type_carb-bd_sub. IPR003159. Lyase_8_central_dom. IPR012329. Lyase_8_N. IPR015177. Lyase_catalyt. IPR015176. Lyase_N. [Graphical view]
Gene3D	G3DSA:2.70.98.10. Glyco_hydro_42_D5. 1 hit. G3DSA:1.50.10.100. Lyase_8_N. 1 hit. G3DSA:2.60.120.410. Lyase_N. 1 hit.
Pfam	PF02278. Lyase_8. 1 hit. PF09093. Lyase_catalyt. 1 hit. PF09092. Lyase_N. 1 hit. [Graphical view]
SUPFAM	SSF48230. Chondroitin_lyas. 1 hit. SSF49785. Gal_bind_like. 1 hit. SSF74650. Gal_mut_like. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q8KKH9_BACCI

Accession

Primary (citable) accession number: Q8KKH9

Entry history

Integrated into UniProtKB/TrEMBL:	October 1, 2002
Last sequence update:	October 1, 2002
Last modified:	January 11, 2011
This is version 29 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)