Skip Header

 
Contribute Send feedback
Read comments (0) or add your own

Reviewed, UniProtKB/Swiss-Prot Q8KA80 (EFP_BUCAP)

Last modified November 24, 2009. Version 44. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents

Names and origin

Protein namesRecommended name:
    Elongation factor P
      Short name=EF-P
Gene names
Name: efp
Ordered Locus Names: BUsg_021
OrganismBuchnera aphidicola subsp. Schizaphis graminum [Complete proteome] [HAMAP]
Taxonomic identifier98794 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeBuchnera

Protein attributes

Sequence length187 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existenceInferred from homology.

General annotation (Comments)

Function

Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase By similarity.

Pathway

Protein biosynthesis; polypeptide chain elongation. HAMAP MF_00141

Subcellular location

Cytoplasm.

Sequence similarities

Belongs to the elongation factor P family.

Ontologies

Keywords
   Biological processProtein biosynthesis
   Cellular componentCytoplasm
   Molecular functionElongation factor
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processtranslational elongation

Inferred from electronic annotation. Source: HAMAP

   Cellular componentcytoplasm

Inferred from electronic annotation. Source: UniProtKB-SubCell

   Molecular functiontranslation elongation factor activity

Inferred from electronic annotation. Source: HAMAP

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 187187Elongation factor P HAMAP MF_00141
PRO_0000094216

Sequences

Sequence LengthMass (Da)Tools
Q8KA80-1 [UniParc].

Last modified October 1, 2002. Version 1.
Checksum: 86C6C324DACF059D

FASTA18721,469
        10         20         30         40         50         60 
MRVYHSNNFR SGRKIIFEKE PCLIESSEFV KPGKGQSFVR VKLRKLLTKQ LIEKTFKSTD 

        70         80         90        100        110        120 
SLEIADVSEY TLSYLYNDGH FWYFINNNFE ELSVDKKIVG VNKKWLSEQD TCVITFWNNQ 

       130        140        150        160        170        180 
AISITPNIFV ELKVIDTEIA LKSDTINTTT KLATLSTGAI LKVPLFIQIG SLIKVDTRSG 


EYVSRIK 

« Hide

References

[1]"50 million years of genomic stasis in endosymbiotic bacteria."
Tamas I., Klasson L., Canbaeck B., Naeslund A.K., Eriksson A.-S., Wernegreen J.J., Sandstroem J.P., Moran N.A., Andersson S.G.E.
Science 296:2376-2379(2002) [PubMed: 12089438] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

AE013218 Genomic DNA. Translation: AAM67593.1.
RefSeqNP_660382.1.

3D structure databases

ModBaseSearch...

Genome annotation databases

GeneID1005837.
GenomeReviewsGene locus BUsg_021 in contig AE013218_GR.
KEGGbas:BUsg021.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMQ8KA80.
OMAMATYSSN

Enzyme and pathway databases

BioCycBAPH198804:BUSG021-MON.

Family and domain databases

HAMAPMF_00141.
[Tree]
InterProIPR015365. Elong-fact-P_C.
IPR012340. NA-bd_OB-fold.
IPR016027. NA-bd_OB-fold-like.
IPR020599. Transl_elong_fac_P/YeiP.
IPR013185. Transl_elong_KOW-like.
IPR001059. Transl_elong_P/YeiP_cen.
IPR013852. Transl_elong_P/YeiP_CS.
IPR011768. Transl_elongation_fac_P.
IPR014722. Transl_SH3-like_sub.
IPR008991. Translation_prot_SH3-like.
[Graphical view]
Gene3DG3DSA:2.40.50.140. OB_NA_bd_sub. 2 hits.
G3DSA:2.30.30.30. Ribosomal_L2. 1 hit.
PfamPF01132. EFP. 1 hit.
PF08207. EFP_N. 1 hit.
PF09285. Elong-fact-P_C. 1 hit.
[Graphical view]
PIRSFPIRSF005901. EF-P. 1 hit.
SMARTSM00841. Elong-fact-P_C. 1 hit.
[Graphical view]
TIGRFAMsTIGR00038. efp. 1 hit.
PROSITEPS01275. EFP. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameEFP_BUCAP
AccessionPrimary (citable) accession number: Q8KA80
Entry history
Integrated into UniProtKB/Swiss-Prot: November 8, 2002
Last sequence update: October 1, 2002
Last modified: November 24, 2009
This is version 44 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation projectHAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)

Relevant documents

Buchnera aphidicola (subsp. Schizaphis graminum)

Buchnera aphidicola (subsp. Schizaphis graminum): entries and gene names

PATHWAY comments

Index of metabolic and biosynthesis pathways

SIMILARITY comments

Index of protein domains and families

Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents